Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15083
- Subject:
- XM_017025802.2
- Aligned Length:
- 3271
- Identities:
- 920
- Gaps:
- 2251
Alignment
Query 1 ATGCCGGGCGGCGGCGGG-----CTTGGCGGCGCTGCGCGAGCAGGAGCGGGTATACGAGTGGTTCGGGCTGGT 69
|||||||||||||||||| ||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCGGGCGGCGGCGGGGGGCCCTCGGCGGCGCTGCGCGAGCAGGAGCGGGTATACGAGTGGTTCGGGCTGGT 74
Query 70 GCTGGGCTCGGCGCAGCGCCTGGAGTTCATGTGCGGGCTGCTGGACCTGTGCAACCCGCTGGAGCTGCGCTTCC 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCTGGGCTCGGCGCAGCGCCTGGAGTTCATGTGCGGGCTGCTGGACCTGTGCAACCCGCTGGAGCTGCGCTTCC 148
Query 144 TTGGCTCGTGCCTGGAGGACCTGGCGCGCAAGGACTACCACTACCTGCGCGACTCGGAGGCCAAGGCCAACGGC 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTGGCTCGTGCCTGGAGGACCTGGCGCGCAAGGACTACCACTACCTGCGCGACTCGGAGGCCAAGGCCAACGGC 222
Query 218 CTCTCGGACCCGGGGCCGCTGGCCGACTTCCGAGAGCCCGCGGTGCGCTCGCGCCTCATCGTCTACCTGGCGCT 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCTCGGACCCGGGGCCGCTGGCCGACTTCCGAGAGCCCGCGGTGCGCTCGCGCCTCATCGTCTACCTGGCGCT 296
Query 292 GCTGGGCTCGGAGAACCGGGAGGCCGCTGGCCGTCTGCACCGCCTGCTACCCCAGGTGGACTCGGTGCTCAAAA 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCTGGGCTCGGAGAACCGGGAGGCCGCTGGCCGTCTGCACCGCCTGCTACCCCAGGTGGACTCGGTGCTCAAAA 370
Query 366 GCCTGCGCGCGGCCCGGGGCGAGGGCTCGCGGGGCGGCGCGGAGGACGAGCGCGGCGAGGACGGCGACGGCGAG 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCTGCGCGCGGCCCGGGGCGAGGGCTCGCGGGGCGGCGCGGAGGACGAGCGCGGCGAGGACGGCGACGGCGAG 444
Query 440 CAGGACGCCGAGAAGGACGGCTCAGGCCCGGAAGGCGGCATTGTGGAGCCGCCGGG-CGGCGGCGGGCTTGGCT 512
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 445 CAGGACGCCGAGAAGGACGGCTCAGGCCCGGAAGGCGGCATTGTGGAGCC-CCGGGTCGGCGGCGGGCTTGGCT 517
Query 513 CCAGGGCCCAGGAGGAACTGCTGCTGCTCTTCACCATGGCCTCGCTGCACCCGGCTTTCTCCTTCCACCAGCGG 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 CCAGGGCCCAGGAGGAACTGCTGCTGCTCTTCACCATGGCCTCGCTGCACCCGGCTTTCTCCTTCCACCAGCGG 591
Query 587 GTCACCCTGAGGGAACACTTGGAGAGGCTCCGCGCCGCGCTCCGCGGGGGCCCCGAGGACGCGGAGGTGGAGGT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 GTCACCCTGAGGGAACACTTGGAGAGGCTCCGCGCCGCGCTCCGCGGGGGCCCCGAGGACGCGGAGGTGGAGGT 665
Query 661 AGAGCCGTGCAAGTTTGCCGGCCCCAGGGCCCAGGTAAGGCGCACGGAGCCTCCCTGGACTCGCGGTG------ 728
||||||||||||||||||||||||||||||||| ||.|..|.||| |||..||||
Sbjct 666 AGAGCCGTGCAAGTTTGCCGGCCCCAGGGCCCA-------------GAACAACTCTG--CTCATGGTGATTACA 724
Query 729 ----------CGATCGCTGC---------CCCGGCGGCCTCCCCGGCCTCGCTCTCGGACGCCCCTTGCCCGAG 783
|||..||.|| |..| ||||....|||| .||||| ..|||.||...|
Sbjct 725 TGCAAAATAACGAGAGCAGCTTAATAGAGCAAG-----CTCCAATACCTC-----AGGACG-GACTTACCGTGG 787
Query 784 CCCC------AGCCCGGC--GCAGGTGGCTCGGAATCCCCACCCGGCAGCT--------------CCCAGCGCC 835
|.|| |||.|.|| |.||.|| |.|.||....|.||.| .||||.|..
Sbjct 788 CACCTCACAGAGCTCAGCGAGAAGCTG--------TACACATTGAGAAGATAATGTTGAAAGGAGTCCAGAGAA 853
Query 836 AGAGGGCTGA----------------GCTTCGTC--------TCGCTGGGCCGCTCCGTTCCACTCCCCCAC-- 883
|.||.||||| .||| || | |||.|.|.|| ||.||.| |||
Sbjct 854 AAAGAGCTGACAAATACTGGGAGTACACTT--TCAAAGTAAAT---TGGTCTGATC--TTTCAGT----CACAA 916
Query 884 ------------CCCACC-----CCACACCCCGG--------CAGA------CACAGCCACCCGCCATCACAGA 926
|||||| |.||| || |.|| ||.|| .|.|.|.|.|||.|||
Sbjct 917 CAGTAACAAAAACCCACCAAGAACTACA----GGAATTTCTACTGAAGCTTCCAAAG-GAACTGTCTTCAGAGA 985
Query 927 ATGCTCT--AGAAGTCC--CTTCCGTGC-------CACGGT--GTTGCCACGGAAG--ACGTGGAGCTCCCCGC 985
||.| |.|||.|| |||..|.|| ||.||| .|||..|.||.|| |||..||..|||...|
Sbjct 986 ---CTTTTGACAAGACCATCTTAAGAGCCCTGAATCAGGGTTCCTTGAAAAGGGAGGAACGGCGACATCCTGAC 1056
Query 986 CCGGGGCCCCTCTCGGAGGAA---------AAGT----------------------GTCGGGACGT-------T 1021
|..|.||||.|| |..|||.| |||| |||.|.|.|| |
Sbjct 1057 CTAGAGCCCATC-CTAAGGCAGCTATTTTCAAGTTCATCACAAGCTTTTCTACAAAGTCAGAAAGTACACAGCT 1129
Query 1022 TTTGGCTCTGAG--CATCTCAGC--GCTC------------------GGTGCGGGA-GCC-----------GCG 1061
| ||.|.|| |||.|||.| .||| |.|||.|.| ||| |..
Sbjct 1130 T----CTTTCAGTCCATATCATCAGACTCCCTACACAGTATCAATGTGTTGCAGCATGCCATAATCCACAAGAA 1199
Query 1062 GGGCGCTGGAGGAA----CC---TGTG----------------------------------------------- 1081
|....||| |||| || ||||
Sbjct 1200 GCATACTG--GGAAAAGTCCCATTGTGAACAATATTGGTACAAGTTGTTCTCCATTGGATGGGCTTACCATGCA 1271
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1272 ATATTCTGAACAGAATGGAATTGTGGATTGGAGGAAGCAAAGCTGTACCACCATTCAACACCCAGAGCACTGTG 1345
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1346 TGACCTCGGCTGACCAGCATTCTGCTGAAAAACGGAGTTTATCTTCAATAAATAAGAAGAAAGGAAAGCCACAA 1419
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1420 ACAGAAAAGGAGAAAATTAAGAAAACTGACAACAGATTGAATAGTAGAATAAATGGTATTAGACTCTCCACTCC 1493
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1494 TCAGCATGCCCATGGTGGTACTGTGAAAGATGTGAATTTGGACATTGGCTCTGGACATGACACATGTGGAGAAA 1567
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1568 CATCTTCAGAGAGTTACAGTTCTCCATCTAGTCCCCGACATGATGGAAGAGAAAGTTTTGAAAGTGAAGAAGAG 1641
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1642 AAAGACAGAGACACAGACAGCAATTCTGAGGATTCTGGGAATCCATCAACAACTAGGTTTACAGGTTACGGTTC 1715
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1716 TGTCAACCAGACTGTCACTGTCAAGCCACCTGTTCAAATTGCTTCACTAGGAAATGAGAATGGAAACCTTTTAG 1789
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1790 AAGATCCCTTAAACTCACCCAAGTATCAGCATATTTCTTTTATGCCAACGTTACACTGTGTCATGCACAATGGT 1863
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1864 GCCCAGAAGTCTGAAGTTGTCGTTCCTGCACCCAAACCCGCTGATGGCAAAACCATAGGGATGCTTGTTCCTAG 1937
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 1938 TCCTGTTGCTATTTCTGCAATAAGGGAGTCTGCAAATTCAACCCCTGTTGGAATACTAGGGCCAACAGCTTGCA 2011
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2012 CTGGAGAATCGGAAAAGCACCTTGAGTTACTGGCTTCCCCTTTACCTATTCCATCAACCTTCCTTCCACACAGT 2085
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2086 AGTACTCCCGCTTTGCATCTTACAGTTCAGAGGCTAAAGTTGCCACCACCACAGGGATCTTCTGAGAGCTGCAC 2159
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2160 AGTTAACATCCCACAACAACCACCCGGAAGCCTGAGCATCGCATCACCAAACACTGCCTTTATTCCTATCCATA 2233
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2234 ACCCAGGTAGTTTCCCAGGCTCTCCTGTTGCTACCACGGACCCCATCACAAAATCTGCATCCCAAGTGGTAGGA 2307
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2308 CTCAATCAAATGGTGCCTCAAATTGAGGGAAACACAGGGACAGTCCCTCAGCCTACCAATGTGAAGGTAGTTCT 2381
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2382 TCCAGCAGCTGGCCTCTCAGCTGCTCAGCCACCAGCTTCCTACCCCTTACCAGGCTCTCCCCTTGCTGCCGGCG 2455
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2456 TGTTACCCAGCCAGAACTCCAGTGTGCTCAGCACAGCAGCAACTTCTCCCCAGCCAGCGAGCGCAGGTATCAGC 2529
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2530 CAGGCCCAGGCAACTGTTCCTCCTGCAGTTCCTACCCACACCCCAGGCCCTGCCCCGAGCCCAAGCCCTGCCTT 2603
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2604 GACACACAGTACCGCGCAGAGTGACAGCACCTCTTACATCAGTGCTGTGGGGAACACGAACGCTAATGGGACAG 2677
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2678 TAGTGCCACCGCAGCAGATGGGCTCAGGTCCTTGTGGTTCTTGTGGGCGAAGGTGCAGCTGTGGGACCAATGGA 2751
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2752 AACCTTCAGCTAAATAGTTACTATTATCCTAATCCAATGCCTGGACCAATGTACCGAGTCCCTTCATTCTTTAC 2825
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2826 TCTGCCATCCATTTGCAATGGCAGCTACCTCAACCAAGCACATCAGAGCAATGGAAACCAACTTCCTTTTTTTC 2899
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2900 TGCCTCAGACTCCATATGCAAATGGACTGGTACATGACCCAGTCATGGGGAGCCAAGCCAACTATGGCATGCAG 2973
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 2974 CAGATGGCAGGATTTGGGAGATTCTATCCTGTATATCCAGCACCTAACGTAGTTGCCAACACCAGTGGTTCGGG 3047
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 3048 GCCCAAGAAGAATGGGAATGTCTCATGTTACAATTGTGGTGTAAGCGGACACTATGCACAGGACTGTAAGCAGT 3121
Query 1082 -------------------------------------------------------------------------- 1081
Sbjct 3122 CGTCCATGGAGGCCAATCAACAAGGCACTTACAGACTGAGATACGCACCTCCCCTCCCCCCTTCTAATGATACG 3195
Query 1082 --------------- 1081
Sbjct 3196 TTGGATTCTGCAGAC 3210
