Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15832
- Subject:
- XM_006519504.3
- Aligned Length:
- 2196
- Identities:
- 1813
- Gaps:
- 54
Alignment
Query 1 ATGGAGGGCTCACGTCCCCGCGCCCCGAGCGGCCACTTAGCGCCGTCGCCGCCGGCTTTCGACGGCGAGCTGGA 74
|||||||||||||||||||||..||.|..|||||||.|||.|||.||.||.||.||.|||||||||||||||||
Sbjct 1 ATGGAGGGCTCACGTCCCCGCATCCTGGTCGGCCACCTAGAGCCTTCCCCACCAGCCTTCGACGGCGAGCTGGA 74
Query 75 TCTGCAGCGATACTCCAACGGGCCAGCCGTGAGCG------------CAGGGTCGCTCGGGATGGGAGCGGTGA 136
|||||||||.|||||||||||.||||..||.||.| |.||.||||..|||||||||||.|||.
Sbjct 75 TCTGCAGCGCTACTCCAACGGACCAGGTGTCAGTGGGACTCCAGGACCCGGCTCGCCTGGGATGGGAGCAGTGG 148
Query 137 GCTGGTCTGAGAGTCGTGCAGGCGAACGGCGCTTCCCCTGCCCTGTATGCGGGAAGCGCTTCCGCTTCAACTCT 210
|.||||||||||.||||||||||||||||||||||||.||.|||||.|||||.|||||||||||.|||||.||.
Sbjct 149 GTTGGTCTGAGACTCGTGCAGGCGAACGGCGCTTCCCTTGTCCTGTGTGCGGAAAGCGCTTCCGATTCAATTCC 222
Query 211 ATCCTTGCTTTGCACCTGCGGGCGCACCCAGGAGCCCAGGCCTTCCAGTGCCCTCACTGCGGCCACCGCGCGGC 284
|||.|.||||||||||||.|.||.|||||.||.|||||.||||||||||||||.||.||||||||||||||.||
Sbjct 223 ATCTTGGCTTTGCACCTGAGAGCCCACCCGGGCGCCCAAGCCTTCCAGTGCCCACATTGCGGCCACCGCGCAGC 296
Query 285 GCAGCGGGCTCTGCTGCGCTCGCACCTGCGCACACACCAGCCCGAGCGCCCACGTAGTCCTGCTGCACGCCTGT 358
|||||||||||||||||||||.|||||.||.||.||||||||.|||||.|||||.||.|||||||||||.||||
Sbjct 297 GCAGCGGGCTCTGCTGCGCTCACACCTCCGAACGCACCAGCCGGAGCGTCCACGCAGCCCTGCTGCACGGCTGT 370
Query 359 TGCTGGAGTTGGAAGAGCGCGCGCTACTACGCGAGGCCCGACTGGGGAGAGCCCGAAGCTCAGGGGGCATGCAG 432
|||||||||||||.||.|||||.||.||.|||||.||||||||.|||||||||.||||||||||.|||||||||
Sbjct 371 TGCTGGAGTTGGAGGAACGCGCCCTGCTTCGCGAAGCCCGACTCGGGAGAGCCAGAAGCTCAGGCGGCATGCAG 444
Query 433 GCCACCCCTGCCACTGAGGGTCTGGCGCGGCCCCAGGCTCCTTCATCGTCCGCCTTCCGTTGCCCCTACTGCAA 506
.|||.|||||||.|.|||||.|||||.||.||.||||..|||||.||.||.||||||||||||||.|.||||||
Sbjct 445 TCCAGCCCTGCCGCAGAGGGCCTGGCTCGCCCTCAGGTCCCTTCCTCATCTGCCTTCCGTTGCCCTTTCTGCAA 518
Query 507 AGGCAAGTTTCGCACCTCGGCGGAGCGCGAACGCCACCTGCACATCCTGCATAGGCCCTGGAAGTGCGGCCTGT 580
||||||||||||||||||.||||||||.||||||||||||||.||||||||.|||||||||||||||.||.|||
Sbjct 519 AGGCAAGTTTCGCACCTCAGCGGAGCGGGAACGCCACCTGCATATCCTGCACAGGCCCTGGAAGTGCAGCTTGT 592
Query 581 GCAGTTTCGGCTCCAGCCAGGAGGAGGAGCTGCTGCACCACAGCCTGACGGCCCACGGGGCTCCCGAGCGTCCC 654
|||||||.|||||||||||||||||||||.|||||||||||||.||||||||||||||||||.|||||||.|||
Sbjct 593 GCAGTTTTGGCTCCAGCCAGGAGGAGGAGTTGCTGCACCACAGTCTGACGGCCCACGGGGCTTCCGAGCGCCCC 666
Query 655 CTGGCGGCCACCTCCGCTGCGCCTCCGCCTCAGCCTCAGCCTCCACCCCAGCCCGAACCCAGATCAGTTCCCC- 727
||||||||.||.| ||.|||||.|.||.|.||||||||||||||..||||||||||| |.|||
Sbjct 667 CTGGCGGCTACAT---------CTACGCCTGAACCCCCGCCTCCACCCCAGCAAGAACCCAGATC---TGCCCT 728
Query 728 --AGCCGGAGCCGGA------------GCCGGAGCCCGAACGTGAGGCAACCCCGACCCCAGCTCCTGCCGCTC 787
||||.|||||.|| |||.|||||.||.||.|||||||.|||..|||||.|||||||..|||
Sbjct 729 TGAGCCTGAGCCTGAGCCTGAACCTAGGCCAGAGCCTGACCGGGAGGCAAACCCTGCCCCAACTCCTGCACCTC 802
Query 788 CCGAGGAGCCCCCAGCGCCTCCGGAGTTCCGCTGCCAAGTGTGCGGCCAGAGCTTTACACAGTCTTGGTTTCTC 861
|.|||||||||||.|||||.||.||.|||||.|||||.||||||||||||||||||||||||||.|||||||||
Sbjct 803 CGGAGGAGCCCCCTGCGCCACCTGAATTCCGTTGCCAGGTGTGCGGCCAGAGCTTTACACAGTCCTGGTTTCTC 876
Query 862 AAGGGCCACATGCGTAAGCACAAGGCCTCCTTCGATCATGCGTGTCCGGTGTGCGGCCGCTGCTTCAAGGAGCC 935
|||||.||||||||.|||||||||||||||||.|||||||||||.||.||.||.||.|||||||||||||||||
Sbjct 877 AAGGGTCACATGCGCAAGCACAAGGCCTCCTTTGATCATGCGTGCCCCGTATGTGGTCGCTGCTTCAAGGAGCC 950
Query 936 CTGGTTCCTTAAGAACCACATGAAGGTGCACGCCAGCAAGCTGGGCCCACTGCGTGCCCCGGGGCCTGCCTCCG 1009
|||||||||||||||||||||||||||||||.|||||||||||||.||..|||||||.||.||.||||.|||.|
Sbjct 951 CTGGTTCCTTAAGAACCACATGAAGGTGCACACCAGCAAGCTGGGTCCTTTGCGTGCTCCAGGCCCTGGCTCTG 1024
Query 1010 GGCCTGCCCGCGCCCCCCAGCCTCCTGACCTCGGCCTGCTGGCCTATGAGCCGTTGGGCCCAGCGCTCCTCTTG 1083
..||||||.|.|||||.||||||||.|||||..||||.|||||.||||||||..|||||||.||.||||||.||
Sbjct 1025 CACCTGCCAGGGCCCCTCAGCCTCCCGACCTGAGCCTACTGGCATATGAGCCACTGGGCCCTGCACTCCTCCTG 1098
Query 1084 GCCCCGGCTCCCACCCCGGCCGAGCGCCGTGAGCCCCCGAGCCTCTTGGGCTACCTGAGCCTGCGAGCTGGCGA 1157
|||||.||.|||.|.|||||.||||||||.||||||||.||||||||.|||||||||||..|.||||||||.||
Sbjct 1099 GCCCCAGCACCCGCTCCGGCTGAGCGCCGAGAGCCCCCAAGCCTCTTAGGCTACCTGAGTGTACGAGCTGGGGA 1172
Query 1158 GGGCCGGCCCAACGGCGAGGGTGCTGAGCCC----GGTCCCGGCCGCAGCTTCGGAGGCTTCCGCCCGCTGTCC 1227
.|..||.|||||.||.||||||||||| ||| ||| |||||.||||..|||||.||||||||.|||.|.
Sbjct 1173 AGTACGACCCAATGGTGAGGGTGCTGA-CCCTGGAGGT---GGCCGAAGCTATGGAGGGTTCCGCCCACTGCCT 1242
Query 1228 TCTGCTCTCCCGGCCCGGGCTCGCCGGCACCGTGCGGAGGAGCCTGAGGAAGAAGAGGAGGTGGTGGAGGCCGA 1301
||.|||||.||...|||||||||.||.||||||.|.|||||.||.||.||.|||||.||.|||||||||||.||
Sbjct 1243 TCAGCTCTTCCCAACCGGGCTCGGCGACACCGTACAGAGGAACCAGAAGAGGAAGAAGAAGTGGTGGAGGCTGA 1316
Query 1302 GGAGGAAACCTGGGCCCGGGGCAGGTCGCTGGGCTCTCTGGCTTCCCTGCACCCGCGCCCGGGTGAGGGACCGG 1375
.|||||.|.|||||||||.|||||||||||||||||||||.|||||||||||||...|||.||||||||..|.|
Sbjct 1317 AGAGGAGAGCTGGGCCCGAGGCAGGTCGCTGGGCTCTCTGACTTCCCTGCACCCCAACCCAGGTGAGGGGTCAG 1390
Query 1376 GGCACTCTGCCTCTGCTGCTGGGGCCCAGGCAAGATCGACCGCCACGCAGGAAGAGAATGGGCTGTTGGTTGGA 1449
|.||..||||..||||.||.|||.|||||||.|||||.||.|||||.||.|||||.||.||||||.||||||||
Sbjct 1391 GACAGCCTGCACCTGCCGCGGGGACCCAGGCGAGATCCACGGCCACCCAAGAAGAAAACGGGCTGCTGGTTGGA 1464
Query 1450 GGGACCCGGCCTGAAGGGGGCCGGGGCGCCACCGGCAAGGATTGTCCTTTCTGCGGAAAATCTTTCCGCTCAGC 1523
|||||.||..||||||.||||||.||.|||||.||||||||.||.||.|||||.|||||||||||||||||.||
Sbjct 1465 GGGACACGATCTGAAGCGGGCCGTGGGGCCACTGGCAAGGACTGCCCCTTCTGTGGAAAATCTTTCCGCTCGGC 1538
Query 1524 ACATCACCTCAAAGTGCATCTGCGAGTGCACACAGGCGAGCGGCCCTACAAGTGTCCGCACTGCGACTACGCGG 1597
.||||||.|.|||||||||||.||.|||||||||||.|||||.||||||||||||||.|||||||||||.||.|
Sbjct 1539 GCATCACTTAAAAGTGCATCTCCGTGTGCACACAGGTGAGCGTCCCTACAAGTGTCCACACTGCGACTATGCAG 1612
Query 1598 GCACCCAGTCCGGCTCGCTCAAGTATCACCTACAGCGCCACCACCGGGAGCAGAGGAGCGGGGCCGGCCCCGGG 1671
|.||||||||.||||||||||||||||||||.|||||.||||||||.||||||||||||.|.||.||.||.|||
Sbjct 1613 GTACCCAGTCGGGCTCGCTCAAGTATCACCTTCAGCGTCACCACCGAGAGCAGAGGAGCAGTGCGGGTCCTGGG 1686
Query 1672 CCACCCCCGGAGCCACCGCCTCCTTCCCAGCGGGGTTC---GGCCCCGCAATCTGGAGCCAAGCCGTCTCCGCA 1742
||.|||||.||.||.|||||.||||||||||||||.|| |...|||||.||.|||||||||||..|||.|
Sbjct 1687 CCTCCCCCAGAACCCCCGCCACCTTCCCAGCGGGGCTCACTGCAGCCGCAGTCAGGAGCCAAGCCAACTCAG-- 1758
Query 1743 GCCT--GCGACCTGGGTGGAGGGCGCCTCAAGTCCCCGGCCTCCTTCTAGCGGTGCTGGGCCGGGGTCCCGTCG 1814
|||| ||.||||||||.||||||.|..|||||.|||||||||||||.|||.|..|.||.||.|||||||||.|
Sbjct 1759 GCCTCAGCCACCTGGGTAGAGGGCACTGCAAGTACCCGGCCTCCTTCGAGCAGCACCGGACCAGGGTCCCGTAG 1832
Query 1815 GAAGCCCGCCAGCCCTGGGAGGACCCTGCGCAACGGGCGAGGCGGTGAGGCCGAACCCCTGGACCTGTCCTTGC 1888
||||||.||.||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||.|.|
Sbjct 1833 GAAGCCTGCTAGCCCTGGGAGGACCCTGCGAAACGGGCGAGGTGGTGAAGCCGAACCCCTGGACCTGTCCCTAC 1906
Query 1889 GGGCAGGGCCGGGAGGCGAGGCCGGGCCTGGGGGTGCCCTCCACCGCTGCCTCTTCTGCCCGTTCGCCACTGGA 1962
||||.||.||||||||.|||||||||.|.|||||||||||.||||||||||||||||||||.||.|||||||||
Sbjct 1907 GGGCGGGCCCGGGAGGTGAGGCCGGGGCAGGGGGTGCCCTTCACCGCTGCCTCTTCTGCCCCTTTGCCACTGGA 1980
Query 1963 GCCCCAGAGCTCATGGCCTTGCACCTTCAAGTGCACCACAGCCGCCGGGCTAGGGGCCGCCGGCCACCCCAGGC 2036
||.||.|||||||||||||||||.||.|||||.|||||.|||||.||.|||.||||||||||||..||||..||
Sbjct 1981 GCTCCTGAGCTCATGGCCTTGCATCTGCAAGTACACCATAGCCGTCGTGCTCGGGGCCGCCGGCAGCCCCGAGC 2054
Query 2037 TGACGCGTCCCCGCCCTATGCCCGAGTACCATCAGGAGAGACCCCTCCCAGTCCTTCGCAGGAAGGGGAGGAGG 2110
.|||.||||.||..||||||.|||.|.||||||||||||||||||||||||||||.|.|..||||.|||||...
Sbjct 2055 CGACACGTCTCCAACCTATGTCCGGGCACCATCAGGAGAGACCCCTCCCAGTCCTCCACTAGAAGAGGAGGGCA 2128
Query 2111 GCTCCGGGCTGTCCAGACCCGGAGAGGCAGGGCTGGGGGGGCAAGAACGG 2160
||.|.||||||||.|||.|||||||||||||.||.|||||||||||||||
Sbjct 2129 GCCCAGGGCTGTCTAGATCCGGAGAGGCAGGTCTTGGGGGGCAAGAACGG 2178