Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15858
- Subject:
- NR_045672.1
- Aligned Length:
- 5330
- Identities:
- 207
- Gaps:
- 5123
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAAAGTCATTGCCCTCCATGAACTAACAATCTACAGGGAGCTGTAAAACAAGTACATGTGCAATTCCCGGCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTTTGAATCCCAGCACTTCTAGCTGCACAACTTTACCCAAGAGGCTTATTCTTTCTGAGCCTCTGGCTCTGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTAAAATGGACTTTACATTCAGTTTCTTTATCTGGCAATAAGGTATTCTGCAGTGTGTGGGGAGCTGGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGATGAAGGGGACAGGATTCTAGATGAGCTACTCCACTCTGAAGACCCTATGACTGTATCCACTGGCAAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTTTGAATAAAGGCCCTTTTACTCTTTCATGCCAGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGACTACCTGAACACCCCTCTACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGACAAGGGGTCCCGGCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACTGCAATCTGTTGCCCAAGCTCCATGTGGTCAAGATTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAACGCCTATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCGCCAAACGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCAGCCGATCCTGAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCTTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCACTTTTTATAATCAAGCCTCATCTTGCTGGTATCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGAACTCCAGCCTGCTATCTTTCATGAAGGTCAGCACCATCCCTGGCCTCCTCACATAGGAATCTAGCAGAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGCCCACATATGGGATTGCCACTAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGATGCTTTAGAAACATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAACACCAACTCCTTTTCTACCCTCCTCTCCGTCCATACCTACAAGGCCAAGGACAAACGCCATCTTCATCCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTAGAAAGAGATCTATTACCCCATTAGGGGAGACAGAGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGGGTGTCTGGCAAACACAGCTTCAGTCTCACTACTTCTGACACTCTGGTTATTGGGCACTAAGGGCCAGACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGAAAGTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGCTGCTGCTGCGCACCTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCATGCTGTCCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGCATGCAATTCTAAACTGCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGACTGGGATGGGAGGGGAGGGGAGCAGTGTTGATGCCAAAATACCCACGGGGTCTACCAGCCATGGGGTTTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTGCTTAGGAGTAGTTGTTTCAGAGGTGATTACAGGCCTGGGTTTGACTGTGCTTACCAATGAGTGGTTTTTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCTATGAGAAAGTGGATGGGAGTGGGAGGAGGAGAGATGGGTGAAGACAAAAGAGTTCTTTATGAGCCTCGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTTCCCTGGTAAACTTTTAAAAAGGCCTTCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACCTTACAGTAAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGTTTCTCCAAGCTGCTTCTGGAATGCAGGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATGGGTAAAAGCCACATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TAGGAGGTGGTCTGATCATAGAACACCTTAGGAAGAAAGTCCATGAGACTTTCTGACTAGGAAACCATGTGGTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGAACTTGAAGAAAAATGTAGACCCATCTGGGTTAATTTTCCTACAATCTGACTCAACTGCCAGGTGAAAAAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAAGGAAAAATTTTTAAGCTAATATTTCACTCTTTTGTCATTCTCCTTAAGTTTCATCTCCTAAAAAGCTTACC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGCCTGAGCTTGGGGACCTGTGCAGAGGAAACTAAGAAAAATGCACTCATCAACTCCTTCTCCCAGTGAACGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCGGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGAGGCTCCCAAGTGCTGGAAAGCCCCTGGACTTGGCTCATTTCTCAGCAAGGGCAGGATAGCACGGGTCCTTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCATAGAAATATCAACAAATTCTAACCCAAGCAATCCCTGGACCTACCTGCCTCCAGGGATCTCTGAAGAAAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGTAACCCATTGATCAAATCAGAGGAGAGGAAGCAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAACTTTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCAGTAGGACACTTTATAAGCCTGAGAAAGCTTTGAAAAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACCTTTCCAGGTCCCCCTGGAAATTGTGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGGAAAGAGTCCTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTTTACTGTAGGGAAAAGCCCCAAACTGGCCTCCTGGGGGATGAGGGCTGAAATGATCCCGAAGGCCTTTTAAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTACTTCCCTGAGACCCACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGATGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCAGAATTCAGCAACTGGAAAGTCCTTAAAAACAAACAGGCCAAACCAAATCAATATTGCTGTTTCTAGATGTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCTTCTGTGGTTGAGCTAGTTTTACAGAGATAAATATATTAAGACAAGGAGGTGGGGGTGTTATATGATCAATG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATAGCCATTTGAAAGAGAGGGAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAATTCAGAAATTTCTTTATA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTTCAGCACTGGATTATCATATAATGCAAGTGACTATGGACTAAGAGTTAGTTATGGTGTCTTATGACTAGATT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TATTATGGTATATTAAAGTAACAATAATATTAATATTACCTTCCTTTTTTTTTTTGTTTCAAAAGAGATCTTTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCCTTAGGTGTCCCAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAACTATACAGCTAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGGGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GGGGATGTATTTGTGTTGAGATCTTATTTTATTTTGTATTTATTTATCTTCTTTGACTTGCACAGCACTATTGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GGGTGGGGGAAGCAGGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CTGTCTAGTCAGCAATGCCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGAGTAAGATTTTAATAACTGTAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAAGTAAGCTGGATAAGTAAAATCATGATGGATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAAAGTCAAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGCTTGATAAATTCAGAGTCACAGATGTGAGCATAGCTATATTCTTTTAAACGAGAGGTAGAGTGACCTAGCAC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TAAGCAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGATCCCAAACTAGTTTTAT 3922
Query 1 --------ATGGCCCTGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAA 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 CTTGGGAAATGGCCCTGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAA 3996
Query 67 AAAGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTT 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 AAAGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTT 4070
Query 141 CACAGTTCTGTGCCCCATGGCCACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGA------- 207
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 CACAGTTCTGTGCCCCATGGCCACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGATAGGTCA 4144
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4145 TGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAG 4218
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4219 GCAGAGGCAGGAAGCTGCGGGTCTATCTTGTAAAGAGTTTAGCATCACTGTGAGAGTGTGTGTCTAAAATTAAA 4292
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4293 TTAAACTAGAAGCAGCAGGTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCC 4366
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4367 ATCTCAACTGCACGGTGAATCAAGATGCTGGTGTCATCCTCCTTGGAAAAAGGAAATGTTAACTCATGGTTAAA 4440
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4441 ACTAAGTACAATGATTCCCAAGGGATCACTTTCTTATTTTTTTAAATGACATTAAGGAGAATCTTAAGAAAGCA 4514
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4515 TCAGAGAAAGACATGTGCATGTGAAGCACCCTGATTCTGATGTTAGGAAAACTTAAGCGAACAGGACCTGCTGC 4588
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4589 ACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATCATTCAAATCAAGCAACATGTGCCCTCCTCATCAACAC 4662
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4663 ACATTCTTCCCCTTTGTCAGTATGCATCTCCCAGCTTAGTGTCAGGATACTTTCGATTCATAATTATGTATGAT 4736
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4737 CCAAAGTGTGCATAATTTCATTTAACGTTAAAGAAATAGATCCAATTCCTTTCTTGCAACCAAAAATAAATAAA 4810
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4811 ATACGTTGCCTCAATATAAGGTTTGGGCTATTCTGTGTTTCTATAGAAGCAATCTGTTTTTGGTAAAATGTACT 4884
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4885 TTTAAGGATCCAGTCATCTGAAGTATTTTATGTAGAGTTAGAGATTTCACAATATTGACTATACATATATTTAA 4958
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4959 AATATAAATTATCCAGCTGATGTTTGAATTTGTCTTACTTTCCTGGCCACCTCGTTGTCCTATTTTATAAGCTG 5032
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5033 GGGAGTTAACTAGCTTAACAAAAGATGCTTAGCTTTTGTAAAAGAACAAGTGTTTCATTTTACAAAGACACTCC 5106
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5107 AAATGATAGTTACTTGATTTTCTCGAGACCTTTAACTATGGTGATGAATAACAGGACTTGCTTTCAAGCCTTAA 5180
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5181 TAAATGTAAAATGCCTTTTAATGAAGATACAGCTGAGTGTTTTCCTCATGAATCTGAACCAATTACCAATTTGT 5254
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5255 GTTCCAGTCTTGATTGGTATTGACTGATTCAAATAAAGTTGGTTTATTTTCAAATATTACAAAAAAAAAAAAAA 5328
Query 208 -- 207
Sbjct 5329 AA 5330
