Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15551
- Subject:
- NR_028293.2
- Aligned Length:
- 1988
- Identities:
- 1118
- Gaps:
- 867
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCTCGCCACCAGAGGTTTCCCAGAGAGGAAGGCGTGGCTCCCTCCCGGGCCAGTGAGCCCTGGCGCCGCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGCGGTCCCAGCAGCGGAGTAGGGCGGCGGCTGCGCCCCGCACCATGGGGGGCAGCCCAGCCCCAGCCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAAACGCCGACCTCCGCCGCCGCCCGCGCCGCGTCTGCCCCCTCCCGCTGCGGCTCTCTGGACGCCATCCCCTC 222
Query 1 -----------------ATGAAGGAGACCCGGGGCTACGGAGGGGATGCCCCCTTCTGCACCCGCCTCAACCAC 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCACCTCGAAGCCAACATGAAGGAGACCCGGGGCTACGGAGGGGATGCCCCCTTCTGCACCCGCCTCAACCAC 296
Query 58 TCCTACACAGGCATGTGGGCGCCCGAGCGTTCCGCCGAGGCGCGGGGCAACCTCACGCGCCCTCCAGGGTCTGG 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCTACACAGGCATGTGGGCGCCCGAGCGTTCCGCCGAGGCGCGGGGCAACCTCACGCGCCCTCCAGGGTCTGG 370
Query 132 CGAGGATTGCGGATCGGTGTCCGTGGCCTTCCCGATCACCATGCTGCTCACTGGTTTCGTGGGCAACGCACTGG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CGAGGATTGCGGATCGGTGTCCGTGGCCTTCCCGATCACCATGCTGCTCACTGGTTTCGTGGGCAACGCACTGG 444
Query 206 CCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGGGAGAGCAAGCGCAAGAAGTCCTTCCTGCTGTGCATCGGC 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGGGAGAGCAAGCGCAAGAAGTCCTTCCTGCTGTGCATCGGC 518
Query 280 TGGCTGGCGCTCACCGACCTGGTCGGGCAGCTTCTCACCACCCCGGTCGTCATCGTCGTGTACCTGTCCAAGCA 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGCTGGCGCTCACCGACCTGGTCGGGCAGCTTCTCACCACCCCGGTCGTCATCGTCGTGTACCTGTCCAAGCA 592
Query 354 GCGTTGGGAGCACATCGACCCGTCGGGGCGGCTCTGCACCTTTTTCGGGCTGACCATGACTGTTTTCGGGCTCT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCGTTGGGAGCACATCGACCCGTCGGGGCGGCTCTGCACCTTTTTCGGGCTGACCATGACTGTTTTCGGGCTCT 666
Query 428 CCTCGTTGTTCATCGCCAGCGCCATGGCCGTCGAGCGGGCGCTGGCCATCAGGGCGCCGCACTGGTATGCGAGC 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTCGTTGTTCATCGCCAGCGCCATGGCCGTCGAGCGGGCGCTGGCCATCAGGGCGCCGCACTGGTATGCGAGC 740
Query 502 CACATGAAGACGCGTGCCACCCGCGCTGTGCTGCTCGGCGTGTGGCTGGCCGTGCTCGCCTTCGCCCTGCTGCC 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CACATGAAGACGCGTGCCACCCGCGCTGTGCTGCTCGGCGTGTGGCTGGCCGTGCTCGCCTTCGCCCTGCTGCC 814
Query 576 GGTGCTGGGCGTGGGCCAGTACACCGTCCAGTGGCCCGGGACGTGGTGCTTCATCAGCACCGGGCGAGGGGGCA 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTGCTGGGCGTGGGCCAGTACACCGTCCAGTGGCCCGGGACGTGGTGCTTCATCAGCACCGGGCGAGGGGGCA 888
Query 650 ACGGGACTAGCTCTTCGCATAACTGGGGCAACCTTTTCTTCGCCTCTGCCTTTGCCTTCCTGGGGCTCTTGGCG 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACGGGACTAGCTCTTCGCATAACTGGGGCAACCTTTTCTTCGCCTCTGCCTTTGCCTTCCTGGGGCTCTTGGCG 962
Query 724 CTGACAGTCACCTTTTCCTGCAACCTGGCCACCATTAAGGCCCTGGTGTCCCGCTGCCGGGCCAAGGCCACGGC 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGACAGTCACCTTTTCCTGCAACCTGGCCACCATTAAGGCCCTGGTGTCCCGCTGCCGGGCCAAGGCCACGGC 1036
Query 798 ATCTCAGTCCAGTGCCCAGTGGGGCCGCATCACGACCGAGACGGCCATTCAGCTTATGGGGATCATGTGCGTGC 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCTCAGTCCAGTGCCCAGTGGGGCCGCATCACGACCGAGACGGCCATTCAGCTTATGGGGATCATGTGCGTGC 1110
Query 872 TGTCGGTCTGCTGGTCTCCGCTCCTGATAATGATGTTGAAAATGATCTTCAATCAGACATCAGTTGAGCACTGC 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGTCGGTCTGCTGGTCTCCGCTCCTGATAATGATGTTGAAAATGATCTTCAATCAGACATCAGTTGAGCACTGC 1184
Query 946 AAGACACACACGGAGAAGCAGAAAGAATGCAACTTCTTCTTAATAGCTGTTCGCCTGGCTTCACTGAACCAGAT 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAGACACACACGGAGAAGCAGAAAGAATGCAACTTCTTCTTAATAGCTGTTCGCCTGGCTTCACTGAACCAGAT 1258
Query 1020 CTTGGATCCTTGGGTTTACCTGCTGTTAAGAAAGATCCTTCTTCGAAAGTTTTGCC---AGATG---------- 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1259 CTTGGATCCTTGGGTTTACCTGCTGTTAAGAAAGATCCTTCTTCGAAAGTTTTGCCAGGAGATGGGGCCTGATG 1332
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1333 GAAGGTGTTTTTGTCATGCATGGAGGCAGGTCCCCAGGACTTGGTGCAGTTCTCATGATAGAGAACCCTGCAGT 1406
Query 1081 -----------------------AGAAAAA------------------GAAG---------ACTCA----GAGA 1100
|||.||| |||| ||| | ||.|
Sbjct 1407 GTCCAGCTAAGCTGATGACTTGAAGATAAATCTGCCTAACCCTGGGATGAAGTATCTGTGAACT-ATTTTGACA 1479
Query 1101 GC--AAGAGGAATTTTGGGGAAAT-------------------------------------------------- 1122
|| |.||||||||||||||||||
Sbjct 1480 GCAGATGAGGAATTTTGGGGAAATTAAAACCTGCCTTTCTGCCAGGATCACATCACTGGAAGCTCCATGACTCT 1553
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1554 CTTTTTGTAAAAGAAAAAAAAATCACAGAAACACCCACCTCCCAAACTATTCTCTTTTACTTCTTCCCCCAAGC 1627
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1628 CCACCCCCAAATATAACTGTTATCCAGAAGCTGTTATGTCCTGTTTCCATACATGTTTTTGTACTTTTACTATA 1701
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1702 TCTACATACATCAATTAAACTTATGTCCTATTGTTTTGTGAATTTATATTTGCGTATACATTATCATATGTAAA 1775
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1776 ATTTGCATTTTTTTATTGAAAATTATGTTTCTTGAGATTTATCCACATTGAAACATGGAGCTCTAAATCGTTAA 1849
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1850 TTTTAACCGCTATAGAGTATTCCATAATTTGAATAAAGCATAATTTGTTTGTACAATCTCCCGCCAAGGGAAAA 1923
Query 1123 ---------------------------------------------------------------- 1122
Sbjct 1924 TTATTTCCACACTCATCATGACAAGGAGCACTGCAAAAATAAAAATAAAAATTACATTCATACA 1987
