Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15890
Subject:
NM_139118.2
Aligned Length:
2448
Identities:
1992
Gaps:
456

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGGAGGAGGCGAGCCGCAGCGCCGCGGCGACGAACCCAGGGAGTCGGCTTACCCGCTGGCCGCCTCCTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAGCGGGAGGGATCCGCGGTGGACCCAGGGAAGCGGAGGAGCCTGGCGGCCACCCCCTCTTCCTCACTTCCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTACTCTCATCGCTCTCGGCCTCCGACACGAAAAGGAAGCAAATGAGCTGATGGAAGATCTGTTTGAAACTTTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAAGATGAGATGGGATTCTCCAACATGGAAGATGATGGCCCAGAAGAGGAGGAGCGTGTGGCTGAGCCTCAAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TAACTTTAACACCCCTCAAGCTCTACGGTTTGAGGAACTACTGGCCAACCTACTAAATGAACAACATCAGATAG  370

Query    1  --------------------------ATGAAGAAACCTTCAGCCAAACAGCAGAAGGAGGTAGAGAAGGTTAAA  48
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CGAAGGAACTATTTGAACAGCTGAAGATGAAGAAACCTTCAGCCAAACAGCAGAAGGAGGTAGAGAAGGTTAAA  444

Query   49  CCCCAGTGTAAGGAAGTTCATCAGACCCTGATTCTGGACCCAGCACAAAGGAAGAGACTCCAGCAGCAGATGCA  122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCCAGTGTAAGGAAGTTCATCAGACCCTGATTCTGGACCCAGCACAAAGGAAGAGACTCCAGCAGCAGATGCA  518

Query  123  GCAGCATGTTCAGCTCTTGACACAAATCCACCTTCTTGCCACCTGCAACCCCAATCTCAATCCGGAGGCCAGTA  196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCAGCATGTTCAGCTCTTGACACAAATCCACCTTCTTGCCACCTGCAACCCCAATCTCAATCCGGAGGCCAGTA  592

Query  197  GCACCAGGATATGTCTTAAAGAGCTGGGAACCTTTGCTCAAAGCTCCATCGCCCTTCACCATCAGTACAACCCC  270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCACCAGGATATGTCTTAAAGAGCTGGGAACCTTTGCTCAAAGCTCCATCGCCCTTCACCATCAGTACAACCCC  666

Query  271  AAGTTTCAGACCCTGTTCCAACCCTGTAACTTGATGGGAGCTATGCAGCTGATTGAAGACTTCAGCACACATGT  344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGTTTCAGACCCTGTTCCAACCCTGTAACTTGATGGGAGCTATGCAGCTGATTGAAGACTTCAGCACACATGT  740

Query  345  CAGCATTGACTGCAGCCCTCATAAAACTGTCAAGAAGACTGCCAATGAATTTCCCTGTTTGCCAAAGCAAGTGG  418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGCATTGACTGCAGCCCTCATAAAACTGTCAAGAAGACTGCCAATGAATTTCCCTGTTTGCCAAAGCAAGTGG  814

Query  419  CTTGGATCCTGGCCACAAGCAAGGTTTTCATGTATCCAGAGTTACTTCCAGTGTGTTCCCTGAAGGCAAAGAAT  492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTTGGATCCTGGCCACAAGCAAGGTTTTCATGTATCCAGAGTTACTTCCAGTGTGTTCCCTGAAGGCAAAGAAT  888

Query  493  CCCCAGGATAAGATCCTCTTCACCAAGGCTGAGGACAATTTGTTAGCTTTAGGACTGAAGCATTTTGAAGGGAC  566
            ||||||||||||||||||||||||||||||||||||||                                    
Sbjct  889  CCCCAGGATAAGATCCTCTTCACCAAGGCTGAGGACAA------------------------------------  926

Query  567  TGAGTTTCTTAACCCTCTAATCAGCAAGTACCTTCTAACCTGCAAGACTGCCCGCCAACTGACAGTGAGAATCA  640
                                    ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  927  ------------------------CAAGTACCTTCTAACCTGCAAGACTGCCCGCCAACTGACAGTGAGAATCA  976

Query  641  AGAACCTCAACATGAACAGAGCTCCTGACAACATCATTAAATTTTATAAGAAGACCAAACAGCTGCCAGTCCTA  714
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  977  AGAACCTCAACATGAACAGAGCTCCTGACAACATCATTAAATTTTATAAGAAGACCAAACAGCTGCCAGTCCTA  1050

Query  715  GGAAAATGCTGTGAAGAGATCCAGCCACATCAGTGGAAGCCACCTATAGAGAGAGAAGAACACCGGCTCCCATT  788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1051  GGAAAATGCTGTGAAGAGATCCAGCCACATCAGTGGAAGCCACCTATAGAGAGAGAAGAACACCGGCTCCCATT  1124

Query  789  CTGGTTAAAGGCCAGTCTGCCATCCATCCAGGAAGAACTGCGGCACATGGCTGATGGTGCTAGAGAGGTAGGAA  862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125  CTGGTTAAAGGCCAGTCTGCCATCCATCCAGGAAGAACTGCGGCACATGGCTGATGGTGCTAGAGAGGTAGGAA  1198

Query  863  ATATGACTGGAACCACTGAGATCAACTCAGATCAAGGCCTAGAAAAAGACAACTCAGAGTTGGGGAGTGAAACT  936
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199  ATATGACTGGAACCACTGAGATCAACTCAGATCAAGGCCTAGAAAAAGACAACTCAGAGTTGGGGAGTGAAACT  1272

Query  937  CGGTACCCACTGCTATTGCCTAAGGGTGTAGTCCTGAAACTGAAGCCAGTTGCCGACCGTTTCCCCAAGAAGGC  1010
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1273  CGGTACCCACTGCTATTGCCTAAGGGTGTAGTCCTGAAACTGAAGCCAGTTGCCGACCGTTTCCCCAAGAAGGC  1346

Query 1011  TTGGAGACAGAAGCGTTCATCAGTCCTGAAACCCCTCCTTATCCAACCCAGCCCCTCTCTCCAGCCCAGCTTCA  1084
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1347  TTGGAGACAGAAGCGTTCATCAGTCCTGAAACCCCTCCTTATCCAACCCAGCCCCTCTCTCCAGCCCAGCTTCA  1420

Query 1085  ACCCTGGGAAAACACCAGCCCAATCAACTCATTCAGAAGCCCCTCCGAGCAAAATGGTGCTCCGGATTCCTCAC  1158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1421  ACCCTGGGAAAACACCAGCCCAATCAACTCATTCAGAAGCCCCTCCGAGCAAAATGGTGCTCCGGATTCCTCAC  1494

Query 1159  CCAATACAGCCAGCCACTGTTTTACAGACAGTTCCAGGTGTCCCTCCACTGGGGGTCAGTGGAGGTGAGAGTTT  1232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495  CCAATACAGCCAGCCACTGTTTTACAGACAGTTCCAGGTGTCCCTCCACTGGGGGTCAGTGGAGGTGAGAGTTT  1568

Query 1233  TGAGTCTCCTGCAGCACTGCCTGCTATGCCCCCTGAGGCCAGGACAAGCTTCCCTCTGTCTGAGTCCCAGACTT  1306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1569  TGAGTCTCCTGCAGCACTGCCTGCTATGCCCCCTGAGGCCAGGACAAGCTTCCCTCTGTCTGAGTCCCAGACTT  1642

Query 1307  TGCTCTCTTCTGCCCCTGTGCCCAAGGTAATGATGCCCTCCCCTGCCTCTTCCATGTTTCGAAAGCCATATGTG  1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1643  TGCTCTCTTCTGCCCCTGTGCCCAAGGTAATGATGCCCTCCCCTGCCTCTTCCATGTTTCGAAAGCCATATGTG  1716

Query 1381  AGACGGAGACCCTCAAAAAGAAGGGGAGCCAGGGCCTTTCGCTGTATCAAACCTGCCCCTGTTATCCACCCTGC  1454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1717  AGACGGAGACCCTCAAAAAGAAGGGGAGCCAGGGCCTTTCGCTGTATCAAACCTGCCCCTGTTATCCACCCTGC  1790

Query 1455  ATCTGTTATCTTCACTGTTCCTGCTACCACTGTGAAGATTGTGAGCCTTGGCGGTGGCTGTAACATGATCCAGC  1528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791  ATCTGTTATCTTCACTGTTCCTGCTACCACTGTGAAGATTGTGAGCCTTGGCGGTGGCTGTAACATGATCCAGC  1864

Query 1529  CTGTCAATGCGGCTGTGGCCCAGAGTCCCCAGACTATTCCCATCGCCACCCTCTTGGTTAACCCTACTTCCTTC  1602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1865  CTGTCAATGCGGCTGTGGCCCAGAGTCCCCAGACTATTCCCATCGCCACCCTCTTGGTTAACCCTACTTCCTTC  1938

Query 1603  CCCTGTCCATTGAACCAGCCCCTTGTGGCCTCCTCTGTCTCACCCTTAATTGTTTCTGGCAATTCTGTGAATCT  1676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1939  CCCTGTCCATTGAACCAGCCCCTTGTGGCCTCCTCTGTCTCACCCTTAATTGTTTCTGGCAATTCTGTGAATCT  2012

Query 1677  TCCTATACCATCCACCCCTGAAGATAAGGCCCACATGAATGTGGACATTGCTTGTGCTGTGGCTGATGGGGAAA  1750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2013  TCCTATACCATCCACCCCTGAAGATAAGGCCCACATGAATGTGGACATTGCTTGTGCTGTGGCTGATGGGGAAA  2086

Query 1751  ATGCCTTTCAGGGCCTAGAACCCAAATTAGAGCCCCAGGAACTATCTCCTCTCTCTGCTACTGTTTTCCCCAAA  1824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2087  ATGCCTTTCAGGGCCTAGAACCCAAATTAGAGCCCCAGGAACTATCTCCTCTCTCTGCTACTGTTTTCCCCAAA  2160

Query 1825  GTGGAACATAGCCCAGGGCCTCCACCAGTCGATAAACAGTGCCAAGAAGGATTGTCAGAGAACAGTGCCTATCG  1898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2161  GTGGAACATAGCCCAGGGCCTCCACCAGTCGATAAACAGTGCCAAGAAGGATTGTCAGAGAACAGTGCCTATCG  2234

Query 1899  CTGGACCGTTGTGAAAACAGAGGAGGGAAGGCAAGCTCTGGAGCCGCTCCCTCAGGGCATCCAGGAGTCTCTAA  1972
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2235  CTGGACCGTTGTGAAAACAGAGGAGGGAAGGCAAGCTCTGGAGCCGCTCCCTCAGGGCATCCAGGAGTCTCTAA  2308

Query 1973  ACAACTCTTCCCCTGGGGATTTAGAGGAAGTTGTCAAGATGGAACCTGAAGATGCTACAGAGGAAATCAGTGGA  2046
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2309  ACAACTCTTCCCCTGGGGATTTAGAGGAAGTTGTCAAGATGGAACCTGAAGATGCTACAGAGGAAATCAGTGGA  2382

Query 2047  TTTCTT  2052
            ||||||
Sbjct 2383  TTTCTT  2388

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