Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15879
- Subject:
- XR_002957558.1
- Aligned Length:
- 1922
- Identities:
- 892
- Gaps:
- 1030
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGATGCACCGCGCCAGCCCCGACCGACGGACGAGACTGACCCGGACTTAGGCGTTCCGCCTGGCCCGGCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAAAAAAGGCAGTTTTGAAGCATTTAGTGGCAAAAGGGGTAGGAGACGGCTGCTGAAGTGTCTACTACATTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGGGACCTGGAAGGCTTCCAGATATCCGCAATGAACAATGAAAAGAAATTGTGAAAGAAGGCGCTTCCCTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGAACTAATGAACTCCTGGGTCACGTGGTGCGCACGCGCCAAAGGCACACGATAAAGGAAAACGCGGGCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCGTGGCCTTTAAAATCCGGCTTGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTTACGGGGCCTGGCGGTGCTGACGCCTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAAAAAAAAAAGTGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACAAAATATTACTCCGAATGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAGGTAGAAAAAACACAAATGAATTCTATAAGACCATTCCCCGGTTTTATTATAGGCTGCCTGCTGAAGATGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTCTTACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGATA 740
Query 1 -----------------------------------------------------ATGATTGGAGAGGAAGCGATG 21
|||||||||||||||||||||
Sbjct 741 ATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATG 814
Query 22 ATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGT 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGT 888
Query 96 CTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGAA 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGAA 962
Query 170 AAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATCT 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATCT 1036
Query 244 GATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACTC 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACTC 1110
Query 318 CTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATTC 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATTC 1184
Query 392 AAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAA 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAA 1258
Query 466 GAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATAAAGATCACAA 539
||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTT---------------------------------- 1298
Query 540 TGGCATGCTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCTACCATGACCAATGTCTTCTTAGACCGTGTTT 613
Sbjct 1299 -------------------------------------------------------------------------- 1298
Query 614 TCCAGGAGTGTCTCACTTATGATGGAGAAATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAAC 687
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 -----------------------------ATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAAC 1343
Query 688 AGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCTT 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344 AGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCTT 1417
Query 762 TTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAAG 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 TTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAAG 1491
Query 836 ATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAAC 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 ATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAAC 1565
Query 910 AGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGC 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1566 AGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGC 1639
Query 984 TCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACA---------------------------- 1029
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1640 TCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTAT 1713
Query 1030 ------------------------------------------------------------------------ 1029
Sbjct 1714 ATTATGAGATACTTGAATGCTGCATGTAAAGCCTTTAAAGCAAAATCCTCAGAAATGGTCTAAATAAAACAC 1785
