Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15693
- Subject:
- NM_016703.3
- Aligned Length:
- 1255
- Identities:
- 898
- Gaps:
- 224
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGTCGGCGCCGGGGTGTGGAGCTGTACCGGGCCCCGTTCCCGTTGTACGCGCTTCGGATAGACCCCAAGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGGCTGCTCATCGCTGCGGGCGGAGGAGGAGCTGCCAAGACCGGCATAAAGAATGGCGTGCATTTTCTGCAGC 148
Query 1 --------------------------------------------------------------------ATGAAC 6
|||||.
Sbjct 149 TAGAGCTGATCAACGGGTGCCTGAGCGCTTCCTTGCTGCACTCTCATGACACGGAGACACGGGCCACCATGAAT 222
Query 7 TTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCAGGCACATCA 80
|||||.||.|||||||||||.||||||||.||.|||||||||||.||||||||.||.||.|||||||..|||||
Sbjct 223 TTGGCGCTTGCTGGTGACATTCTTGCTGCCGGACAGGATGCCCAGTGTCAGCTTCTTCGTTTCCAGGTCCATCA 296
Query 81 ACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAG 154
||||.||||||..||.||.||||||.|.|||||||||||||||||.||||||||.||.|||||.||..|.||||
Sbjct 297 ACAGAAGGGCAGTAAAGCGGAGAAGTCAGGTTCCAAGGAGCAGGGACCTCGACAGAGAAAGGGGGCTCCTCCAG 370
Query 155 CAGAGAAGAAATGTGGAGCGGAA----ACCCAGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGCAGGCGGT 224
||||||||||||..|||||..|| |||| |||.|||.|.|||||||..|||.||||||||.||||.||
Sbjct 371 CAGAGAAGAAATCGGGAGCACAAGTTCACCC----CGAAGGGGTTGAACTCAAAGTAAAGAATTTGGAGGCAGT 440
Query 225 GCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACCCTGCTTGCCACTG 298
.|||||||||||.|||...||.||.||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct 441 ACAGACAGACTTCAGCAATGAACCGCTGCAGAAAGTTGTGTGCTTCAACCATGATAACACCCTGCTTGCCACTG 514
Query 299 GAGGAACAGATGGCTACGTCCGTGTCTGGAAGGTGCCCAGCCTGGAGAAGGTTCTGGAGTTCAAAGCCCACGAA 372
|||||||.|||||..|.||.||||||||||||||.||.|||||||||||.||||||||||||||||||||.|||
Sbjct 515 GAGGAACTGATGGTCATGTTCGTGTCTGGAAGGTACCTAGCCTGGAGAAAGTTCTGGAGTTCAAAGCCCATGAA 588
Query 373 GGGGAGATTGAAGACCTGGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGGGCCGGGACCTTAAGGCCTCTGT 446
||||||||||.|||..||.||||.||.||||||||||||.||||.||.||||||.|||||.|||||||||||||
Sbjct 589 GGGGAGATTGGAGATTTGACTTTGGGTCCTGATGGCAAGCTGGTTACAGTGGGCTGGGACTTTAAGGCCTCTGT 662
Query 447 GTGGCAGAAGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACC 520
|||||||||||||||.||||||||||||||.||.||||||||.||||||||..|||.|||.|..|||||.||||
Sbjct 663 GTGGCAGAAGGATCAACTGGTGACACAGCTACAGTGGCAAGAGAATGGACCAGCCTCTTCTAATACACCATACC 736
Query 521 GCTACCAGGCCTGCAGGTTTGGGCAGGTTCCAGACCAGCCTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCC 594
||||||||||||||||||||||||||||||||||.||||..|.|||.||||||||||||||||||||.||.|||
Sbjct 737 GCTACCAGGCCTGCAGGTTTGGGCAGGTTCCAGATCAGCTCGGTGGGCTGCGACTCTTCACAGTGCAGATACCC 810
Query 595 CACAAGCGCCTGCGCCAGCCCCCTCCCTGCTACCTCACAGCCTGGGATGGCTCCAACTTCTTGCCCCTTCGGAC 668
|||||||||||.||.||||||||.|||||||||||||||||||||||..|.||||.|||||||||.||||||||
Sbjct 811 CACAAGCGCCTACGTCAGCCCCCACCCTGCTACCTCACAGCCTGGGACAGTTCCACCTTCTTGCCTCTTCGGAC 884
Query 669 CAAGTCCTGTGGCCATGAAGTCGTCTCCTGCCTCGATGTCAGTGAATCCGGCACCTTCCTAGGCCTGGGCACAG 742
||..||||||||||||||.|||.|.|||||||||..|||||||||.||.||.||||||||||||||.|||||.|
Sbjct 885 CAGATCCTGTGGCCATGAGGTCATTTCCTGCCTCAGTGTCAGTGATTCGGGTACCTTCCTAGGCCTAGGCACGG 958
Query 743 TCACTGGCTCTGTTGCCATCTACATAGCTTTCTCTCTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATT 816
|||||||||||||.|||||||||||||||||||||||||||.||||.||.||.||||.||||||||||||||||
Sbjct 959 TCACTGGCTCTGTCGCCATCTACATAGCTTTCTCTCTCCAGCGCCTGTATTATGTGAAGGAGGCCCATGGCATT 1032
Query 817 GTGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCT 890
|||||.||.||||||.||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||.||
Sbjct 1033 GTGGTAACAGATGTGACCTTTCTACCTGAGAAGGGTTGTGGTCCAAAGCTCCTTGGGCCCCATGAAACTGCTCT 1106
Query 891 GTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGTGGCTCC 964
.|||||||||||||||||.||||||||||||.||||.|||.||||.||||||||||||||||||||.|||||.|
Sbjct 1107 TTTCTCTGTGGCTGTGGATAGTCGTTGCCAGTTGCACCTGCTGCCTTCACGGCGGAGTGTTCCTGTATGGCTTC 1180
Query 965 TGCTCCTGCTGTGTGTCGGGCTTATTATTGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGGTTTCCTT 1035
|||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||.||.||.||.||.
Sbjct 1181 TGCTCCTGCTGTGTGTCGGCCTTATTATTGTGACCATCCTGCTGCTCCAGACTGCCTTCCCGGGATTTCTC 1251