Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15119
Subject:
XR_001750450.1
Aligned Length:
2801
Identities:
1569
Gaps:
1232

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCTTCACTAAGCGCAGTCAGGTGGCTGTCCCCGCACGGTTCCCAGCTAATTCCCCGCTACCGGGTTGCGGCCG  74

Query    1  --------------------------------------------ATGGCCAGAAAGGCTCTCAAGCTTGCTTCG  30
                                                        ||||||||||||||||||||||||||||||
Sbjct   75  GAAGCCGGGCGCCGCGGCTCTGCTTCCCTCGGGGATCTGGCGACATGGCCAGAAAGGCTCTCAAGCTTGCTTCG  148

Query   31  TGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGTAACAAGTACTTGGACCCTAATGACTTTGG  104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGTAACAAGTACTTGGACCCTAATGACTTTGG  222

Query  105  CGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAGTTACGACTACCTCACTTCCCTGAAGAGTG  178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAGTTACGACTACCTCACTTCCCTGAAGAGTG  296

Query  179  TCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGCACCTTCGCTCTGCCAGGCGTCTCTGTGAG  252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGCACCTTCGCTCTGCCAGGCGTCTCTGTGAG  370

Query  253  CTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCACCTGGGGGCTCTGGACTACCTGTTGCCAGA  326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCACCTGGGGGCTCTGGACTACCTGTTGCCAGA  444

Query  327  GGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACAGAGCAGCATGCAAGAGATCCGCCAGGTCA  400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACAGAGCAGCATGCAAGAGATCCGCCAGGTCA  518

Query  401  TCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCTTCGATGACACCCCTCTGGGGACGGCCTCC  474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCTTCGATGACACCCCTCTGGGGACGGCCTCC  592

Query  475  CTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTGGCCGTGAAGGTCCAGCACCCAAAGGTGCG  548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTGGCCGTGAAGGTCCAGCACCCAAAGGTGCG  666

Query  549  GGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCTGGCTGTGAAGCAGCTGTTCCCAGAGTTTG  622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCTGGCTGTGAAGCAGCTGTTCCCAGAGTTTG  740

Query  623  AGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGGAGCTGGATTTCCTCAATGAAGGGAGGAAT  696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGGAGCTGGATTTCCTCAATGAAGGGAGGAAT  814

Query  697  GCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAGGTCCCCCGAATCCACTGGGACCTGTCCAC  770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAGGTCCCCCGAATCCACTGGGACCTGTCCAC  888

Query  771  GGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAATGACAGAGACTACATGGAGAGGAACAAGA  844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAATGACAGAGACTACATGGAGAGGAACAAGA  962

Query  845  TCGACGTCAAT---------------------------------------------------------------  855
            |||||||||||                                                               
Sbjct  963  TCGACGTCAATGAGGTGAGGTCAAGAGCTCAGGGCTGCTGTGCCGGGGAACGTGGGCTTGGTCAAGGCTGCCCA  1036

Query  856  --------------------------------------------------------------------------  855
                                                                                      
Sbjct 1037  GGAAGTGCCTGTGTGTCCAGGTGAGGCCTCAGAGTCTGGCCCCCTTGTCTTTAATAGGGCCCATTGTCTGGAGA  1110

Query  856  --------------------------------------------------------------------------  855
                                                                                      
Sbjct 1111  ATTATAAACTTTGAGCAAGAAAGATTCTTTCAGGTCATTTAGGCCAGCCCTGTGCACACAGCGGCCTGCAGGGA  1184

Query  856  --------------------------------------------------------------------------  855
                                                                                      
Sbjct 1185  CATGCTGAACCCCTTCTGCCATTACCTGCTTTTCCTTTGTACCATCTGAGCCCCACAAAGCTAAGCGGCCACAG  1258

Query  856  --------------------------------------------------------------------------  855
                                                                                      
Sbjct 1259  AGAACAATGATGCAAAATCAGTGGGACTTAATCCTTTTGGCTCTGTGGGGCCTGTCTGTTGTCTCTTCCCTCTT  1332

Query  856  --------------------------------------------------------------------------  855
                                                                                      
Sbjct 1333  CCTGCCCTTCTCTCTCCTTCCCACTTCCCAGATCTCAAGGGATCAGGCAAAAAGGGGACAGCAGCAACCAACTG  1406

Query  856  --------------------------------------------------------------------------  855
                                                                                      
Sbjct 1407  CATCAGCCTCCTAGAGCAGGAAAAAAGAGGAGCAGCGAAAAGGTCTCACATTTGCTTTCAGCAAATGATTTCTC  1480

Query  856  -------------------------------------------GAGATCTCACGCCACCTGGGCAAGATGTATA  886
                                                       |||||||||||||||||||||||||||||||
Sbjct 1481  GAGCAGCTACCATGTGCAAGCACTGAGTGCACTTGCTACAATAGAGATCTCACGCCACCTGGGCAAGATGTATA  1554

Query  887  GTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTGCGGAAGCACCCC  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTGCGGAAGCACCCC  1628

Query  961  GGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGAATTCCGCCTGAA  1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGAATTCCGCCTGAA  1702

Query 1035  TTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCCAGCGACTGGGAG  1108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCCAGCGACTGGGAG  1776

Query 1109  CCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAACAGAGGCATCAGC  1182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAACAGAGGCATCAGC  1850

Query 1183  CAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCCCCAGATCAGCCA  1256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCCCCAGATCAGCCA  1924

Query 1257  TCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTGGCATTGAGGCCG  1330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTGGCATTGAGGCCG  1998

Query 1331  CCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCGCTAGCTGAGCAC  1404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCGCTAGCTGAGCAC  2072

Query 1405  AAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAACTTATGGCAGAT  1478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAACTTATGGCAGAT  2146

Query 1479  CAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCCTAATATGCTGGC  1552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCCTAATATGCTGGC  2220

Query 1553  TGTTCCCTGCTCCACTC---------------------------------------------------------  1569
            |||||||||||||||||                                                         
Sbjct 2221  TGTTCCCTGCTCCACTCTGAGTGGAATTGCTCTCCCTGCCCCATTCTGGTGTCTTTCCACTCCTCAGCCCCTCA  2294

Query 1570  --------------------------------------------------------------------------  1569
                                                                                      
Sbjct 2295  TCTTGCCTCCACCCAGCTGCTCCATTTTTGCCACATCGTGGCCCGCAGCCCCAGAGTCACTGTCCATGTCACCA  2368

Query 1570  --------------------------------------------------------------------------  1569
                                                                                      
Sbjct 2369  TCCTTCTCCTCCTTTGGAATCCTCTCCGCACACTGTGGCCCTTGTCTCAGGGCCCACAAGCTGAACTGTGGCAT  2442

Query 1570  --------------------------------------------------------------------------  1569
                                                                                      
Sbjct 2443  AGCTCTCTCTTCTTCTCCAAGAAGACTCAGCAGCCTACATTCCCATTCCTGGTATGTGCCATTGGGTTGGATGT  2516

Query 1570  --------------------------------------------------------------------------  1569
                                                                                      
Sbjct 2517  CCCCACTACTTCCGTTAACCCTTCCCATTGTCAAGATGTGCCACGGGTGCCACTGGGGGCACACTGAACTTGTA  2590

Query 1570  --------------------------------------------------------------------------  1569
                                                                                      
Sbjct 2591  GGGAGTGTGATTTTGTTGGAGGTGCACATGGTCTCTGAATTTGACAGAGAACACCTTCCCTTTCCTTGCCATGT  2664

Query 1570  --------------------------------------------------------------------------  1569
                                                                                      
Sbjct 2665  CACCCTCCAGAGGAAGTCACACCTCAGCGAGGTGGTTTGGCATCTGGGGCCAACTCCATTACAGCTATGAGCTC  2738

Query 1570  ---------------------------------------------------------------  1569
                                                                           
Sbjct 2739  ACTGCTGTCAGTGACGTTTGGTGTTTTCTGTACTGTGTTTCAATAAAAACTCCTTCAAGGTTG  2801

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