Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15665
• Subject: NM_001305436.1
• Aligned Length: 1048
• Identities: 668
• Gaps: 269

Alignment

Query    1  ATGTCTTCCTTAAGTGGAAAAGTCCAAACCGTTTTGGGCCTTGTAGAGCCAAGCAAACTGGGCCGTACCCTGAC  74
            |||||||||||||||||.|||||.|||||.|||.|||||||||||||.||.|||.|||||||.||.||||||||
Sbjct    1  ATGTCTTCCTTAAGTGGGAAAGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGAC  74

Query   75  CCATGAACACCTGGCCATGACCTTTGACTGCTGTTACTGTCCACCTCCCCCGTGCCAGGAAGCTATTTCCAAAG  148
            |||.||.||.|||.|.||||||||||||.|.|.||||||.||||||||.||.|||||.||||..|..|||||.|
Sbjct   75  CCACGAGCATCTGACAATGACCTTTGACAGTTTTTACTGCCCACCTCCTCCATGCCACGAAGTCACCTCCAAGG  148

Query  149  AACCTATCGTGATGAAAAATTTATATTGGATTCAGAAAAACGCCTATTCCCATAAAGAAAACCTTCAATTAAAT  222
            ||||||||.|||||||||||.|||.||||||||||||||||.|||||||||||..|||.||||||||.||.|||
Sbjct  149  AACCTATCATGATGAAAAATCTATTTTGGATTCAGAAAAACCCCTATTCCCATCGAGAGAACCTTCAGTTGAAT  222

Query  223  CAGGAGACAGAAGCCATAAAGGAAGAACTGTTGTATTTTAAAGCTAATGGTGGAGGGGCTTTGGTGGAAAACAC  296
            ||||||..||.||||||||..|||||.|||||||||||.||.|||||.||.|||||.||.||||||||.||.||
Sbjct  223  CAGGAGGTAGGAGCCATAAGAGAAGAGCTGTTGTATTTCAAGGCTAAGGGCGGAGGAGCCTTGGTGGAGAATAC  296

Query  297  AACCACTGGGATTAGCCGAGACACACAGACGTTGAAGAGGCTTGCAGAAGAGACTGGCGTCCATATCATATCTG  370
            .||.||||||.|.|||.|.|||...||.|||.|||||.||||.|||||..|||||||.|||||.||||||.|||
Sbjct  297  GACAACTGGGCTCAGCAGGGACGTGCATACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTCCACATCATAGCTG  370

Query  371  GAGCCGGGTTTTATGTGGATGCAACTCACTCCTCAGAGACCAGGGCCATGTCAGTGGAGCAGCTTACCGATGTC  444
            ||||.|||||||||||.||||||||||||||..|||..|||||.|||||||||||||||||||||||.||||||
Sbjct  371  GAGCTGGGTTTTATGTTGATGCAACTCACTCTGCAGCAACCAGAGCCATGTCAGTGGAGCAGCTTACAGATGTC  444

Query  445  CTTATGAATGAAATTCTCCATGGAGCTGATGGAACCAGTATCAAGTGTGGCATTATTGGAGAAATTGGTTGCTC  518
            |||||.||||||||||||||||||||||||||.|||||.|||||||||||..||||||||||||||||.|||||
Sbjct  445  CTTATTAATGAAATTCTCCATGGAGCTGATGGCACCAGCATCAAGTGTGGAGTTATTGGAGAAATTGGCTGCTC  518

Query  519  CTGGCCTTTGACTGAGAGTGAAAGAAAGGTTCTCCAGGCCACAGCTCATGCCCAGGCTCAGCTTGGTTGTCCTG  592
            |||||||||||||||.||.||.||||||.|.||..||||.||||||||.|||||||||||||||||.|||||||
Sbjct  519  CTGGCCTTTGACTGACAGCGAGAGAAAGATACTTGAGGCTACAGCTCACGCCCAGGCTCAGCTTGGCTGTCCTG  592

Query  593  TTATTATCCATCCTGGACGGAGCTCCAGG-GCACCATTCCAGATTATCCGAATATTGCAAGAAGCAGGCGCAGA  665
            |.||.||||||||||||||||.| ||||| ||||||||||||||.|||||.|||.|||||||||||||.|||||
Sbjct  593  TCATCATCCATCCTGGACGGAAC-CCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGA  665

Query  666  CATCTCCAAAACAGTCATGTCACACCTGGATAGGACTATTCTTGATAAGAAAGAGCTCTTGGAGTTTGCTCAGC  739
            |||||||||||||||||||||.|||||.||.||||||||..||||||||||||||||..|||||||||||||.|
Sbjct  666  CATCTCCAAAACAGTCATGTCCCACCTTGACAGGACTATATTTGATAAGAAAGAGCTGCTGGAGTTTGCTCAAC  739

Query  740  TTGGCTGCTACTTGGAATATGATCTCTTTGGTACTGAACTACTTCATTACCAACTCGGCCCAGATATTGACATG  813
            |||||||||||||||||||.|||||||||||          .|.||||..|                       
Sbjct  740  TTGGCTGCTACTTGGAATACGATCTCTTTGG----------GTCCATTTTC-----------------------  780

Query  814  CCTGATGATAACAAAAGAATTAGAAGGGTGCGTCTCCTGGTGGAAGAGGGCTGTGAAGATCGAATTCTGGTAGC  887
                                                                                      
Sbjct  781  --------------------------------------------------------------------------  780

Query  888  ACATGACATACATACGAAAACCCGGCTGATGAAATATGGAGGTCACGGCTATTCTCATATACTCACCAATGTTG  961
                                                                                      
Sbjct  781  --------------------------------------------------------------------------  780

Query  962  TTCCTAAAATGTTGCTGAGAGGCATAACTGAGAATGTGCTTGATAAGATTCTAATAGAGAACCCTAAGCAATGG  1035
                                                                                      
Sbjct  781  --------------------------------------------------------------------------  780

Query 1036  CTAACTTTCAAA  1047
                        
Sbjct  781  ------------  780