Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15515
- Subject:
- XM_006514584.3
- Aligned Length:
- 3119
- Identities:
- 1124
- Gaps:
- 1855
Alignment
Query 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA 74
||||||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||||||||
Sbjct 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTAAGGCCATTGACAGCCTCCCAGACTGTTAAGACATTTTCACA 74
Query 75 AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC 148
|||||.||||||||||..||||||.||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct 75 AAACAAACCAGCAGCAATTAGGACGTTTCAACAGATTCGGTGCTATTCTGCACCTGTAGCTGCTGAACCATTTC 148
Query 149 TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG 222
|.|||||||||||||||||||||||||||||.|||||||||||.|||.||||.||.||||||||||||||||||
Sbjct 149 TTAGTGGGACTAGTTCGAACTATGTGGAGGAAATGTACTGTGCCTGGTTGGAGAATCCCAAAAGTGTACATAAG 222
Query 223 TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT 296
|||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.||||||.||||
Sbjct 223 TCATGGGACATTTTTTTCCGAAACACCAATGCTGGAGCCCCACCGGGCACTGCCTACCAGAGCCCCCTTTCCCT 296
Query 297 GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG 370
|||.|||.|||||||||||.|..||||||||||||||||||||||.||||||||.||.|||||.|||||.||||
Sbjct 297 GAGTCGAAGCTCCCTGGCTACCATGGCCCATGCACAGTCCCTGGTGGAAGCACAACCTAACGTCGACAAACTCG 370
Query 371 TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC 444
|||||||||||.||||.||||||||.||||||||||||||||||.|..|.||.|||||..|.|||.|.||.||.
Sbjct 371 TGGAGGACCACTTGGCGGTGCAGTCTCTCATCAGGGCATATCAGGTCAGGGGTCACCACATTGCAAAACTTGAT 444
Query 445 CCCCTGGGGAT------------TTTGGATGCTGATCTGG--AC----TCCTC---CGTGCCCGCTGACATTAT 497
||.||.||.|| |||.||||.||.||.|| || ||.|| |||| .||
Sbjct 445 CCTCTCGGAATTAGTTGTGTAAATTTTGATGATGCTCCGGTAACTGTTTCTTCAAACGTG-----------GAT 507
Query 498 CT--CA---TCCACAGACAAACTT------------------GGGTTCTATGGCCTGGATGAGTCTGACCTCGA 548
|| || |.||..||...|||| ||||||||||||||..|.|||||||||||.||
Sbjct 508 CTTGCAGTTTTCAAGGAACGACTTCGAATGCTAACAGTAGGAGGGTTCTATGGCCTACACGAGTCTGACCTTGA 581
Query 549 CAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCC 622
|||||||||||||||.|||||||||||||||||||||||||||||..|||||||||||||.|||||||||||||
Sbjct 582 CAAGGTCTTCCACTTACCCACCACCACTTTCATCGGGGGACAGGAGCCAGCACTTCCTCTTCGGGAGATCATCC 655
Query 623 GTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGGTGGAGTTCATGTTCATCAATGACCTGGAGCAGTGCCAG 696
||||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||..||||.||.||||||
Sbjct 656 GTCGGCTGGAGATGGCCTACTGCCAGCACATTGGTGTGGAGTTCATGTTCATTAATGATTTGGAACAATGCCAG 729
Query 697 TGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATGCAGTTCACAAATGAGGAGAAACGGACCCTGCTGGCCAG 770
||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||.||||||.||||||||||
Sbjct 730 TGGATCCGACAGAAGTTTGAGACCCCTGGAATCATGCAGTTCACCAATGAGGAGAAGCGGACCTTGCTGGCCAG 803
Query 771 GCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACAGCGGAAGTGGTCCTCTGAGAAGCGCTTTGGTCTAGAAG 844
||||||.||.|||||||||||||||||||||||||||||.|||||||||||.||||||||.||||||||.||||
Sbjct 804 GCTTGTACGATCCACCAGGTTTGAGGAGTTCCTACAGCGAAAGTGGTCCTCGGAGAAGCGTTTTGGTCTGGAAG 877
Query 845 GCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAGTCTAGTGAGAATGGCGTGGACTACGTGATC 918
||||.|||||.||||||||||||||||||||.||||||||.|.|||.||||..|||||.||||||||.||||||
Sbjct 878 GCTGTGAGGTGCTGATCCCTGCCCTCAAGACAATCATTGATATGTCAAGTGCAAATGGAGTGGACTATGTGATC 951
Query 919 ATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTG 992
|||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.|||||
Sbjct 952 ATGGGGATGCCACACAGAGGACGGCTGAACGTGCTTGCAAATGTCATCAGGAAGGAGCTGGAGCAAATATTCTG 1025
Query 993 TCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAGATGTGAAGTACCACCTGGGCATGTATCACC 1066
|||.||.||.||||||||||||||||||||||||||.||.||.||..|||||||||||||||||||||||||||
Sbjct 1026 TCAGTTTGACTCAAAGCTGGAGGCAGCTGATGAGGGTTCTGGGGACATGAAGTACCACCTGGGCATGTATCACC 1099
Query 1067 GCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCT 1140
||||||||||.|||||.||||||||.|||||.||.||||||||||||||.|||||||||||.||.|||||.|||
Sbjct 1100 GCAGGATCAACCGTGTGACCGACAGAAACATCACTTTGTCCTTGGTGGCTAACCCTTCCCATCTAGAGGCTGCT 1173
Query 1141 GACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTGTGGCGACACTGAAGGGAAAAAGGTAAGGCC 1214
|||||.||.||||||||.|||||||||||.||||||||.||||||||.||||||||||||||||||||.|.|.|
Sbjct 1174 GACCCTGTCGTGATGGGAAAGACCAAAGCTGAACAGTTCTACTGTGGAGACACTGAAGGGAAAAAGGTGATGTC 1247
Query 1215 ----------CAGAGAGAGGC-----GTGCAAGGCAG---ATCGTCA----AGGCC--CCATGTTCCAGCATGG 1264
||..|.||.|| .|||..|.||| ||||| | ||.|| ||||.| |||| |
Sbjct 1248 TATCCTGCTGCATGGGGATGCTGCTTTTGCTGGCCAGGGCATCGT-ATATGAGACCTTCCATCT--CAGC---G 1315
Query 1265 AGTT-CCG--CT-CAC---------------------------CAACA-------------------------- 1281
|.|| ||| || ||| |||||
Sbjct 1316 ACTTGCCGTCCTACACAACCCATGGCACTGTTCATGTGGTTGTCAACAACCAGATTGGCTTCACCACAGACCCT 1389
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1390 CGGATGGCCCGCTCCTCTCCCTACCCCACTGATGTGGCCCGAGTGGTGAATGCCCCCATTTTCCATGTCAACTC 1463
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1464 AGATGACCCTGAAGCTGTCATGTATGTATGCAAGGTGGCAGCTGAGTGGAGAAACACCTTCCACAAGGATGTTG 1537
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1538 TAGTTGATCTGGTGTGTTATCGACGAAATGGCCACAATGAGATGGACGAACCTATGTTTACACAGCCACTCATG 1611
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1612 TACAAGCAGATCCGCAAGCAGAAGCCTGTACTGCAGAAGTATGCAGAATTGCTAGTCTCCCAGGGTGTCGTCAA 1685
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1686 TCAGCCTGAGTACGAGGAGGAAATCTCCAAGTATGATAAGATCTGTGAGGAAGCATTTACCAGATCCAAAGATG 1759
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1760 AGAAGATCTTGCACATCAAGCACTGGCTGGATTCCCCCTGGCCTGGCTTTTTCACCCTGGATGGACAGCCCAGG 1833
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1834 AGCATGACCTGCCCCTCCACTGGCCTGGAGGAGGATGTCTTGTTCCACATTGGAAAGGTGGCCAGCTCTGTACC 1907
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1908 TGTGGAGAACTTTACTATCCATGGAGGGCTGAGCCGGATCTTGAAGACCCGCAGAGAGCTTGTGACGAACCGGA 1981
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1982 CTGTGGACTGGGCCCTGGCAGAGTACATGGCATTTGGCTCACTGCTGAAGGAAGGCATCCATGTGCGGCTGAGT 2055
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2056 GGCCAGGATGTGGAGCGGGGCACCTTCAGCCATCGCCACCATGTGCTCCATGATCAGAATGTTGACAAAAGAAC 2129
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2130 CTGCATCCCCATGAACCACCTTTGGCCAAATCAGGCCCCTTACACTGTATGCAACAGCTCGCTGTCTGAGTACG 2203
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2204 GTGTCCTGGGCTTTGAGCTGGGCTTTGCCATGGCTAGCCCTAATGCTCTGGTTCTCTGGGAGGCCCAGTTTGGT 2277
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2278 GACTTCAACAACATGGCACAGTGCATCATTGACCAGTTCATCTGCCCAGGACAGGCAAAGTGGGTGCGGCAGAA 2351
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2352 TGGCATTGTGCTCCTGCTGCCTCATGGCATGGAAGGCATGGGTCCCGAGCATTCCTCTGCCCGCCCAGAGCGGT 2425
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2426 TTCTGCAGATGTGCAATGATGACCCAGATGTCCTGCCTGACCTGCAGGAAGAAAACTTTGACATCAATCAGCTC 2499
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2500 TATGACTGCAACTGGATTGTTGTCAACTGTTCCACCCCTGGCAACTTCTTCCATGTGCTGCGACGACAGATCTT 2573
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2574 GCTGCCCTTCCGGAAGCCGTTAATCGTCTTCACTCCCAAATCCCTCCTGCGCCACCCTGAGGCAAGAACTAGCT 2647
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2648 TTGACGAGATGCTGCCAGGAACGCACTTCCAGCGTGTGATCCCAGAAAATGGACCTGCAGCTCAGGACCCACAC 2721
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2722 AAAGTCAAGAGACTTCTCTTCTGCACTGGGAAGGTGTACTATGACCTCACCCGAGAGCGCAAAGCCAGGAACAT 2795
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2796 GGAGGAGGAGGTGGCTATTACAAGGATTGAGCAGCTATCACCATTCCCCTTTGACCTCCTGCTGAAAGAGGCAC 2869
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2870 AGAAGTATCCCAATGCTGAGCTGGCCTGGTGCCAGGAAGAGCACAAGAACCAAGGCTACTATGACTATGTCAAG 2943
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2944 CCAAGACTTCGTACCACCATTGACCGTGCTAAGCCTGTCTGGTATGCTGGCCGAGACCCGGCAGCTGCTCCAGC 3017
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 3018 CACTGGCAACAAGAAAACACACCTGACAGAGCTGCAGCGCTTTCTGGACACAGCCTTTGACCTGGACGCATTCA 3091
Query 1282 ----------- 1281
Sbjct 3092 AGAAATTCTCT 3102
