Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15802
- Subject:
- XR_002958477.1
- Aligned Length:
- 2556
- Identities:
- 333
- Gaps:
- 2197
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCACTTCCGGCGCACTGATCCCGCCTGGGGCCGGCTGAGTGGCACTTAAGCGGGCCATGCCATGCAACCTTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCTGCCAACCGTGGGCGAGCTCTGGGTGTGCGGGCGGCCTGGCGCGGCGCTCCGATGGAGTCTAGTTCTGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCAGGCTGGAGCCCAGTGGTGTGATCTCAGCTCACTGCAATCTCCACCTCCTGGCTTCAAGCGATTCTTCTG 222
Query 1 -----------------------------ATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGT 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTCAGCCTCCCGACTGTGTCAGCGTGTTATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGT 296
Query 46 AAAGTGAAATATTCAAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCAAA 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 297 AAAGTGAAATATTCAAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAA 370
Query 120 GATCCCTTATAAGGCCATCGCACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GATCCCTTATAAGGCCATCGCACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCC 444
Query 194 TCCTGCTGTCAGGCTACATCAGCAAAGGG-------------------GGG-----------GCAGACC----- 232
||||||||||||||||||||||||||||| ||| ||.||||
Sbjct 445 TCCTGCTGTCAGGCTACATCAGCAAAGGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAA 518
Query 233 ------------------GGG-------------------------------CCG------------------- 238
||| |||
Sbjct 519 CATCTACCAGCATCCCGTGGGTACATGATGGGAGGCATCAGTGGGAGGAGTCCCGAAGGAGGACTCAGCTCAAG 592
Query 239 --TTCCA-------------------------------------GTGCTGATCATTGGCATTCTGGT----GTT 269
||||| ||.||||.||.|||.|..|.||| |||
Sbjct 593 GCTTCCAGAAGGAAGAGGAACACAGGTGTCATCACCTGACTGAGGTTCTGACCAATGGAACACAGGTGGAAGTT 666
Query 270 -------------CCT---ACCCGGA-----------------------------TTTTA-----CCACCTGC- 292
||| |.|.||| ||||| ||||||||
Sbjct 667 GTTGGAGAAAACGCCTTAAAACGGGAACAGCTGCAATATCAGCTGCAAGACATTCTTTTACCTTTCCACCTGCC 740
Query 293 ---------------------------GCATCGCTTACT--------------------ATGCAT--------- 310
||.|.||..||| |||.||
Sbjct 741 TGGGACCTGGATGTGGAACTGCAGTGTGCCTTGCAAACTTGAAGAGAACGACCTTGATAATGGATGGTGAAGCA 814
Query 311 -----------CCAAAGGCT-ACCGTGGTTACTC----------------------------CTATGATG---A 341
||..||||| |.||..||.|||| |||.|.|| |
Sbjct 815 AGAAAGAGGAGCCTGAGGCTGAGCGCAGTGACTCACACCTGTAATCCCAGCACTTTGGGAGGCTAAGGTGGGCA 888
Query 342 CATT--------CCA-GACTTTGATGAC---------------------------------------------- 360
.||| ||| ||.||||| |||
Sbjct 889 GATTGCTTGAGCCCAGGAATTTGA-GACCAGCCTGGATAACGCGTGGTGGGCAGTTCCAGGACACCTGACATGT 961
Query 361 -------------------------------------------------------------------------- 360
Sbjct 962 TCCCACTGCAGAAACCACACGGGTTTCTCCAGCACCACTGAGACTTGCTCAGCCTGTGTAGAGTAGCCTGGACA 1035
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1036 TACTGGGGCTTTATTTTCCTGAGGACAACCCTCAACCAATGAGTGCCAGGAATCATTTTGCCTTTTCTGGGATG 1109
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1110 CTCCAGAACTCTAGGAGGACAAAAAAGCCCTTCATGTCCAACATTAGAGGAAGGCAGCATCCTCCAAAGAAGAG 1183
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1184 TGACTCACCCTGACCAGCTGGCAGAGAAGCCCAAGGCCAGGCCCTGGGATGTGGAGAGCCAGTCCCAGCCTGGT 1257
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1258 CTGGAAGGAGGCGTGCCAGGGTGGCAATGATGCATCACCCACGTGGTTTACTGGCCTTGACTAACCTGACCATG 1331
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1332 ACTTAGCAAAGCTGTGAGGTTTCCCAGTCTGGGCCAATATGGGTGTGCGGGTAGAATACAGCCAGCATGGGGAG 1405
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1406 GCGAAGGCCTGAGCAGCATGCCAAAACCGGGAACTTGTGGCCTCCTTCGCCATCACCGCAGCCCCTCTCCACCC 1479
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1480 TTCCTCACATCAGCCCCTGCTTCCCCGGTCATTCCAGGGACGGGGGTCTCCAGTGCAGCCCACTCCTCGTCATG 1553
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1554 GTATTACTCCAGTACAACTCCAATCTGACCTACAGTTTTGGTGTTTGGCATGGCAGGGGCGTGATCCCTACTAC 1627
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1628 ATACAACCAGTGAGTCACAGACCTTTGGTCCAGTCTGTGGACTGGTCACTTCCTGTCCTTCATATGAGCTCCCA 1701
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1702 CAGAACCCGGGTCCTGCTCCAGAGCCCAGGCGTTAGACAGGCCCTGGCCTTAACCCGGTTATCTCAGAGGCATC 1775
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1776 CCACATGCGTCCAGGACACCTGGGAAGCTGGTGGTAGTGAGGAGTGAAGGGCAGTAGGGGGCCTCTGCTCTGGC 1849
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1850 CCCCTGGCTTCCTGCAAGCCAGGAAAATAGGCCCCACTCACAGCCACTTCTCCCCTGCTGGCTAGCCTCAAAGA 1923
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1924 GATCATTAGAGGGACTTTGCTGCCCATAACAACAAGGACCATTGGTGAAAACAAGCAGCTCAGGGAAATGGATC 1997
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1998 ATGGAAATCACAGAAACAGAGATTTCTCTGTTCCCATCCCCTAAGATCACCAGTGCCCCTGCTCCTGACAATTG 2071
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2072 GTCACCTCTCAGCCAACATCTGAGCCTCTGGTGTCCCTTCCTTGTGACAGAGTTCATGATACTCATGGGTTATT 2145
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2146 TCAATGCATTGGGAAGTTAATCTTTTTTTTTTTGAGAGATGGGGTCTTGCCATGTTGCCTAGGCTGTTCTCAAA 2219
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2220 CTCGAGCTCAGGTGATCTTTCCCACCTCGGCCTCCCAAAGTGCTGGGATCACAGGTGAGAGCCACCACACCTGG 2293
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2294 CTGAGGAAGTTAGTCTTTATAATGAGACTAAACCTGCCTTCCTATATTTTTCATCTTTTCATGTGCTTATTGGA 2367
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2368 TATTTGCATTTCATTCATGGAAAAAAAAAGATATCTTTTTGGTTTTTGTTTTTTTAATAGAGATGAGATCTCAC 2441
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2442 TTTGTTGGCCCAGGCTGGTCTCAAACTCCTAAGCTCAAGTGATCTTCCCACCTTGGTCTCCCAAAGTGCTGGGA 2515
Query 361 ---------------------------------------- 360
Sbjct 2516 TTACAGGCATGAGCCACCACGCCTAGCCCCTGGTATTTTT 2555
