Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15129
• Subject: NM_175235.3
• Aligned Length: 1469
• Identities: 896
• Gaps: 454

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCCGCGGCGCCTGGAGGGTCTGCGCCGCCCGCCGGCCCCAGCCCGCGCTTGGCTTTCAGCACCGCGGACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCGGCGGCATGAGCGGGCTGAACCCAGGTCCCGCGGTGCCCATGAAGGACCACGACGCCATCAAGCTCTTCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGGGCAGATCCCGCGGGGCTTGGACGAGCAGGACCTCAAGCCGCTGTTCGAGGAGTTCGGCCGCATCTACGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGACGGTGCTGAAGGACCGGCTCACCGGCCTCCACAAAGGCTGTGCCTTCCTCACCTACTGCGCCCGGGACTC  296

Query    1  -------------------------------------------------ATG-ATC-TCAGATCCCCCCTCAAA  23
                                                             ||| ||| ||.|||||       ||
Sbjct  297  TGCCCTCAAGGCCCAGAGTGCACTGCATGAGCAGAAGACCCTGCCAGGGATGAATCGTCCGATCC-------AA  363

Query   24  CAACAGCTGGAACTCTGTTCTCTATCTTC--------------TAGAGGACCGAAAGCTGTTTGTGGGGATGCT  83
            ....|||.||               ||.|              .|||||||||.||||||||||||||||||.|
Sbjct  364  GTGAAGCCGG---------------CTGCCAGTGAGGGCCGAGGAGAGGACCGGAAGCTGTTTGTGGGGATGTT  422

Query   84  GGGCAAGCAGCAGGGTGAGGAGGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACATCGAGGAGTGCACGGTCC  157
            ||||||||||||||||||||||||.||||||||.||||||||||||||.|||||.||||||||||||||.||||
Sbjct  423  GGGCAAGCAGCAGGGTGAGGAGGATGTCAGACGTCTGTTCCAGCCCTTCGGCCATATCGAGGAGTGCACTGTCC  496

Query  158  TGCGGAGTCCTGACGGCACCAGTAAAGGCTGTGCCTTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCGGCC  231
            ||||||||||.|||||.||||||||||||||||||||||||||.|||||.||||||||||||||.||.||.|||
Sbjct  497  TGCGGAGTCCGGACGGTACCAGTAAAGGCTGTGCCTTTGTGAAATTCGGAAGTCAAGGGGAAGCCCAAGCTGCC  570

Query  232  ATCCGGGGTCTGCACGGCAGCCGGACCATGGCGGGCGCCTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGA  305
            ||||.|||.||.|||||.||||||||.|||.||||.|||||.||||||||.|||||.||||||||.||||||||
Sbjct  571  ATCCAGGGACTACACGGTAGCCGGACAATGACGGGTGCCTCCTCCAGCCTGGTGGTTAAGCTGGCAGACACCGA  644

Query  306  CCGGGAGCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCCGC  379
            ||||||||||||||||||..||||||||||.|||||.|||||.|||||.|||||||||||.||.||.|||||.|
Sbjct  645  CCGGGAGCGCGCGCTGCGAAGGATGCAGCAAATGGCTGGCCAGCTGGGTGCCTTCCACCCGGCACCGCTGCCCC  718

Query  380  TAGGGGCCTGCGGCGCCTACACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGCGGCGGCACAGGGCCCA  453
            |.||||||||.||||||||.|||||.||||||||.|||||||||||.||..|||||||.||.||.|||||.||.
Sbjct  719  TCGGGGCCTGTGGCGCCTATACCACTGCGATCCTACAGCACCAGGCAGCGTTGCTGGCCGCAGCGCAGGGTCCG  792

Query  454  GGCCTAGGCCCGGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTTTAGCCTGGTAGCTGCGCCTCT  527
            ||..||||||.||||||.||.|||||.|||||||||||.||||||||||||||.|||.||||.|||||.||.||
Sbjct  793  GGGTTAGGCCAGGTGGCCGCGGTGGCCGCCCAGATGCAGCACGTGGCGGCCTTCAGCTTGGTGGCTGCACCGCT  866

Query  528  GTTGCCCGCGGCAGCAGCCAA---CTCCCCGCCTGGCAGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCCA  598
            ||||||||||   ||||||||   .|||||...|||||..||||||||..|.|||||.||.|||||.|||||||
Sbjct  867  GTTGCCCGCG---GCAGCCAATACATCCCCTGGTGGCAATGGCCCTGGTGCACTCCCTGGCCTTCCAGCGCCCA  937

Query  599  TCGGGGTCAATGGATTCGGC-CCTCTGACCCCCCAGACCAATGGCCAGCCGGGCTCCGACACGCTCTACAATAA  671
            |.||.||||||||||||||| ||| ||||||||||||.|||.||.|||||.|||||||||||||||||.||.||
Sbjct  938  TGGGAGTCAATGGATTCGGCTCCT-TGACCCCCCAGAGCAACGGACAGCCAGGCTCCGACACGCTCTATAACAA  1010

Query  672  CGGGCTCTCCCCTTATCCAGCCCAGAGCCCCGGCGTGGCTGACCCCCTGCAGCAGGCCTACGCTGGGATGCACC  745
            ||||.|.||||||                                                             
Sbjct 1011  CGGGGTTTCCCCT-------------------------------------------------------------  1023

Query  746  ACTACGCAGCAGCCTATCCGTCGGCCTATGCCCCAGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCCC  819
              |||.|||||||||||||.||||||||||||||||.|||||||||||||.||||.|||||||||||.|||||.
Sbjct 1024  --TACCCAGCAGCCTATCCCTCGGCCTATGCCCCAGCGAGCACAGCTTTTTCCCAACAGCCTTCAGCTCTGCCT  1095

Query  820  CAGCAGCAGAGAGAAGGCCCCGAAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGTGATGCGGA  893
            ||.||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 1096  CAACAACAAAGAGAAGGCCCCGAAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGGGATGCAGA  1169

Query  894  ACTCATACAGACATTCCTGCCCTTTGGAGCCGTTGTCTCTGCTAAAGTCTTTGTGGATCGAGCCACCAACCAGA  967
            ||||||||||||||||||||||||.|||||.|||||||||||.|||||.||||||||.||.||||||||.||||
Sbjct 1170  ACTCATACAGACATTCCTGCCCTTCGGAGCTGTTGTCTCTGCCAAAGTTTTTGTGGACCGTGCCACCAATCAGA  1243

Query  968  GCAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACTGCTATTCAGGCGATGAATGGCTTT  1041
            |||||||||||||||||||||||||||||||||||||.|||||||||||.||.||.|||||.||||||||||||
Sbjct 1244  GCAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACCAGTGCCCAGACCGCCATCCAGGCCATGAATGGCTTT  1317

Query 1042  CAAATTGGCATGAAGAGGCTCAAGGTCCAGCTAAAGCGGCCCAAGGATGCCAACCGGCCTTAC  1104
            |||||.||||||||||||||||||||||||||||||.|.||.||||||||||||.||||||||
Sbjct 1318  CAAATCGGCATGAAGAGGCTCAAGGTCCAGCTAAAGAGACCTAAGGATGCCAACAGGCCTTAC  1380