Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15120
Subject:
XM_006499509.1
Aligned Length:
2159
Identities:
1935
Gaps:
4

Alignment

Query    1  ATGTTTGGGAAGAAAAAGAAAAAGATTGAAATATCTGGCCCGTCCAACTTTGAACACAGGGTTCATACTGGGTT  74
            ||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||.||
Sbjct    1  ATGTTTGGGAAGAAAAAGAAAAAGATCGAAATATCTGGCCCATCCAACTTTGAACACAGGGTTCATACTGGATT  74

Query   75  TGATGCACAAGAGCAGAAGTTTACCGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGATACGGCCAACAGGC  148
            ||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||||
Sbjct   75  TGATCCACAAGAGCAGAAGTTTACTGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGACACAGCCAACAGGC  148

Query  149  CAAAGCCTATGGTGGACCCTTCATGCATCACACCCATCCAGCTGGCTCCTATGAAGACAATCGTTAGAGGAAAC  222
            |.|||||.|||||||||||.|||||||||||||||||.|||||||||||.||||||||||||||.||||||||.
Sbjct  149  CCAAGCCCATGGTGGACCCATCATGCATCACACCCATACAGCTGGCTCCCATGAAGACAATCGTCAGAGGAAAT  222

Query  223  AAACCCTGCAAGGAAACCTCCATCAACGGCCTGCTAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAACTC  296
            |||.||||||||||||||||.|||||.||.||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  223  AAATCCTGCAAGGAAACCTCTATCAATGGTCTGCTAGAGGATTTTGACAACATCTCCGTGACTCGCTCCAACTC  296

Query  297  CCTAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATG  370
            .||||||||||||||||||||||||||||||||||||||..|.||||.|..||.|||||||.|||||||.||.|
Sbjct  297  TCTAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAGCAGCTAGCCGCATTCAAGGCCACTCGGAAGAGAACG  370

Query  371  GCTTCATCACCTTCTCCCAGTATTCCAGCGAATCCGATACTACTGCTGACTACACGACCGAAAAGTACAGGGAG  444
            ||||||||||.|||||.||.||||||||.|||||||||||.|||||.||||||||.||.|||||||||||.||.
Sbjct  371  GCTTCATCACTTTCTCACAATATTCCAGTGAATCCGATACGACTGCGGACTACACAACTGAAAAGTACAGAGAC  444

Query  445  AAGAGTCTCTATGGAGATGATCTGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAAT  518
            |.||||||||||||||||||.|||||||.|||.||||.|.|||||||.||||||||||||||||||||.|..||
Sbjct  445  AGGAGTCTCTATGGAGATGACCTGGATCTGTACTATAAAAGCAGCCATGCAGCCAAGCAAAATGGGCATGCCAT  518

Query  519  GAAAATGAAGCACGGGGAGGCCTACTATTCTGAGGTGAAGCCTTTGAAATCCGATTTTGCCAGATTTTCTGCCG  592
            |||.|||||.||.||.||.||.|||||..|||||.|||||.||||||||.||||..|.|||.||||..|||.||
Sbjct  519  GAAGATGAAACATGGAGACGCTTACTACCCTGAGATGAAGTCTTTGAAAACCGACCTGGCCGGATTCCCTGTCG  592

Query  593  ATTATCACTCACATTTGGACTCACTGAGCAAACCAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGAGAGCC  666
            |.||||||.|.||.||||||||.|||||.|||.||||||||||..|||||||.|.||||||.||||||||||||
Sbjct  593  ACTATCACACCCACTTGGACTCTCTGAGAAAATCAAGTGAATATGGTGACCTTAGGTGGGATTATCAGAGAGCC  666

Query  667  TCGAGTAGCTCCCCTCTGGATTATTCATTCCAATTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGCTCCAA  740
            ||.|||||||||||||||||.||.||||||||..||||.||||||||||||||||||||||||.||||||||||
Sbjct  667  TCTAGTAGCTCCCCTCTGGACTACTCATTCCAGCTCACGCCTTCTAGAACTGCAGGGACCAGCAGGTGCTCCAA  740

Query  741  GGAGAGCCTGGCGTACAGTGAAAGTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGT  814
            ||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.||.|
Sbjct  741  GGAGAGTCTGGCATACAGTGAAAGTGATTGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAATCATCAT  814

Query  815  ACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATG  888
            |||||.|||||||.|||||||||||..|||||||.|||||.||||.|||.|||||.||.||.||||||||.|||
Sbjct  815  ACCTGCATCAGACGAGCCCTCAGCCAGCCATGCGCCAGAGATCCAAGTCCGGCTCAGGGCTTCAGGAACCCATG  888

Query  889  ATGCCATTTGGAGCAAGTGCATTTAAAACCCATCCCCAAGGACACTCCTACAACTCCTACACCTACCCTCGCTT  962
            |||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct  889  ATGCCATTTGGAGCAAGTGCATTTAAAACTCATCCTCAAGGACACTCGTACAACTCCTACACCTACCCTCGATT  962

Query  963  GTCCGAGCCCACAATGTGCATTCCAAAGGTGGATTACGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAG  1036
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.|||||||||||||
Sbjct  963  GTCCGAGCCCACAATGTGCATTCCAAAGGTGGATTACGATCGAGCACAGATGGTCTTCAGTCCTCCACTGTCAG  1036

Query 1037  GGTCTGACACCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGT  1110
            ||||.|||||.||||||||.|||||..||||||||||||||||||||||||||.|.|||||.||.|||.||||.
Sbjct 1037  GGTCCGACACTTACCCCAGAGGCCCCACCAAACTACCTCAAAGTCAAAGCAAAGCAGGCTACTCTTCAGGCAGC  1110

Query 1111  CACCAGTACCCGTCTGGGTACCACAAAGCCACCT-TGTACCATCACCCCTCCCTGCAGAGCAGTTCGCAGTACA  1183
            |||||||||||.|||||||||||||||| ||.|| |.|||||.||.||.||||||||.|.||||||.|||||||
Sbjct 1111  CACCAGTACCCTTCTGGGTACCACAAAG-CATCTCTATACCACCATCCATCCCTGCAAACCAGTTCTCAGTACA  1183

Query 1184  TCTCCACGGCTTCCTACCTGAGCTACCTCAGCCTCTCATCCAGCACCTACCCGCCGCCCAGCTGGGGCTCCTCC  1257
            |||||||.|||||.|||.|.||||..|||||..||||.||.|||||||||||.||.||.|||||||||||||||
Sbjct 1184  TCTCCACCGCTTCTTACTTAAGCTCTCTCAGTATCTCCTCGAGCACCTACCCTCCACCTAGCTGGGGCTCCTCC  1257

Query 1258  TCCGACCAGCAGCCCTCCAGGGTGTCCCATGAACAGTTTCGGGCGGCCCTGCAGCTGGTGGTCAGCCCAGGAGA  1331
            ||.||||||||||||||.|||||.|||||||||||.||.||.||.||||||||.||||||||||||||||||||
Sbjct 1258  TCAGACCAGCAGCCCTCAAGGGTATCCCATGAACAATTCCGAGCTGCCCTGCAACTGGTGGTCAGCCCAGGAGA  1331

Query 1332  CCCCAGGGAATACTTGGCCAACTTTATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCACCGAGA  1405
            ||||||||||||.||||..||||||||.||||||||.|||||.||.||.||||||||.|||||.||.||.||||
Sbjct 1332  CCCCAGGGAATATTTGGATAACTTTATTAAAATCGGAGAAGGGTCGACAGGCATCGTGTGCATTGCAACAGAGA  1405

Query 1406  AACACACAGGGAAACAAGTTGCAGTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGAGAACTGCTTTTCAAT  1479
            ||||||||||.||.|||||.|||||||||||||||||||||||.|||||.||||||||.|||||.|||||.|||
Sbjct 1406  AACACACAGGCAAGCAAGTGGCAGTGAAGAAAATGGACCTCCGAAAGCAGCAGAGACGGGAACTCCTTTTTAAT  1479

Query 1480  GAGGTCGTGATCATGCGGGATTACCACCATGACAATGTGGTTGACATGTACAGCAGCTACCTTGTCGGCGATGA  1553
            |||||||||||.|||||.|||||||||||||||||.||.|||||||||||||.||||||||||||.||.|||||
Sbjct 1480  GAGGTCGTGATAATGCGTGATTACCACCATGACAACGTAGTTGACATGTACAACAGCTACCTTGTTGGAGATGA  1553

Query 1554  GCTCTGGGTGGTCATGGAGTTTCTAGAAGGTGGTGCCTTGACAGACATTGTGACTCACACCAGAATGAATGAAG  1627
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct 1554  GCTCTGGGTGGTCATGGAGTTTCTAGAAGGTGGTGCCTTGACAGACATTGTCACTCATACCAGAATGAATGAAG  1627

Query 1628  AACAGATAGCTACTGTCTGCCTGTCAGTTCTGAGAGCTCTCTCCTACCTTCATAACCAAGGAGTGATTCACAGG  1701
            |.|||||||||||||||||||||||||||||||.||||||.|||||||||||||||||||||||||||||||||
Sbjct 1628  AGCAGATAGCTACTGTCTGCCTGTCAGTTCTGAAAGCTCTGTCCTACCTTCATAACCAAGGAGTGATTCACAGG  1701

Query 1702  GACATAAAAAGTGACTCCATCCTCCTGACAAGCGATGGCCGGATAAAGTTGTCTGATTTTGGTTTCTGTGCTCA  1775
            ||||||||.|||||||||||.||.||||||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 1702  GACATAAAGAGTGACTCCATTCTTCTGACAAGCGATGGCCGGATAAAGTTATCTGACTTTGGTTTCTGTGCTCA  1775

Query 1776  AGTTTCCAAAGAGGTGCCGAAGAGGAAATCATTGGTTGGCACTCCCTACTGGATGGCCCCTGAGGTGATTTCTA  1849
            ||||||||||||||||||.||||||||.|||.||||.||.||.||.|||||||||||.||||||||||||||.|
Sbjct 1776  AGTTTCCAAAGAGGTGCCAAAGAGGAAGTCACTGGTGGGTACCCCATACTGGATGGCACCTGAGGTGATTTCCA  1849

Query 1850  GGCTACCTTATGGGACAGAGGTGGACATCTGGTCCCTCGGGATCATGGTGATAGAAATGATTGATGGCGAGCCC  1923
            |||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||||||
Sbjct 1850  GGCTACCTTATGGGACAGAGGTGGACATCTGGTCCCTCGGGATAATGGTGATAGAGATGATTGATGGGGAGCCC  1923

Query 1924  CCCTACTTCAATGAGCCTCCCCTCCAGGCGATGCGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCT  1997
            |||||.||||||||||||||.||.|||||.|||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1924  CCCTATTTCAATGAGCCTCCTCTGCAGGCCATGAGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCT  1997

Query 1998  ACACAAGGTTTCTTCAGTGCTCCGGGGATTCCTAGA-CTTGATGTTGGTGAGGGAGCCCTCTCAGAGAGCAACA  2070
            |||||||||||||||..|||||||.||||||||||| ||| |||||||||||||||||||||||.|||||.|||
Sbjct 1998  ACACAAGGTTTCTTCCATGCTCCGAGGATTCCTAGATCTT-ATGTTGGTGAGGGAGCCCTCTCAAAGAGCCACA  2070

Query 2071  GCCCAGGAACTCCTCGGACATCCATTCTTAAAACTAGCAGGTCCACCGTCTTGCATTGTCCCCCTCATGAGACA  2144
            ||.||.||||||||.||||||||||||||||||.|.|||||||||||.|||||||||||.||.|||||||||||
Sbjct 2071  GCTCAAGAACTCCTTGGACATCCATTCTTAAAATTGGCAGGTCCACCATCTTGCATTGTTCCTCTCATGAGACA  2144

Query 2145  ATACAGGCATCAC  2157
            ||||||.||||||
Sbjct 2145  ATACAGACATCAC  2157

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