Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15079
- Subject:
- XM_011242712.1
- Aligned Length:
- 1281
- Identities:
- 753
- Gaps:
- 471
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACCATTCTAATAGGGAAAAGGATGATAGACAACGGACAACTAAAACCATGGCACAAAGGAATACACACTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCGAGACCATCTGGCACTTCAACATCCTCTGGGGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGGGTGTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATCTCTACACCAATGAATATGTAGCCATTAAACTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAACCAATAAAATCACGTGCTCCACAACTTCATTTAGAGTACAGGTTTTATAAACAGCTTGGCAGTGCAGGTGA 296
Query 1 -------------------------------------------------ATGGTGCTGGAGCTCCTTGGCCCTA 25
|||||||||||.|||||||||||||
Sbjct 297 AGGCCTCCCACAGGTTTATTACTTTGGACCATGTGGGAAGTACAATGCCATGGTGCTGGAACTCCTTGGCCCTA 370
Query 26 GCTTGGAGGACTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACGGTGTTAATGATAGCCATCCAGCTG 99
|||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||.||
Sbjct 371 GCTTGGAAGACTTGTTTGACCTCTGTGACCGAACGTTTACTTTGAAGACGGTGTTAATGATAGCCATCCAGTTG 444
Query 100 CTTTCTCGAATGGAATACGTGCACTCAAAGAACCTCATTTACCGAGATGTCAAGCCAGAGAACTTCCTGATTGG 173
||||||||||||||.||.||.|||||||||||.||.|||||||||||||||||.||||||||||||.|||||||
Sbjct 445 CTTTCTCGAATGGAGTATGTACACTCAAAGAATCTTATTTACCGAGATGTCAAACCAGAGAACTTCTTGATTGG 518
Query 174 TCGACAAGGCAATAAGAAAGAGCATGTTATACACATTATAGACTTTGGACTGGCCAAGGAATACATTGACCCCG 247
.||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||..||||.||.|
Sbjct 519 CCGACAAGGCAATAAGAAAGAGCATGTAATACACATTATAGATTTTGGACTGGCCAAGGAATATGTTGATCCTG 592
Query 248 AAACCAAAAAACACATACCTTATAGGGAACACAAAAGTTTAACTGGAACTGCAAGATATATGTCTATCAACACG 321
||||||||||||||||||||||.||.||.|||||||||||.|||||||||||.|||||.||||||||||||||.
Sbjct 593 AAACCAAAAAACACATACCTTACAGAGAGCACAAAAGTTTGACTGGAACTGCGAGATACATGTCTATCAACACA 666
Query 322 CATCTTGGCAAAGAGCAAAGCCGGAGAGATGATTTGGAAGCCCTAGGCCATATGTTCATGTATTTCCTTCGAGG 395
|||||.||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||.|||||.|||||
Sbjct 667 CATCTAGGCAAAGAGCAAAGCCGGCGAGATGATTTGGAAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAGG 740
Query 396 CAGCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAAAGAGAGATATCAAAAAATTGGTGACACCAAAAGGA 469
||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.||||||||||
Sbjct 741 CAGCCTACCCTGGCAAGGACTCAAGGCTGATACATTAAAAGAGAGATATCAAAAAATCGGTGATACCAAAAGGA 814
Query 470 ATACTCCCATTGAAGCTCTCTGTGAGAACTTTCCAGAGGAGATGGCAACCTACCTTCGATATGTCAGGCGACTG 543
||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.
Sbjct 815 ATACTCCCATCGAAGCTCTCTGTGAGAACTTTCCAGAGGAGATGGCAACCTACCTTCGATATGTCAGGCGATTA 888
Query 544 GACTTCTTTGAAAAACCTGATTATGAGTATTTACGGACCCTCTTCACAGACCTCTTTGAAAAGAAAGGCTACAC 617
||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||..|||||||||.||
Sbjct 889 GACTTCTTTGAAAAACCTGATTATGAGTATTTACGGACCCTCTTCACAGATCTGTTTGAACGGAAAGGCTATAC 962
Query 618 CTTTGACTATGCCTATGATTGGGTTGGGAGACCTATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTG 691
|||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||.|||||||||||||
Sbjct 963 CTTTGACTATGCCTATGATTGGGTTGGAAGGCCTATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCTGGTG 1036
Query 692 CATCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGGTG 765
|||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||.||||||||
Sbjct 1037 CATCTGCAATAACTCGAGAAAGCCACACACACAGGGATCGGCCATCACAACAACAGCCTCTTAGAAATCAG--- 1107
Query 766 GTTAGCTCAACCAA-----TGGAGAGCTGAATG--TTGATGATCCCACGGG------AGCCCACT--CCAATGC 824
|||| |..|.|||.||.|| ||| ||.| ||| ..|||||| ||| ||
Sbjct 1108 ----------CCAAGATCTTTAACAGCAGAGTGGTTTG-TGCT-----GGGCCCCTTTTCCCACTCGCCA--GC 1163
Query 825 ACCAATCACAGCTCATGCCGAGGTGGAGGTAGTGGAGGAAGCTAAGTGCTGCTGTTTCTTTAAGAGGAAAAGGA 898
||| ||||
Sbjct 1164 ACC---CACA---------------------------------------------------------------- 1170
Query 899 AGAAGACTGCTCAGCGCCACAAG 921
Sbjct 1171 ----------------------- 1170
