Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14923
• Subject: NM_032430.2
• Aligned Length: 2412
• Identities: 1575
• Gaps: 474

Alignment

Query    1  ATGACATCGACGGGG--AAGGACGGCGGCG--------------------------------------------  28
            |||.|.||  |||||  |||||.||.||.|                                            
Sbjct    1  ATGTCGTC--CGGGGCCAAGGAGGGAGGTGGGGGCTCTCCCGCCTACCACCTCCCCCACCCCCACCCCCACCCA  72

Query   29  -CGCAGCACGCGCAGTATGTTGGGCCCTACCGGCTGGAGAAGACGCTGGGCAAGGGGCAGACAGGTCTGGTGAA  101
             |.||||||||.||.|||||.||.|||||.|||||||||||||||||||||||.||.||||||||.|||||.||
Sbjct   73  CCCCAGCACGCCCAATATGTGGGCCCCTATCGGCTGGAGAAGACGCTGGGCAAAGGACAGACAGGGCTGGTTAA  146

Query  102  GCTGGGGGTTCACTGCGTCACCTGCCAGAAGGTGGCCATCAAGATCGTCAACCGTGAGAAGCTCAGCGAGTCGG  175
            .||.|||||.||||||.||||..|.||||||||.||||||||||||||.|||||.||||||||....|||||||
Sbjct  147  ACTCGGGGTCCACTGCATCACGGGTCAGAAGGTCGCCATCAAGATCGTGAACCGGGAGAAGCTGTCGGAGTCGG  220

Query  176  TGCTGATGAAGGTGGAGCGGGAGATCGCGATCCTGAAGCTCATTGAGCACCCCCACGTCCTAAAGCTGCACGAC  249
            ||||||||||||||||||||||||||||.||||||||||||||.||.|||||.||.|||||.|||||.||||||
Sbjct  221  TGCTGATGAAGGTGGAGCGGGAGATCGCCATCCTGAAGCTCATCGAACACCCACATGTCCTCAAGCTCCACGAC  294

Query  250  GTTTATGAAAACAAAAAATATTTGTACCTGGTGCTAGAACACGTGTCAGGTGGTGAGCTCTTCGACTACCTGGT  323
            ||.||.||.|||||.|||||||||||||||||.||.||.|||||.||.||.||||||||.||||||||||||||
Sbjct  295  GTCTACGAGAACAAGAAATATTTGTACCTGGTTCTGGAGCACGTCTCGGGGGGTGAGCTATTCGACTACCTGGT  368

Query  324  GAAGAAGGGGAGGCTGACGCCTAAGGAGGCTCGGAAGTTCTTCCGGCAGATCATCTCTGCGCTGGACTTCTGCC  397
            .|||||||||||.||||||||.||||||||.||.|||||||||||.|||||..|.|||||||||||||||||||
Sbjct  369  AAAGAAGGGGAGACTGACGCCCAAGGAGGCCCGAAAGTTCTTCCGCCAGATTGTGTCTGCGCTGGACTTCTGCC  442

Query  398  ACAGCCACTCCATATGCCACAGGGATCTGAAACCTGAAAACCTCCTGCTGGACGAGAAGAACAACATCCGCATC  471
            |||||.|||||||.||||||||.||.||.||.||.||.|||||.||..||||.|||||.||||||||||||||.
Sbjct  443  ACAGCTACTCCATCTGCCACAGAGACCTAAAGCCCGAGAACCTGCTTTTGGATGAGAAAAACAACATCCGCATT  516

Query  472  GCAGACTTTGGCATGGCGTCCCTGCAGGTTGGCGACAGCCTGTTGGAGACCAGCTGTGGGTCCCCCCACTACGC  545
            ||||||||.||||||||||||||||||||.||.||||||||..|||||||||||||.|||||||||||.||.||
Sbjct  517  GCAGACTTCGGCATGGCGTCCCTGCAGGTGGGGGACAGCCTCCTGGAGACCAGCTGCGGGTCCCCCCATTATGC  590

Query  546  CTGCCCCGAGGTGATCCGGGGGGAGAAGTATGACGGCCGGAAGGCGGACGTGTGGAGCTGCGGCGTCATCCTGT  619
            .||.||.||||||||...||||||.||.|||||.|||||...|||.|||.||||||||||.||.||||||||.|
Sbjct  591  GTGTCCAGAGGTGATTAAGGGGGAAAAATATGATGGCCGCCGGGCAGACATGTGGAGCTGTGGAGTCATCCTCT  664

Query  620  TCGCCTTGCTGGTGGGGGCTCTGCCCTTCGACGATGACAACTTGCGACAGCTGCTGGAGAAGGTGAAGCGGGGC  693
            |||||.||||.|||||||||||||||||.||.||.||||||.|.||.||||||||||||||||||||.||||||
Sbjct  665  TCGCCCTGCTCGTGGGGGCTCTGCCCTTTGATGACGACAACCTCCGCCAGCTGCTGGAGAAGGTGAAACGGGGC  738

Query  694  GTGTTCCACATGCCGCACTTTATCCCGCCCGACTGCCAGAGTCTGCT-ACGGGCATGATCGAGGTGGACGCGGC  766
            ||.|||||||||||.|||||.||.||.||.||.||||||||.||.|| |.|||.||||||||.|||||    ||
Sbjct  739  GTCTTCCACATGCCCCACTTCATTCCTCCAGATTGCCAGAGCCTCCTGAGGGGAATGATCGAAGTGGA----GC  808

Query  767  ACG------CGCTCACGCTAGAGCACATTCAGACCACAT--ATGGTATATAGGGGGCAAGAATGAGCCCGAACC  832
            .||      .|||||..||.|||||.||||||| .||||  .|||||..||||.||.||..|.|||||.||.||
Sbjct  809  CCGAAAAAAGGCTCAGTCTGGAGCAAATTCAGA-AACATCCTTGGTACCTAGGCGGGAAACACGAGCCAGACCC  881

Query  833  ------AGAG-CAGCCCATTCCTCGCAAGG------TGCAGATCCGCTCGCTGC---CCAGCCTGGAGGACATC  890
                  .||| ||||||.|..| |||..||      |||.||.|      ||||   |||.|  ||| ||..|.
Sbjct  882  GTGCCTGGAGCCAGCCCCTGGC-CGCCGGGTAGCCATGCGGAGC------CTGCCATCCAAC--GGA-GAGCTG  945

Query  891  GACCCCGACGTGCTGGACAGCAT-GCACTCACTGGGCTGCTTCCGAGACCGCAACAAGCTGCTGCAGGACCT--  961
            |||||||||||.||.||.||||| ||| |||||||||||||||.|.||||||.|.|.|||||..|..||.||  
Sbjct  946  GACCCCGACGTCCTAGAGAGCATGGCA-TCACTGGGCTGCTTCAGGGACCGCGAGAGGCTGCATCGCGAGCTGC  1018

Query  962  GCTGTCCGAGGAGGAGAACCAGGAGAAGATGATTTACTTCCTCCTCCTGGACCGGAAAGAAAGGTACCCGAGCC  1035
            ||.||  ||||||||||||||.||.||||||||.||.|..||.||..||||.|||||.||..||||.||.|||.
Sbjct 1019  GCAGT--GAGGAGGAGAACCAAGAAAAGATGATATATTATCTGCTTTTGGATCGGAAGGAGCGGTATCCCAGCT  1090

Query 1036  AGGAGGATGAGGACCTGCCCCCCCGGAACGAGATAGACCCTCCCCGGAAGCGTGTGGACTCCCCGATGCTGAAC  1109
            ..|||||..||||||||||.||||||||.||..|.|||||.|||||||||||||||||.||.||.|||||||.|
Sbjct 1091  GTGAGGACCAGGACCTGCCTCCCCGGAATGATGTTGACCCCCCCCGGAAGCGTGTGGATTCTCCCATGCTGAGC  1164

Query 1110  CGGCACGGCAAGCGGCGGCCAGAACGCAAATCCATGGAGGTGCTCAGCGTGAC---------GGACGGCGGCTC  1174
            ||.|||||.||||||||.|||||.||.||.||||||||.||.||.|||.|.||         ||..||.|||||
Sbjct 1165  CGTCACGGGAAGCGGCGACCAGAGCGGAAGTCCATGGAAGTCCTGAGCATCACCGATGCCGGGGGTGGTGGCTC  1238

Query 1175  CCCGGTGCTTGCGCG--GGGCC-----CATCCCCCAATTTACGCA-AGGAAGAAA---------GTTTTT----  1227
            |||.||.|...|.||  |||||     .||..||||      ||| ||..|||.|         ||...|    
Sbjct 1239  CCCTGTACCCACCCGACGGGCCTTGGAGATGGCCCA------GCACAGCCAGAGATCCCGTAGCGTCAGTGGAG  1306

Query 1228  -------GGGT---TCCT---------TA--------AAGGGGGC-------TTCCT-----------------  1250
                   ||||   ||||         ||        ||||.|.|       |||||                 
Sbjct 1307  CCTCCACGGGTCTGTCCTCCAGCCCTCTAAGCAGCCCAAGGAGTCCGGTCTTTTCCTTTTCACCGGAGCCGGGG  1380

Query 1251  --------TGAGGCT-------------------TTTCCCA---CCAGCC----CCATCCAGGAGGCCCCCG--  1288
                    |||||||                   .||||.|   .|||.|    ||.||..|| ||||||.|  
Sbjct 1381  GCTGGAGATGAGGCTCGAGGCGGGGGCTCCCCGACTTCCAAAACGCAGACGCTGCCTTCTCGG-GGCCCCAGGG  1453

Query 1289  --GGGGGCCCC------CTTAACCCCTTCCACCAAG-GGCCATTCC---CCCCTCCCC--CCCCCC-----CCC  1343
              ||||||.||      |  |.||||..||.||.|| |.||..|||   |||||.|||  ||||||     |||
Sbjct 1454  GTGGGGGCGCCGGGGAGC--AGCCCCCGCCCCCCAGTGCCCGCTCCACACCCCTGCCCGGCCCCCCAGGCTCCC  1525

Query 1344  C------------AGGGA------------CACCTGTCCACACGCCAAAGGAGAGCCCGGCTGGCACGCCCA--  1391
            |            .||||            |.|||.|.|||||||          |||||  |.||..||||  
Sbjct 1526  CGCGCTCCTCTGGCGGGACCCCCTTGCACTCGCCTCTGCACACGC----------CCCGG--GCCAGTCCCACC  1587

Query 1392  ---ACCCC-----CAAGGCCCCCGTCCAGCCCC------AGCGTCGGAGGGGTGC--CCTGGAGGGCGCGGCTC  1449
               |||||     |||..||.||..||||||||      .||||||  ||||.||  ||||||||...||.|||
Sbjct 1588  GGGACCCCGGGGACAACACCACCCCCCAGCCCCGGCGGTGGCGTCG--GGGGAGCCGCCTGGAGGAGTCGTCTC  1659

Query 1450  AACTCCATCAAGAACAGCTTTCTGGGCTCACCCCGCTTCCACCGCCGGAAACTGCAAGTTCCGACGCCGGAGGA  1523
            |||||||||...||||||||.||||||||.||.|||||.|||||.||.||..||||.||.||.||..|.|||||
Sbjct 1660  AACTCCATCCGCAACAGCTTCCTGGGCTCCCCTCGCTTTCACCGGCGCAAGATGCAGGTCCCTACCGCTGAGGA  1733

Query 1524  GATGTCCAACCTGACACCAGAGTCGTCCCCAGAGCTGGCGAAGAAG-TCCTGGTTTGGGAACTTCATCAGCCTG  1596
            ||||||||.|.||||.||||||||.|||||.|||||||| ||.|.| ||||||||.||||||||||||..|.||
Sbjct 1734  GATGTCCAGCTTGACGCCAGAGTCCTCCCCGGAGCTGGC-AAAACGCTCCTGGTTCGGGAACTTCATCTCCTTG  1806

Query 1597  GAGAAGGAGGAGCAGATCTTCGTGGTCATCAAAGACAAACCTCTGAGCTCCATCAAGGCTGACATCGTGCACGC  1670
            ||.||.||.||.||.||.|||.|.||..|.||.|||||||||||.|||..||||||.||.||||||||.||.||
Sbjct 1807  GACAAAGAAGAACAAATATTCCTCGTGCTAAAGGACAAACCTCTCAGCAGCATCAAAGCAGACATCGTCCATGC  1880

Query 1671  CTTCCTGTCGATTCCCAGTCTCAGCCACAGCGTCATCTCCCAAACGAGCTTCCGGGCCGAGTACAAGGCCACGG  1744
            |||.||||||||.|||||.||.||.|||||.||..|.||.||.||.||||||.||||||||||||||||||..|
Sbjct 1881  CTTTCTGTCGATCCCCAGCCTGAGTCACAGTGTGCTGTCACAGACCAGCTTCAGGGCCGAGTACAAGGCCAGTG  1954

Query 1745  GGGGGCCAGCCGTGTTCCAGAAGCCGGTCAAGTTCCAGGTTGATATCACCTACACGGAGGGT------------  1806
            |.||.||..||||.|||||.|||||.|||...||||||||.||.||||.||.|.|.||||||            
Sbjct 1955  GCGGCCCCTCCGTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCTGAGGGTCCAGAGCCCTCC  2028

Query 1807  -------GGGGAGGC-GCAGAAGGAGAACGGCATCTACTCCGTCACCTTCACCCTGCTCTCAGGCCCCAGCCGT  1872
                   |||..||| ||.||.|..|  .|||||||||||||||||||||||.||..||||.||.|||||||||
Sbjct 2029  CCGCGACGGGACGGCAGCGGAGGTGG--TGGCATCTACTCCGTCACCTTCACTCTCATCTCGGGTCCCAGCCGT  2100

Query 1873  CGCTTCAAGAGGGTGGTGGAGACCATCCAGGCCCAGCTGCTGAGCACACACGACCCGCC-----TGC-GGCCCA  1940
            ||.||||||.|.||||||||||||||||||||.|||||.||||||||.||.||||.|||     ||| ||||| 
Sbjct 2101  CGGTTCAAGCGAGTGGTGGAGACCATCCAGGCACAGCTCCTGAGCACTCATGACCAGCCCTCCGTGCAGGCCC-  2173

Query 1941  GCACTTGTCAGACACCACTAACTGTATGGAAATGATGACGGGG--------CGGCTTTCCAAATGTGGAATT--  2004
                 ||.|||||               ||.|.||  ||||||        ||||.|.|      |||   |  
Sbjct 2174  -----TGGCAGAC---------------GAGAAGA--ACGGGGCCCAGACCCGGCCTGC------TGG---TGC  2216

Query 2005  ---ATCCCGAAAAGT-----------------------------------------------------------  2016
               |.||||||...|                                                           
Sbjct 2217  CCCACCCCGAAGCCTGCAGCCCCCACCCGGCCGCCCAGACCCAGAGCTGAGCAGCTCTCCCCGCCGAGGCCCCC  2290

Query 2017  --------------------------------------------  2016
                                                        
Sbjct 2291  CCAAGGACAAGAAGCTCCTGGCCACCAACGGGACCCCTCTGCCC  2334