Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15006
- Subject:
- XM_011522583.3
- Aligned Length:
- 2236
- Identities:
- 587
- Gaps:
- 1597
Alignment
Query 1 ATGGTGAAGCTCTCTATTGTCCTGACCCCACAGTTCCTGTCCCATGACCAGGGCCAGCTCTCCAAGGAGCTGCA 74
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1 ATGGTGAAGCTCTCTATTGTCCTGACCCCACGGTTCCTGTCCCATGACCAGGGCCAGCTCACCAAGGAGCTGCA 74
Query 75 GCAGCATGTAAAGTCAGTGACATGCCCATGCGAGTACCTGAGGA------------------------------ 118
||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 75 GCAGCACGTAAAGTCAGTGACATGCCCATGCGAGTACCTGAGGAAGGTGACCTTGAGGAACCCTGGGAGCTCAG 148
Query 119 ---------------------------------------------------------AGGTTATCAATACTCTG 135
|||||||||||||||||
Sbjct 149 GAAGGAAGGAGCGCCCAGAAGCAGGGACAGGGAGCTGGTTGGGGAGGACCAGAAGTCAGGTTATCAATACTCTG 222
Query 136 GCTGACCATCATCATCGTGGGACTGACTTTGGTGGAAGTCCTTGGTTACATGTCATTATTGCGTTTCCGACAAG 209
||||||||||.||||||||||||||||||||||||||||||||||||||.|.||||||.||.|||||.||.|||
Sbjct 223 GCTGACCATCGTCATCGTGGGACTGACTTTGGTGGAAGTCCTTGGTTACTTATCATTACTGTGTTTCTGAGAAG 296
Query 210 TTATAAAGTTGTCATTACCCTCTGGATAGTTTACCTTTGGGTGTCTCTCCTGAAGACTATCTTCTGGTCTCGAA 283
|||||||.|||.|||..|||||||.|.|..|||||||||.||||||.|||||||||||||||||..|||||.||
Sbjct 297 TTATAAATTTGCCATCTCCCTCTGCACAAGTTACCTTTGTGTGTCTTTCCTGAAGACTATCTTCCCGTCTCAAA 370
Query 284 ATGGACATGATGGATCCACGGATGTACAGCAGAGAGCCTGGAGGTCCAACCGCCGTAGACAGGAAGGGCTGAGG 357
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 371 ATGGACATGATGGATCCACGGATGTACAGCAGAGAGCCAGGAGGTCCAACCGCCGTAGACAGGA---------- 434
Query 358 TCCATTTGTATGCACACAAAGAAAAGAGTTTCTTCCTTTCGAGGAAATAAAATTGTCCTGAAAGACGTCATTAC 431
|||||.|||||||||||||.|||||.||.||||
Sbjct 435 -----------------------------------------AGGAATTAAAATTGTCCTGGAAGACATCTTTAC 467
Query 432 TCTACGGAGACATGTGGAAACAAAAGTTAGAGCTAAAATCCGTAAGAGGAAGGTGACAACGAAAATCAACCATC 505
|.||.|||||||.||||||||.||||||.|||||||||||.||||||.||||||||||||.|||.||||||.||
Sbjct 468 TTTATGGAGACAGGTGGAAACCAAAGTTCGAGCTAAAATCTGTAAGATGAAGGTGACAACAAAAGTCAACCGTC 541
Query 506 ATGACAAAATCAATGGAAAGAGGAAGACCGCC------------------------------------------ 537
||||||||||||||||||||||||||||||||
Sbjct 542 ATGACAAAATCAATGGAAAGAGGAAGACCGCCAAAGAACATCTGAGGAAACTAAGCATGAAAGAACGTGAGCAC 615
Query 538 --AGAAAA--------------CAGA------------------------------------------------ 547
|||||| ||||
Sbjct 616 GGAGAAAAGGAGAGGCAGGTGTCAGAGGCAGAGGAAAACGGGAAATTGGATATGAAAGAAATACACACCTACAT 689
Query 548 --AAATGTTTCAACGTGCGCAAGAGTTGCGGCGGCGAGCAGAGGACTACCACAAATGCAAAATCCCCCCTTCTG 619
|||||||||||||||||||||.||||||||||||.||||||||||||.|||.||||||||||.|||||||||
Sbjct 690 GGAAATGTTTCAACGTGCGCAAGCGTTGCGGCGGCGGGCAGAGGACTACTACAGATGCAAAATCACCCCTTCTG 763
Query 620 CAAGAAAGGCTCTTTGCAACTGGGTCAGAATGGCGGCAGCGGAGCATCGTCATTCTT-CAGGATTGCCCTACTG 692
||||||||.||||||||||| |||.||| ||| || ||| ||
Sbjct 764 CAAGAAAGCCTCTTTGCAAC-------------------CGGTGCA--------CTTACA--ATT-------TG 801
Query 693 GCCCTACCTCACAGCTGAAACTTTAAAAA----ACAGGATGGGCCACCA-GCCACCTCCTCCAACTCAACAACA 761
|...|||||...|| ||||| |.||| |||| ||| |||
Sbjct 802 GTATTACCTGGGAG-TGAAA----AGAAATATTACAG---------CCATGCC--------------------- 840
Query 762 TTCTATAACTGATAACTCCCTGAGCCTCAAGACACCTCCCTTAGTGTCTGCTCACTCCCCTTCCACCCTCAGCG 835
Sbjct 841 -------------------------------------------------------------------------- 840
Query 836 GATGATAATCTCAAGACACCTCCCGAGTGTGTGCTCACTCCCCTTCCACCCTCAGCGGATGATAATCTCAAGAC 909
Sbjct 841 -------------------------------------------------------------------------- 840
Query 910 ACCTCCCGAGTGTGTGCTCACTCCCCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTCCTGAGTGTCTGC 983
Sbjct 841 -------------------------------------------------------------------------- 840
Query 984 TCACTCCCCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTCCCGAGTGTCTACTCACTCCCCTTCCACCC 1057
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1058 TCAGCTCTACCCTCAGCTCCACCCTCAGCGGATGATAATCTCAAGACACGTGCCGAGTGTCTGCTCCATCCCCT 1131
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1132 TCCACCCTCAGCAGATGATAATCTCAAGACACTTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCAC 1205
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1206 CCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAAT 1279
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1280 CTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAA 1353
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1354 GACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTC 1427
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1428 AGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGG 1501
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1502 GGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTC 1575
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1576 AGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCCG 1649
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1650 ATGAGAGCCTCAAGACACCTCCCTTAGCTACTCAGGAGGCTGAGGCAGAAAAACCACGCAAACCCAAGAGGCAG 1723
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1724 AGGGCGGCTGAGATGGAACCACCTCCCGAACCCAAGAGGCGGAGGTTGAGCGACGTGGAACCGTCACGCAAACC 1797
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1798 CAAGAGGCGGAGGGCCGCTGACGTGGAACCATCATCACCCGAACCCAAGAGGCGGAGGGTCGGTGATGTGGAAC 1871
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1872 CGTCACGCAAACCCAAGAGGCGGAGGGCCGCTGACGTGGAACCATCATCACCCGAACCCAAGAGGCGGAGGGTC 1945
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1946 GGTGACGTGGAACCGTCACGCAAACCCAAGAGGCGGAGGGCCGCTGACGTGGAACCATCACCTCCCGAACCCAA 2019
Sbjct 841 -------------------------------------------------------------------------- 840
Query 2020 GAGGCGGAGGTTGAGC 2035
Sbjct 841 ---------------- 840
