Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14996
- Subject:
- NM_001371575.1
- Aligned Length:
- 2785
- Identities:
- 1403
- Gaps:
- 1381
Alignment
Query 1 ATGAAGAAGTTTTTCGACTCCCGGCGAGAGCAGGGCGGCTCTGGCCTGGGCTCCGGCTCCAGCGGAGGAGGGGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGAAGTTTTTCGACTCCCGGCGAGAGCAGGGCGGCTCTGGCCTGGGCTCCGGCTCCAGCGGAGGAGGGGG 74
Query 75 CAGCACCTCGGGCCTGGGCAGTGGCTACATCGGAAGAGTCTTCGGCATCGGGCGACAGCAGGTCACAGTGGACG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAGCACCTCGGGCCTGGGCAGTGGCTACATCGGAAGAGTCTTCGGCATCGGGCGACAGCAGGTCACAGTGGACG 148
Query 149 AGGTGTTGGCGGAAGGTGGATTTGCTATTGTATTTCTGGTGAGGACAAGCAATGGGATGAAATGTGCCTTGAAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGTGTTGGCGGAAGGTGGATTTGCTATTGTATTTCTGGTGAGGACAAGCAATGGGATGAAATGTGCCTTGAAA 222
Query 223 CGCATGTTTGTCAACAATGAGCATGATCTCCAGGTGTGCAAGAGAGAAATCCAGATAATGAGGGATCTTTCAGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGCATGTTTGTCAACAATGAGCATGATCTCCAGGTGTGCAAGAGAGAAATCCAGATAATGAGGGATCTTTCAGG 296
Query 297 GCACAAGAATATTGTGGGTTACATTGATTCTAGTATCAACAACGTGAGTAGCGGTGATGTATGGGAAGTGCTCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCACAAGAATATTGTGGGTTACATTGATTCTAGTATCAACAACGTGAGTAGCGGTGATGTATGGGAAGTGCTCA 370
Query 371 TTCTGATGGACTTTTGTAGAGGTGGCCAGGTGGTAAACCTGATGAACCAGCGCCTGCAAACAGGCTTTACAGAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCTGATGGACTTTTGTAGAGGTGGCCAGGTGGTAAACCTGATGAACCAGCGCCTGCAAACAGGCTTTACAGAG 444
Query 445 AATGAAGTGCTCCAGATATTTTGTGATACCTGTGAAGCTGTTGCCCGCCTGCATCAGTGCAAAACTCCTATTAT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AATGAAGTGCTCCAGATATTTTGTGATACCTGTGAAGCTGTTGCCCGCCTGCATCAGTGCAAAACTCCTATTAT 518
Query 519 CCACCGGGACCTGAAGGTTGAAAACATCCTCTTGCATGACCGAGGCCACTATGTCCTGTGTGACTTTGGAAGCG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCACCGGGACCTGAAGGTTGAAAACATCCTCTTGCATGACCGAGGCCACTATGTCCTGTGTGACTTTGGAAGCG 592
Query 593 CCACCAACAAATTCCAGAATCCACAAACTGAGGGAGTCAATGCAGTAGAAGATGAGATTAAGAAATACACAACG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCACCAACAAATTCCAGAATCCACAAACTGAGGGAGTCAATGCAGTAGAAGATGAGATTAAGAAATACACAACG 666
Query 667 CTGTCCTATCGAGCACCAGAAATGGTCAACCTGTACAGTGGCAAAATCATCACTACGAAGGCAGACATTTGGGC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGTCCTATCGAGCACCAGAAATGGTCAACCTGTACAGTGGCAAAATCATCACTACGAAGGCAGACATTTGGGC 740
Query 741 TCTTGGATGTTTGTTGTATAAATTATGCTACTTCACTTTGCCATTTGGGGAAAGTCAGGTGGCAATTTGTGATG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTTGGATGTTTGTTGTATAAATTATGCTACTTCACTTTGCCATTTGGGGAAAGTCAGGTGGCAATTTGTGATG 814
Query 815 GAAACTTCACAATTCCTGATAATTCTCGATATTCTCAAGACATGCACTGCCTAATTAGGTATATGTTGGAACCA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAACTTCACAATTCCTGATAATTCTCGATATTCTCAAGACATGCACTGCCTAATTAGGTATATGTTGGAACCA 888
Query 889 GACCCTGACAAAAGGCCGGATATTTACCAGGTGTCCTACTTCTCATTTAAGCTACTCAAGAAAGAGTGCCCAAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACCCTGACAAAAGGCCGGATATTTACCAGGTGTCCTACTTCTCATTTAAGCTACTCAAGAAAGAGTGCCCAAT 962
Query 963 TCCAAATGTACAGAACTCTCCCATTCCTGCAAAGCTTCCTGAACCAGTGAAAGCCAGTGAGGCAGCTGCAAAAA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCAAATGTACAGAACTCTCCCATTCCTGCAAAGCTTCCTGAACCAGTGAAAGCCAGTGAGGCAGCTGCAAAAA 1036
Query 1037 AGACCCAGCCAAAGGCCAGACTGACAGATCCCATTCCCACCACAGAGACTTCAATTGCACCCCGCCAGAGGCCT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGACCCAGCCAAAGGCCAGACTGACAGATCCCATTCCCACCACAGAGACTTCAATTGCACCCCGCCAGAGGCCT 1110
Query 1111 AAAGCTGGGCAGACTCAGCCGAACCCAGGAATCCTTCCCATCCAGCCAGCGCTGACACCCCGGAAGAGGGCCAC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAAGCTGGGCAGACTCAGCCGAACCCAGGAATCCTTCCCATCCAGCCAGCGCTGACACCCCGGAAGAGGGCCAC 1184
Query 1185 TGTTCAGCCCCCACCTCAGGCTGCAGGATCCAGCAATCAGCCTGGCCTTTTAGCCAGTGTTCCCCAACCAAAAC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGTTCAGCCCCCACCTCAGGCTGCAGGATCCAGCAATCAGCCTGGCCTTTTAGCCAGTGTTCCCCAACCAAAAC 1258
Query 1259 CCCAAGCCCCACCCAGCCAGCCTCTGCCGCAAACTCAGGCCAAGCAGCCACAGGCTCCTCCCACTCCACAGCAG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCCAAGCCCCACCCAGCCAGCCTCTGCCGCAAACTCAGGCCAAGCAGCCACAGGCTCCTCCCACTCCACAGCAG 1332
Query 1333 ACGCCTTCTACTCAGGCCCAGGGTCTGCCCGCTCAGGCCCAGGCCACACCCCAGCACCAGCAGCATACAATAAA 1406
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1333 ACGCCTTCTACTCAGGCCCAGGGTCTGCCCGCTCAGGCCCAGGCCACACCCCAGCACCAGCAGC---------A 1397
Query 1407 ACTTAGTATGAAACTTT--------------------------------------------------------- 1423
||| |||.
Sbjct 1398 ACT----------CTTCCTCAAGCAGCAACAGCAGCAGCAACAGCCACCGCCAGCACAGCAGCAGCCGGCAGGC 1461
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1462 ACGTTTTACCAGCAGCAGCAGGCCCAGACTCAGCAGTTTCAGGCAGTACATCCAGCAACCCAGAAACCAGCAAT 1535
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1536 TGCTCAGTTCCCTGTGGTGTCCCAAGGAGGCTCTCAACAGCAGCTAATGCAGAATTTCTACCAGCAGCAGCAGC 1609
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1610 AGCAGCAACAACAACAGCAACAGCAACAGCTGGCCACAGCCCTGCATCAACAACAGCTGATGACTCAGCAGGCT 1683
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1684 GCCTTGCAGCAAAAGCCCACTATGGCAGCAGGACAGCAGCCCCAGCCACAGCCAGCTGCAGCCCCACAGCCAGC 1757
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1758 CCCTGCCCAGGAGCCAGCGATTCAAGCCCCAGTAAGACAACAGCCAAAGGTTCAGACAACCCCACCTCCTGCCG 1831
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1832 TCCAGGGGCAGAAAGTTGGATCTCTCACTCCACCCTCATCCCCCAAAACCCAACGTGCTGGGCACAGGCGTATT 1905
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1906 CTCAGTGACGTAACCCACAGTGCAGTCTTTGGGGTCCCTGCCAGCAAATCAACCCAGCTGCTCCAGGCAGCTGC 1979
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 1980 AGCTGAGGCCAGTCTCAATAAGTCCAAGTCTGCAACCACCACTCCATCAGGCTCTCCTCGGACCTCTCAACAAA 2053
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2054 ACGTTTATAATCCTTCAGAAGGGTCTACGTGGAATCCCTTTGATGACGATAATTTCTCCAAACTCACAGCTGAA 2127
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2128 GAACTGCTAAACAAGGACTTTGCCAAGCTTGGGGAAGGCAAACATCCCGAGAAGCTTGGAGGCTCAGCTGAGAG 2201
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2202 TTTGATCCCAGGCTTTCAATCAACCCAAGGTGATGCTTTTGCTACGACCTCATTTTCTGCTGGAACTGCTGAAA 2275
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2276 AAAGGAAGGGTGGGCAGACTGTGGACTCTGGCCTCCCGCTTCTAAGCGTGTCTGATCCTTTCATTCCTCTTCAA 2349
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2350 GTACCTGATGCACCAGAAAAACTAATTGAGGGACTCAAATCTCCTGACACTTCTCTTCTGCTCCCTGACCTCTT 2423
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2424 GCCTATGACAGATCCTTTTGGTAGCACTTCTGATGCTGTAATTGAAAAAGCTGATGTTGCTGTTGAGAGTCTCA 2497
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2498 TACCAGGACTGGAGCCCCCAGTTCCCCAGCGCCTCCCATCTCAGACGGAATCTGTGACCTCGAATCGCACAGAA 2571
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2572 GATAGTAATCTCATCTCAGGTTTTGATGTCCCTGAGGGCTCGGACAAGGTGGCTGAAGATGAGTTTGACCCTAT 2645
Query 1424 -------------------------------------------------------------------------- 1423
Sbjct 2646 TCCTGTATTGATAACCAAAAACCCACAAGGTGGGCACTCTAGAAACAGCAGTGGGAGCTCTGAGTCCAGTCTTC 2719
Query 1424 ----------------------------------------------- 1423
Sbjct 2720 CCAACCTAGCCAGGTCTTTACTGCTGGTGGATCAGCTCATAGACCTG 2766
