Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15295
- Subject:
- NM_001039547.3
- Aligned Length:
- 1603
- Identities:
- 872
- Gaps:
- 716
Alignment
Query 1 ATGTCGGGGCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCCCGGCTTCGTGCTGGGGCTGGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCGGGGCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCCCGGCTTCGTGCTGGGGCTGGA 74
Query 75 TGTGGGCAGTTCTGTGATCCGCTGCCACGTCTATGACCGGGCGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGTGGGCAGTTCTGTGATCCGCTGCCACGTCTATGACCGGGCGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGG 148
Query 149 TAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAAATTGATCCTGATGTTCTTTGGATTCAATTTGTTGCCGTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAAATTGATCCTGATGTTCTTTGGATTCAATTTGTTGCCGTA 222
Query 223 ATAAAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAGC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATAAAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAGC 296
Query 297 AACTTTTATTACGTGGAACAAGAAAACAGGAAATCATTTTCACAACTTTATAAGTTGGCAAGACTTAAGAGCTG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTTTTATTACGTGGAACAAGAAAACAGGAAATCATTTTCACAACTTTATAAGTTGGCAAGACTTAAGAGCTG 370
Query 371 TTGAACTTGTAAAATCTTGGAATAATTCTCTTCTTATGAAGATATTTCACAGTTCTTGCCGAGTGCTTCACTTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTGAACTTGTAAAATCTTGGAATAATTCTCTTCTTATGAAGATATTTCACAGTTCTTGCCGAGTGCTTCACTTT 444
Query 445 TTCACTAGAAGTAAACGACTTTTTACAGCCAGTTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAGATTGGT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCACTAGAAGTAAACGACTTTTTACAGCCAGTTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAGATTGGT 518
Query 519 CTGGATTTTACAGAACTTGACTGAGGTGCAAAAGGCAGTTGAAGAAGAAAATTGCTGCTTTGGGACTATTGATA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGGATTTTACAGAACTTGACTGAGGTGCAAAAGGCAGTTGAAGAAGAAAATTGCTGCTTTGGGACTATTGATA 592
Query 593 CCTGGTTGTTATATAAGCTCACAAAAGGTTCTGTATATGCCACAGATTTTTCAAATGCTAGTACAACTGGACTT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTGGTTGTTATATAAGCTCACAAAAGGTTCTGTATATGCCACAGATTTTTCAAATGCTAGTACAACTGGACTT 666
Query 667 TTTGACCCATATAAGATGTGTTGGAGTGGGATGATTACCTCTCTAATTTCGATACCACTTTCTCTCCTACCTCC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTTGACCCATATAAGATGTGTTGGAGTGGGATGATTACCTCTCTAATTTCGATACCACTTTCTCTCCTACCTCC 740
Query 741 TGTGAGGGACACAAGCCACAATTTTGGATCAGTGGATGAAGAGATATTTGGTGTGCCTATACCAATAGTTGCCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTGAGGGACACAAGCCACAATTTTGGATCAGTGGATGAAGAGATATTTGGTGTGCCTATACCAATAGTTGCCT 814
Query 815 TGTTAAAGGTCCCTGGATATGACCAGAATATCTGCTATATTTTTGGGA-----------------AGGGG---- 867
||.| || .|||||||.| |||.||.||.||| ||| |||.|
Sbjct 815 TGGT---------TG---CTGACCAGCA-ATCAGCCATGTTT---GGAGAGTGCTGCTTCCAGACAGGTGATGT 872
Query 868 -------ACCAT------TGAGCCAGTATT--CTATCA----TGGAAGTA--CTTTA----------------- 903
||||| ||.|.||.|.|| .|||.| |||||.|| |||.|
Sbjct 873 GAAATTAACCATGGGAACTGGGACATTTTTGGATATTAACACTGGAAATAGCCTTCAACAGACTACTGGAGGCT 946
Query 904 -------------------------------------------------------------------------- 903
Sbjct 947 TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGT 1020
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1021 ACTGCCATAAAATGGGCTCAGCAGTTAGACCTTTTCACAGATGCTGCTGAGACTGAAAAAATGGCCAAAAGTTT 1094
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1095 GGAGGATTCTGAAGGAGTTTGTTTTGTTCCATCTTTTAGTGGATTACAGGCTCCATTAAATGACCCCTGGGCAT 1168
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1169 GTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCT 1242
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1243 TTCAGAAACAAACAGTTATATGAGATGATGAAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGG 1316
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1317 AGGAGTTTGTAAGAATGGTTTTGTCATGCAGATGACTTCAGACCTGATTAATGAGAATATAGACAGACCTGCCG 1390
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1391 ACATTGACATGTCATGCCTGGGTGCAGCTTCTCTAGCTGGCCTTGCTGTTGGGTTTTGGACTGACAAGGAGGAA 1464
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1465 CTAAAGAAACTGAGACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAATGTCAAGAATATGAAATGAGTCTGGA 1538
Query 904 ------------------------------------------------- 903
Sbjct 1539 AAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGACA 1587