Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15089
- Subject:
- XM_006538467.3
- Aligned Length:
- 1764
- Identities:
- 1337
- Gaps:
- 177
Alignment
Query 1 ATGTCGTGGCTCTTCGGCATTAACAAGGGCCCCAAGGGTGAAGACGCGGGGCCGCCGCCGCCTTTGCCGCCCGC 74
|||||||||||||||||||| |||||||||||||||.||||.|.|.|||||.||||.|||.|||||||||||
Sbjct 1 ATGTCGTGGCTCTTCGGCAT---CAAGGGCCCCAAGGGCGAAGGCACAGGGCCTCCGCTGCCCTTGCCGCCCGC 71
Query 75 GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGCTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT 148
.||.||||||||.|||||||||||.||||||||...||||||||||||..||||||||||||||||||||||||
Sbjct 72 TCAACCCGGGGCGGAGGGCGGCGGTGACCGCGGGGCGGGAGACCGGCCATCGCCCAAGGACAAATGGAGCAACT 145
Query 149 TCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATGCCAAGGACGCC 222
|||||||.||.||||||||.||.||.|||||.|||||.||||||.|||||||||||||..||||||||||.||.
Sbjct 146 TCGACCCGACGGGCCTGGAACGTGCGGCCAAAGCGGCTCGCGAGTTGGAGCACTCGCGCCATGCCAAGGAGGCA 219
Query 223 CTGAATCTGGCACAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCGC 296
||||.|||.|||||||||||||||||||||||||||.||||.||.||||||||||||||.|||||.||.||.||
Sbjct 220 CTGAGTCTCGCACAGATGCAGGAGCAGACGCTGCAGCTGGAACAGCAGTCCAAGCTCAAGGAGTACGAAGCTGC 293
Query 297 CGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCC 370
|||.||||||||.||||||||.||||||||.|.|||.||.|||||.||.|||||.|||||||..||.|||||.|
Sbjct 294 CGTAGAGCAGCTGAAGAGCGAACAGATCCGTGTGCAAGCCGAGGAAAGAAGGAAAACCCTGACTGAAGAGACAC 367
Query 371 GGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAG 444
|.|||||||||||.|||||||||||.||.||.|||||.||.||.||||||||.||||||||.|||||.||.|||
Sbjct 368 GACAGCACCAGGCTAGGGCCCAGTACCAGGATAAGCTCGCTCGACAGCGCTATGAGGACCAGCTGAAACAACAG 441
Query 445 CAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCAC 518
||||||||.|||||.|||||||||.||||.||.||||||||.||||||||||||||.|||||.|||||||||||
Sbjct 442 CAACTTCTGAATGAAGAGAATTTAAGGAAACAAGAGGAGTCTGTGCAGAAGCAGGAGGCCATACGGCGAGCCAC 515
Query 519 CGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGGGCGCGCGCCA 592
.||||||||.||||||||||||.||||.||.||.||||||.||||.|||||.||.||.|||||.||.||.||||
Sbjct 516 TGTGGAGCGCGAGATGGAGCTGAGGCATAAAAACGAGATGTTGCGGGTGGAAGCTGAAGCCCGAGCACGGGCCA 589
Query 593 AGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCGTCAGACCGTC 666
||||.||.||.|||||||||||.||||||||.||.|||||.||.||.|||||.||.||||||||.||||||.||
Sbjct 590 AGGCTGATCGAGAGAATGCAGATATCATCCGGGAACAGATTCGACTCAAGGCTGCTGAGCACCGCCAGACCATC 663
Query 667 TTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACTGGGACAAAGT 740
||||||||.||||||||.||||||||||||.||||.||||||||||||||.|||||||||||||||||||||||
Sbjct 664 TTGGAGTCTATCAGGACAGCTGGCACCTTGCTTGGTGAAGGATTCCGTGCATTTGTGACAGACTGGGACAAAGT 737
Query 741 GACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCACGCTTGTCGCCG 814
||||||.||||||||||||.||||.||..|.||||||||.|||||.||.||.||||||||.||...|||.||.|
Sbjct 738 GACAGCTACGGTGGCTGGGTTGACACTATTAGCTGTTGGAGTCTATTCTGCAAAGAATGCTACTTCTGTTGCTG 811
Query 815 GCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGGCG 888
|.||.|..||.|||||.||..||||.|||||||||.|.|||||.|||||.|||||.|||.|.|||||.|||||.
Sbjct 812 GTCGGTATATTGAGGCCCGATTGGGAAAGCCGTCCTTGGTGAGAGAGACCTCCCGAATCTCAGTGCTAGAGGCA 885
Query 889 CTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGTGTTGTGCTCAG 962
.||.||||.|||||||||||||||.||||.||..||||..||||||||||.||..|||||||.||..|.|||||
Sbjct 886 TTGAGGCATCCCATCCAGGTCAGCAGGCGACTGGTCAGCAGACCCCAGGATGCATTGGAGGGCGTCATCCTCAG 959
Query 963 TCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCCTGTACA 1036
|||.||||||||.||||||||.||.||.||.|||||.||||||||.||.||||||||||||...||||||||.|
Sbjct 960 TCCTAGCCTGGAGGCACGGGTCCGAGATATTGCCATCGCAACAAGAAATACCAAGAAGAACAAAAGCCTGTATA 1033
Query 1037 GGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGC 1110
|||||.|.||||||||.|||||.||.||.||.||.|||||.||.||||||||||||||.||.|||||.||||||
Sbjct 1034 GGAACGTTCTGATGTATGGGCCCCCGGGGACTGGCAAGACACTATTTGCCAAGAAACTTGCACTGCATTCAGGC 1107
Query 1111 ATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCT 1184
||||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||.||||||||||||.|
Sbjct 1108 ATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCAATGGGGCGGGAGGGTGTGACTGCCATGCACAAGGT 1181
Query 1185 CTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCGGAAGC 1258
|||.||||||||.|..||||||||.||.||||||||||||||||||||||||||.|||||||||||..||||.|
Sbjct 1182 CTTCGACTGGGCAAGCACCAGCCGACGAGGCCTCCTGCTCTTTGTGGATGAAGCAGACGCCTTCCTCAGGAAAC 1255
Query 1259 GAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGCACAGC 1332
||||.||.||.||||||||.||.|||||||||||.||.|||||.||||||||..||.|.||.||.||||||||.
Sbjct 1256 GAGCGACTGAAAAGATAAGTGAAGACCTCAGGGCTACTCTGAATGCCTTCCTACACAGGACAGGACAGCACAGT 1329
Query 1333 AACAAGTTCATGCTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAATGACCGCATCAATGA 1406
|..|||||||||||||||||||||||.|||||.||.||||||||.||.|||||.||||||||||||||..|.||
Sbjct 1330 AGTAAGTTCATGCTGGTCCTGGCCAGTAACCAGCCTGAGCAGTTTGATTGGGCTATCAATGACCGCATTGACGA 1403
Query 1407 GATGGTCCACTTCGACCTGCCAGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGTATTTTGACAAGTATGTTC 1480
|||||||..|||.|.|||||||..||.||||||.||.|||||||||||||||||||||||||||||||||||.|
Sbjct 1404 GATGGTCTGCTTTGCCCTGCCACAGCGGGAGGAGCGAGAGCGCCTGGTGAGAATGTATTTTGACAAGTATGTCC 1477
Query 1481 TTAAGCCGGCCACAGAAGGAAAGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTC 1554
|||||||||||||||||||||||||| |..||.|||||
Sbjct 1478 TTAAGCCGGCCACAGAAGGAAAGCAG------------------------TCAGGAAGGAA------------- 1514
Query 1555 GCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCGTATGC 1628
|||||| |||.|| |||||| |.||.|.|
Sbjct 1515 ----GGCTGA-------------------GGATAT------------------CTGGCA-------GAGTTTAC 1540
Query 1629 CTCCGAGGACGGGGTCCTGACCGAGGCCATGATGGACA------CCCGCGTGCAAGATGCTGTCCAGCAGCACC 1696
||| .||| .||...||| ||.||| |||.||..|.| |||.|| |.||||.|
Sbjct 1541 CTC----------ATCC-AACTTCGGC-----TGTACAAAAAAGCCCACGCACTA-ATGGTG----GAAGCATC 1593
Query 1697 AGCAGAAGATGTGCTGGCTGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC 1758
Sbjct 1594 -------------------------------------------------------------- 1593