Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14824
- Subject:
- NR_148554.2
- Aligned Length:
- 2599
- Identities:
- 605
- Gaps:
- 1970
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGGCCTGACGGTTGCTAGGGTGACAGGGACACAACATGGCGGCGGGATCTCTAACGCTCTCCTTCGAGGGACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCACGGAGATCCTAGTGCGGGACCCCGCCTCAGGGAAGTGGAAAGCAGGGGGACAACCTTCCTGCTTCTTTCT 148
Query 1 ------------------------------------------------ATGAAGAACTATAAAGCAATTGGCAA 26
||||||||||||||||||||||||||
Sbjct 149 TTTCCGTCCAGTGTCGGCAAGGGGTTGTCACCGGCTTCCGCATCCAAGATGAAGAACTATAAAGCAATTGGCAA 222
Query 27 AATAGGAGAGGGAACGTTTTCTGAAGTTATGAAGATGCAAAGCCTGAGAGATGGAAACTACTATGCATGTAAAC 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AATAGGAGAGGGAACGTTTTCTGAAGTTATGAAGATGCAAAGCCTGAGAGATGGAAACTACTATGCATGTAAAC 296
Query 101 AAATGAAGCAGCGCTTTGAAAG----TATTGAGCAAGTCAACAACC--------------TACGAGAGAT---- 152
|||||||||||||||||||||| .|||..||..| ||| |.||||.|||
Sbjct 297 AAATGAAGCAGCGCTTTGAAAGCCGAAATTCCGCTGG------ACCAGGCACTTTTGGTATGCGAGGGATTTGG 364
Query 153 --CCAAGCACTGAGGCGCCTGAAT---CCGCACC------CAAACAT-TC--TTATGT---TGCATGAAGTGGT 209
..||||| |..||.|.|| ||.|||| .||.||| || |||.|| .|||
Sbjct 365 CAGAAAGCA-----GATCCAGGATGTACCTCACCACCAGGAAACCATGTCCGTTAGGTAACCGCA--------- 424
Query 210 TTTTGACA---GAAAATCTGGTTCT-CTTGCACTAATATGTGAACTTATGGACATGAATATTTATGAGCTAATA 279
.||| .||||||.|.|||| |||| ||||| ||| ||
Sbjct 425 ----CACACGCAAAAATCCGTTTCTGCTTG--------------CTTAT---CAT---------TG-------- 460
Query 280 CGAGGGAGAAGATACCCATTATCAGAAAAAAAAATTATGCACTATATGTACCAGTTATGTAAGTCCCTGGATCA 353
.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 ---TGGAGAAGATACCCATTATCAGAAAAAAAAATTATGCACTATATGTACCAGTTATGTAAGTCCCTGGATCA 531
Query 354 TATTCACAGAAATGGAATATTTCACAGAGATGTAAAACCAGAAAATATACTAATAAAGCAGGATGTCCTGAAAT 427
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 532 TATTCACAGAAATGGAATATTTCACAGAGATGTAAAACCAGAAAATATACTAATAA---AGGATGTCCTGAAAT 602
Query 428 TAGGGGACTTTGGCTCCTGCCGGAGTGTCTATTCCAAGCAGCCGTACACGGAATACATCTCCACCCGCTGGTAC 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 TAGGGGACTTTGGCTCCTGCCGGAGTGTCTATTCCAAGCAGCCGTACACGGAATACATCTCCACCCGCTGGTAC 676
Query 502 CGGGCCCCGGAGTGTCTCCTCACTGATGGGTTCTACACGTACAAGATGGACCTGTGGAGCGCCGGCTGTGTGTT 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 CGGGCCCCGGAGTGTCTCCTCACTGATGGGTTCTACACGTACAAGATGGACCTGTGGAGCGCCGGCTGTGTGTT 750
Query 576 CTACGAGATCGCCAGTCTGCAGCCCCTCTTTCCTGGAGTAAATGAACTGGACCAAATCTCAAAAATCCACGATG 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 CTACGAGATCGCCAGTCTGCAGCCCCTCTTTCCTGGAGTAAATGAACTGGACCAAATCTCAAAAATCCACGATG 824
Query 650 TCATCGGCACACCCGCTCAGAAGATCCTCACCAAGTTCAAACAG------------------------------ 693
|||||||||||||||||||||||||||||||||||||||||||.
Sbjct 825 TCATCGGCACACCCGCTCAGAAGATCCTCACCAAGTTCAAACAAACCCAGAACGGAAGCGAGGATGAGGCCTCA 898
Query 694 -------------------------------------------------------------------------- 693
Sbjct 899 GCCGTCCTCCTCCCCATTCAAACACGTTCATCCCTCAACCCTCTGCTGAGCACCTGCATGCTGCCCGGCCGCAG 972
Query 694 -------------------------------------------------------------------------- 693
Sbjct 973 TGTCACCCTTCTTGTGTGAGCCTACCCTCATCCACCCACCTCACCCTCCTGACCTTAAAGAAGACACCGGGCAG 1046
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1047 AAGCACAGGGGAGCCCAGTCACACCCCACACTGGCGGGGGCAGGCCTTGCAGGGAGAAGCAGTAAGCAGCCATC 1120
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1121 TCCATCAGCCATTTCCATCTGGCACTCAGACGTGCACGTCTTCGTGTGACAGGCGGCAGCAGTGCGACCGTGAC 1194
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1195 CTCCCATCTGCTCTGCTGTCCCCACACCTGCGGTGCAGCCAGCCTGCCACAAGGCAGCTAGAGTCCAGCTAGAC 1268
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1269 CCACCCCTGGCACGGCCGACCTCTTCCTGGCTTCTTCTGGGCCTAATCCCCGTGCATTCTCCAACGCCAGAAGT 1342
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1343 GTAAGAAAGTGCAAGGCAACAAGTGAGAAGAGCAAACCCAAATCGTACCAGGGAAGCTAGTCTTTCCAGGGCAC 1416
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1417 CTGAGTGAGGGCATGACCAGCCTTGACGCTGCCTCGCTACCATCTGCCCAGGGCCTGCTGAATGCTTGAGTCCA 1490
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1491 TGGTGACAGTGGTGGGAACAGTTACGAGGCAGTTAGATTTTGGAAGTCATGTTGGCCCACTTGGCTACAGAGCA 1564
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1565 GTCTTAGGAACAGCACCATAAAAATAAAGACTTATTCCTGACACACATGCATCTAGAGTAAACTGGGGCGTATC 1638
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1639 TGACAGCGTTAGTACAGTGATGGCCAAATGCAAACTGCATTCCAGAACCAGCGAAGGGTGACAGACTGGGCTGA 1712
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1713 GGCAGAGCTAGGACTAACCATCTCGAGTGATGCCATCTCGGGGCCAACAAAAGTTTTGGACACGGCTGGATCAT 1786
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1787 CTGACCAAACTGCTCAAATCTTTACACAATTATTGTCCTGGTATTAAACTTTCACCTGCCACTTCCAACAAACA 1860
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1861 GGAGACAGAATAAGGAGATGACCAGGAAGATGGCTGGATTAAGAATTCTAGACTTGGCCGGGTGCGGTGGCTCA 1934
Query 694 -------------------------------------------------------------------------- 693
Sbjct 1935 CACCTGTAATCCTAGCATCTTGGGAGGCTGAGGCAGGAGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTAG 2008
Query 694 -------------------------------------------------------------------------- 693
Sbjct 2009 GCAACATAAGGAGACCCCATCTCTACAAAATATCAAAAAATTACCCAGGTATGGTGGCACACACGTGTGATTCC 2082
Query 694 -------------------------------------------------------------------------- 693
Sbjct 2083 AGCTACTCGGGAGGCTGAGATGGGAGGATCACTTGAACCCAGGAGGTTGGGGCTACAATGAGCTATGATCGCAC 2156
Query 694 -------------------------------------------------------------------------- 693
Sbjct 2157 CACTTCATTCCAGCCTGGATGACAGAAGACTCACTCCATAGTTCATGGCCCCGTGATCCAGAGTCCCTGCTGGC 2230
Query 694 -------------------------------------------------------------------------- 693
Sbjct 2231 GCCTTCGAGTGGGGCAGGCTGAGAACTCAAGCTGTAACTAATGTCTCCTCCGAAGAAAACTAAACCGAGGGCTG 2304
Query 694 -------------------------------------------------------------------------- 693
Sbjct 2305 AGCTGATGTGAAGTTTTCCGTGGCTGCATTCATACAAATGGTGAAAATGTAGCATACCTCCCCTCAAAAGCCTG 2378
Query 694 -------------------------------------------------------------------------- 693
Sbjct 2379 AAAGTAAAGACATGCCCCCAATTTAATGTGATGAATTAGAGAAATAGGTTTCAGACACTTCATGGTTTAAAGTC 2452
Query 694 -------------------------------------------------------------------------- 693
Sbjct 2453 TCACAAAATAAAGCTTTCGAAGGATCCAGTTGTATATGATTTTTTAAAAAAATAAATAAACATTCTTCTGCTTG 2526
Query 694 --------- 693
Sbjct 2527 GTAGCTGCA 2535
