Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15515
- Subject:
- XM_006514586.3
- Aligned Length:
- 3083
- Identities:
- 1117
- Gaps:
- 1828
Alignment
Query 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA 74
||||||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||||||||
Sbjct 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTAAGGCCATTGACAGCCTCCCAGACTGTTAAGACATTTTCACA 74
Query 75 AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC 148
|||||.||||||||||..||||||.||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct 75 AAACAAACCAGCAGCAATTAGGACGTTTCAACAGATTCGGTGCTATTCTGCACCTGTAGCTGCTGAACCATTTC 148
Query 149 TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG 222
|.|||||||||||||||||||||||||||||.|||||||||||.|||.||||.||.||||||||||||||||||
Sbjct 149 TTAGTGGGACTAGTTCGAACTATGTGGAGGAAATGTACTGTGCCTGGTTGGAGAATCCCAAAAGTGTACATAAG 222
Query 223 TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT 296
|||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.||||||.||||
Sbjct 223 TCATGGGACATTTTTTTCCGAAACACCAATGCTGGAGCCCCACCGGGCACTGCCTACCAGAGCCCCCTTTCCCT 296
Query 297 GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG 370
|||.|||.|||||||||||.|..||||||||||||||||||||||.||||||||.||.|||||.|||||.||||
Sbjct 297 GAGTCGAAGCTCCCTGGCTACCATGGCCCATGCACAGTCCCTGGTGGAAGCACAACCTAACGTCGACAAACTCG 370
Query 371 TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC 444
|||||||||||.||||.||||||||.||||||||||||||||||.|..|.||.|||||..|.|||.|.||.||.
Sbjct 371 TGGAGGACCACTTGGCGGTGCAGTCTCTCATCAGGGCATATCAGGTCAGGGGTCACCACATTGCAAAACTTGAT 444
Query 445 CCCCTGGGGATT--TTG----GATGCTGATCTGGACTCCTCCGTGC-CCGCTGACATTATCTCATCCACAGACA 511
||.||.||.||| ||| .||..|||| || ||| |||.|.||..|.||| .||
Sbjct 445 CCTCTCGGAATTAGTTGTGTAAATTTTGAT---GA--------TGCTCCGGTAACTGTTTCT---------TCA 498
Query 512 AAC-TTGGGTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGG 584
||| |.||||||||||||||..|.|||||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 499 AACGTGGGGTTCTATGGCCTACACGAGTCTGACCTTGACAAGGTCTTCCACTTACCCACCACCACTTTCATCGG 572
Query 585 GGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGG 658
|||||||||..|||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct 573 GGGACAGGAGCCAGCACTTCCTCTTCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCACATTGGTG 646
Query 659 TGGAGTTCATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATG 732
||||||||||||||||.|||||..||||.||.||||||||||||||.||||||||||||||||||||.||||||
Sbjct 647 TGGAGTTCATGTTCATTAATGATTTGGAACAATGCCAGTGGATCCGACAGAAGTTTGAGACCCCTGGAATCATG 720
Query 733 CAGTTCACAAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACA 806
||||||||.|||||||||||.||||||.||||||||||||||||.||.||||||||||||||||||||||||||
Sbjct 721 CAGTTCACCAATGAGGAGAAGCGGACCTTGCTGGCCAGGCTTGTACGATCCACCAGGTTTGAGGAGTTCCTACA 794
Query 807 GCGGAAGTGGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCA 880
|||.|||||||||||.||||||||.||||||||.||||||||.|||||.||||||||||||||||||||.||||
Sbjct 795 GCGAAAGTGGTCCTCGGAGAAGCGTTTTGGTCTGGAAGGCTGTGAGGTGCTGATCCCTGCCCTCAAGACAATCA 868
Query 881 TTGACAAGTCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTT 954
||||.|.|||.||||..|||||.||||||||.|||||||||||.||||||||||||||.|||||||||||||||
Sbjct 869 TTGATATGTCAAGTGCAAATGGAGTGGACTATGTGATCATGGGGATGCCACACAGAGGACGGCTGAACGTGCTT 942
Query 955 GCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGG 1028
||||||||||||||||||||||||||.||.||.||||||||.||.||.||||||||||||||||||||||||||
Sbjct 943 GCAAATGTCATCAGGAAGGAGCTGGAGCAAATATTCTGTCAGTTTGACTCAAAGCTGGAGGCAGCTGATGAGGG 1016
Query 1029 CTCCGGAGATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCT 1102
.||.||.||..|||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.|
Sbjct 1017 TTCTGGGGACATGAAGTACCACCTGGGCATGTATCACCGCAGGATCAACCGTGTGACCGACAGAAACATCACTT 1090
Query 1103 TGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAG 1176
|||||||||||||.|||||||||||.||.|||||.||||||||.||.||||||||.|||||||||||.||||||
Sbjct 1091 TGTCCTTGGTGGCTAACCCTTCCCATCTAGAGGCTGCTGACCCTGTCGTGATGGGAAAGACCAAAGCTGAACAG 1164
Query 1177 TTTTACTGTGGCGACACTGAAGGGAAAAAGGTAAGGCC----------CAGAGAGAGGC-----GTGCAAGGCA 1235
||.||||||||.||||||||||||||||||||.|.|.| ||..|.||.|| .|||..|.||
Sbjct 1165 TTCTACTGTGGAGACACTGAAGGGAAAAAGGTGATGTCTATCCTGCTGCATGGGGATGCTGCTTTTGCTGGCCA 1238
Query 1236 G---ATCGTCA----AGGCC--CCATGTTCCAGCATGGAGTT-CCG--CT-CAC-------------------- 1276
| ||||| | ||.|| ||||.| |||| ||.|| ||| || |||
Sbjct 1239 GGGCATCGT-ATATGAGACCTTCCATCT--CAGC---GACTTGCCGTCCTACACAACCCATGGCACTGTTCATG 1306
Query 1277 -------CAACA-------------------------------------------------------------- 1281
|||||
Sbjct 1307 TGGTTGTCAACAACCAGATTGGCTTCACCACAGACCCTCGGATGGCCCGCTCCTCTCCCTACCCCACTGATGTG 1380
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1381 GCCCGAGTGGTGAATGCCCCCATTTTCCATGTCAACTCAGATGACCCTGAAGCTGTCATGTATGTATGCAAGGT 1454
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1455 GGCAGCTGAGTGGAGAAACACCTTCCACAAGGATGTTGTAGTTGATCTGGTGTGTTATCGACGAAATGGCCACA 1528
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1529 ATGAGATGGACGAACCTATGTTTACACAGCCACTCATGTACAAGCAGATCCGCAAGCAGAAGCCTGTACTGCAG 1602
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1603 AAGTATGCAGAATTGCTAGTCTCCCAGGGTGTCGTCAATCAGCCTGAGTACGAGGAGGAAATCTCCAAGTATGA 1676
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1677 TAAGATCTGTGAGGAAGCATTTACCAGATCCAAAGATGAGAAGATCTTGCACATCAAGCACTGGCTGGATTCCC 1750
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1751 CCTGGCCTGGCTTTTTCACCCTGGATGGACAGCCCAGGAGCATGACCTGCCCCTCCACTGGCCTGGAGGAGGAT 1824
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1825 GTCTTGTTCCACATTGGAAAGGTGGCCAGCTCTGTACCTGTGGAGAACTTTACTATCCATGGAGGGCTGAGCCG 1898
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1899 GATCTTGAAGACCCGCAGAGAGCTTGTGACGAACCGGACTGTGGACTGGGCCCTGGCAGAGTACATGGCATTTG 1972
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1973 GCTCACTGCTGAAGGAAGGCATCCATGTGCGGCTGAGTGGCCAGGATGTGGAGCGGGGCACCTTCAGCCATCGC 2046
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2047 CACCATGTGCTCCATGATCAGAATGTTGACAAAAGAACCTGCATCCCCATGAACCACCTTTGGCCAAATCAGGC 2120
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2121 CCCTTACACTGTATGCAACAGCTCGCTGTCTGAGTACGGTGTCCTGGGCTTTGAGCTGGGCTTTGCCATGGCTA 2194
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2195 GCCCTAATGCTCTGGTTCTCTGGGAGGCCCAGTTTGGTGACTTCAACAACATGGCACAGTGCATCATTGACCAG 2268
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2269 TTCATCTGCCCAGGACAGGCAAAGTGGGTGCGGCAGAATGGCATTGTGCTCCTGCTGCCTCATGGCATGGAAGG 2342
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2343 CATGGGTCCCGAGCATTCCTCTGCCCGCCCAGAGCGGTTTCTGCAGATGTGCAATGATGACCCAGATGTCCTGC 2416
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2417 CTGACCTGCAGGAAGAAAACTTTGACATCAATCAGCTCTATGACTGCAACTGGATTGTTGTCAACTGTTCCACC 2490
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2491 CCTGGCAACTTCTTCCATGTGCTGCGACGACAGATCTTGCTGCCCTTCCGGAAGCCGTTAATCGTCTTCACTCC 2564
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2565 CAAATCCCTCCTGCGCCACCCTGAGGCAAGAACTAGCTTTGACGAGATGCTGCCAGGAACGCACTTCCAGCGTG 2638
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2639 TGATCCCAGAAAATGGACCTGCAGCTCAGGACCCACACAAAGTCAAGAGACTTCTCTTCTGCACTGGGAAGGTG 2712
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2713 TACTATGACCTCACCCGAGAGCGCAAAGCCAGGAACATGGAGGAGGAGGTGGCTATTACAAGGATTGAGCAGCT 2786
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2787 ATCACCATTCCCCTTTGACCTCCTGCTGAAAGAGGCACAGAAGTATCCCAATGCTGAGCTGGCCTGGTGCCAGG 2860
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2861 AAGAGCACAAGAACCAAGGCTACTATGACTATGTCAAGCCAAGACTTCGTACCACCATTGACCGTGCTAAGCCT 2934
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2935 GTCTGGTATGCTGGCCGAGACCCGGCAGCTGCTCCAGCCACTGGCAACAAGAAAACACACCTGACAGAGCTGCA 3008
Query 1282 ------------------------------------------------- 1281
Sbjct 3009 GCGCTTTCTGGACACAGCCTTTGACCTGGACGCATTCAAGAAATTCTCT 3057
