Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15542
Subject:
NM_001310596.1
Aligned Length:
765
Identities:
475
Gaps:
246

Alignment

Query   1  ATGAGCTCAATCGGCACTGGGTATGACCTGTCAGCCTCTACATTCTCTCCTGACGGAAGAGTTTTTCAAGTTGA  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  ATATGCTATGAAGGCTGTGGAAAATAGTAGTACAGCTATTGGAATCAGATGCAAAGATGGTGTTGTCTTTGGGG  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  TAGAAAAATTAGTCCTTTCTAAACTTTATGAAGAAGGTTCCAACAAAAGACTTTTTAATGTTGATCGGCATGTT  222
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 223  GGAATGGCAGTAGCAGGTTTGTTGGCAGATGCTCGTTCTTTAGCAGACATAGCAAGAGAAGAAGCTTCCAACTT  296
              ||||||||.|||||||||.||||||||||||||||.||||||||||||||.|||||||||||.||||||||
Sbjct   1  ---ATGGCAGTTGCAGGTTTGCTGGCAGATGCTCGTTCATTAGCAGACATAGCGAGAGAAGAAGCATCCAACTT  71

Query 297  CAGATCTAACTTTGGCTACAACATTCCACTAAAACATCTTGCAGACAGAGTGGCCATGTATGTGCATGCATATA  370
           .||.||.|||||.|||||.||||||||.|||||||||||||||||||||||||||||||||||.||.||.||||
Sbjct  72  TAGGTCCAACTTCGGCTATAACATTCCTCTAAAACATCTTGCAGACAGAGTGGCCATGTATGTACACGCCTATA  145

Query 371  CACTCTACAGTGCTGTTAGACCTTTTGGCTG---------------------CAGTGTGAATGACGGTGCGCAA  423
           ||||||||||.||||||||||||||||||||                     |||||.||||||.|||||.||.
Sbjct 146  CACTCTACAGCGCTGTTAGACCTTTTGGCTGCAGTTTCATGTTGGGGTCTTACAGTGCGAATGATGGTGCACAG  219

Query 424  CTCTACATGATTGACCCATCAGGTGTTTCATACGGTTATTGGGGCTGTGCCATCGGCAAAGCCAGGCAAGCTGC  497
           |||||.|||||.||||||||||||||||||||.|||||.|||||||||||.||.||||||||||||||.|||||
Sbjct 220  CTCTATATGATCGACCCATCAGGTGTTTCATATGGTTACTGGGGCTGTGCGATTGGCAAAGCCAGGCAGGCTGC  293

Query 498  AAAGACGGAAATAGAGAAGCTTCAGATGAAAGAAATGACCTGCCGTGATATCGTTAAAGAAGTTGCAAAAATAA  571
           ||||||.||.|||||.||||||||||||||.||||||||.|||||||||.|.||||||||||||||||||||||
Sbjct 294  AAAGACAGAGATAGAAAAGCTTCAGATGAAGGAAATGACTTGCCGTGATGTAGTTAAAGAAGTTGCAAAAATAA  367

Query 572  TTTACATAGTACATGACGAAGTTAAGGATAAAGCTTTTGAACTAGAACTCAGCTGGGTTGGTGAATTAACTAAT  645
           |||||||||||||.||.||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.
Sbjct 368  TTTACATAGTACACGATGAAGTTAAGGATAAAGCTTTTGAACTGGAGCTCAGCTGGGTTGGTGAATTAACTAAA  441

Query 646  GGAAGACATGAAATTGTTCCAAAAGATATAAGAGAAGAAGCAGAGAAATATGCTAAGGAATCTCTGAAGGAAGA  719
           ||||||||||||||||||||.|||||.||||||||.|||||||||||||||||.|||||||||.||||||||||
Sbjct 442  GGAAGACATGAAATTGTTCCCAAAGACATAAGAGAGGAAGCAGAGAAATATGCCAAGGAATCTTTGAAGGAAGA  515

Query 720  AGATGAATCAGATGATGATAATATG  744
           ||||||||||||||||||.||||||
Sbjct 516  AGATGAATCAGATGATGACAATATG  540