Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15890
Subject:
NM_139119.2
Aligned Length:
2250
Identities:
2052
Gaps:
198

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAAGATCTGTTTGAAACTTTCCAAGATGAGATGGGATTCTCCAACATGGAAGATGATGGCCCAGAAGAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGCGTGTGGCTGAGCCTCAAGCTAACTTTAACACCCCTCAAGCTCTACGGTTTGAGGAACTACTGGCCAACC  148

Query    1  --------------------------------------------------ATGAAGAAACCTTCAGCCAAACAG  24
                                                              ||||||||||||||||||||||||
Sbjct  149  TACTAAATGAACAACATCAGATAGCGAAGGAACTATTTGAACAGCTGAAGATGAAGAAACCTTCAGCCAAACAG  222

Query   25  CAGAAGGAGGTAGAGAAGGTTAAACCCCAGTGTAAGGAAGTTCATCAGACCCTGATTCTGGACCCAGCACAAAG  98
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGAAGGAGGTAGAGAAGGTTAAACCCCAGTGTAAGGAAGTTCATCAGACCCTGATTCTGGACCCAGCACAAAG  296

Query   99  GAAGAGACTCCAGCAGCAGATGCAGCAGCATGTTCAGCTCTTGACACAAATCCACCTTCTTGCCACCTGCAACC  172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAGAGACTCCAGCAGCAGATGCAGCAGCATGTTCAGCTCTTGACACAAATCCACCTTCTTGCCACCTGCAACC  370

Query  173  CCAATCTCAATCCGGAGGCCAGTAGCACCAGGATATGTCTTAAAGAGCTGGGAACCTTTGCTCAAAGCTCCATC  246
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCAATCTCAATCCGGAGGCCAGTAGCACCAGGATATGTCTTAAAGAGCTGGGAACCTTTGCTCAAAGCTCCATC  444

Query  247  GCCCTTCACCATCAGTACAACCCCAAGTTTCAGACCCTGTTCCAACCCTGTAACTTGATGGGAGCTATGCAGCT  320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCCCTTCACCATCAGTACAACCCCAAGTTTCAGACCCTGTTCCAACCCTGTAACTTGATGGGAGCTATGCAGCT  518

Query  321  GATTGAAGACTTCAGCACACATGTCAGCATTGACTGCAGCCCTCATAAAACTGTCAAGAAGACTGCCAATGAAT  394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GATTGAAGACTTCAGCACACATGTCAGCATTGACTGCAGCCCTCATAAAACTGTCAAGAAGACTGCCAATGAAT  592

Query  395  TTCCCTGTTTGCCAAAGCAAGTGGCTTGGATCCTGGCCACAAGCAAGGTTTTCATGTATCCAGAGTTACTTCCA  468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCCCTGTTTGCCAAAGCAAGTGGCTTGGATCCTGGCCACAAGCAAGGTTTTCATGTATCCAGAGTTACTTCCA  666

Query  469  GTGTGTTCCCTGAAGGCAAAGAATCCCCAGGATAAGATCCTCTTCACCAAGGCTGAGGACAATTTGTTAGCTTT  542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTGTGTTCCCTGAAGGCAAAGAATCCCCAGGATAAGATCCTCTTCACCAAGGCTGAGGACAATTTGTTAGCTTT  740

Query  543  AGGACTGAAGCATTTTGAAGGGACTGAGTTTCTTAACCCTCTAATCAGCAAGTACCTTCTAACCTGCAAGACTG  616
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGACTGAAGCATTTTGAAGGGACTGAGTTTCTTAACCCTCTAATCAGCAAGTACCTTCTAACCTGCAAGACTG  814

Query  617  CCCGCCAACTGACAGTGAGAATCAAGAACCTCAACATGAACAGAGCTCCTGACAACATCATTAAATTTTATAAG  690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCCGCCAACTGACAGTGAGAATCAAGAACCTCAACATGAACAGAGCTCCTGACAACATCATTAAATTTTATAAG  888

Query  691  AAGACCAAACAGCTGCCAGTCCTAGGAAAATGCTGTGAAGAGATCCAGCCACATCAGTGGAAGCCACCTATAGA  764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGACCAAACAGCTGCCAGTCCTAGGAAAATGCTGTGAAGAGATCCAGCCACATCAGTGGAAGCCACCTATAGA  962

Query  765  GAGAGAAGAACACCGGCTCCCATTCTGGTTAAAGGCCAGTCTGCCATCCATCCAGGAAGAACTGCGGCACATGG  838
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAGAGAAGAACACCGGCTCCCATTCTGGTTAAAGGCCAGTCTGCCATCCATCCAGGAAGAACTGCGGCACATGG  1036

Query  839  CTGATGGTGCTAGAGAGGTAGGAAATATGACTGGAACCACTGAGATCAACTCAGATCAAGGCCTAGAAAAAGAC  912
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTGATGGTGCTAGAGAGGTAGGAAATATGACTGGAACCACTGAGATCAACTCAGATCAAGGCCTAGAAAAAGAC  1110

Query  913  AACTCAGAGTTGGGGAGTGAAACTCGGTACCCACTGCTATTGCCTAAGGGTGTAGTCCTGAAACTGAAGCCAGT  986
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AACTCAGAGTTGGGGAGTGAAACTCGGTACCCACTGCTATTGCCTAAGGGTGTAGTCCTGAAACTGAAGCCAGT  1184

Query  987  TGCCGACCGTTTCCCCAAGAAGGCTTGGAGACAGAAGCGTTCATCAGTCCTGAAACCCCTCCTTATCCAACCCA  1060
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGCCGACCGTTTCCCCAAGAAGGCTTGGAGACAGAAGCGTTCATCAGTCCTGAAACCCCTCCTTATCCAACCCA  1258

Query 1061  GCCCCTCTCTCCAGCCCAGCTTCAACCCTGGGAAAACACCAGCCCAATCAACTCATTCAGAAGCCCCTCCGAGC  1134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCCCCTCTCTCCAGCCCAGCTTCAACCCTGGGAAAACACCAGCCCAATCAACTCATTCAGAAGCCCCTCCGAGC  1332

Query 1135  AAAATGGTGCTCCGGATTCCTCACCCAATACAGCCAGCCACTGTTTTACAGACAGTTCCAGGTGTCCCTCCACT  1208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AAAATGGTGCTCCGGATTCCTCACCCAATACAGCCAGCCACTGTTTTACAGACAGTTCCAGGTGTCCCTCCACT  1406

Query 1209  GGGGGTCAGTGGAGGTGAGAGTTTTGAGTCTCCTGCAGCACTGCCTGCTATGCCCCCTGAGGCCAGGACAAGCT  1282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGGGGTCAGTGGAGGTGAGAGTTTTGAGTCTCCTGCAGCACTGCCTGCTATGCCCCCTGAGGCCAGGACAAGCT  1480

Query 1283  TCCCTCTGTCTGAGTCCCAGACTTTGCTCTCTTCTGCCCCTGTGCCCAAGGTAATGATGCCCTCCCCTGCCTCT  1356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCCCTCTGTCTGAGTCCCAGACTTTGCTCTCTTCTGCCCCTGTGCCCAAGGTAATGATGCCCTCCCCTGCCTCT  1554

Query 1357  TCCATGTTTCGAAAGCCATATGTGAGACGGAGACCCTCAAAAAGAAGGGGAGCCAGGGCCTTTCGCTGTATCAA  1430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCCATGTTTCGAAAGCCATATGTGAGACGGAGACCCTCAAAAAGAAGGGGAGCCAGGGCCTTTCGCTGTATCAA  1628

Query 1431  ACCTGCCCCTGTTATCCACCCTGCATCTGTTATCTTCACTGTTCCTGCTACCACTGTGAAGATTGTGAGCCTTG  1504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  ACCTGCCCCTGTTATCCACCCTGCATCTGTTATCTTCACTGTTCCTGCTACCACTGTGAAGATTGTGAGCCTTG  1702

Query 1505  GCGGTGGCTGTAACATGATCCAGCCTGTCAATGCGGCTGTGGCCCAGAGTCCCCAGACTATTCCCATCGCCACC  1578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GCGGTGGCTGTAACATGATCCAGCCTGTCAATGCGGCTGTGGCCCAGAGTCCCCAGACTATTCCCATCGCCACC  1776

Query 1579  CTCTTGGTTAACCCTACTTCCTTCCCCTGTCCATTGAACCAGCCCCTTGTGGCCTCCTCTGTCTCACCCTTAAT  1652
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CTCTTGGTTAACCCTACTTCCTTCCCCTGTCCATTGAACCAGCCCCTTGTGGCCTCCTCTGTCTCACCCTTAAT  1850

Query 1653  TGTTTCTGGCAATTCTGTGAATCTTCCTATACCATCCACCCCTGAAGATAAGGCCCACATGAATGTGGACATTG  1726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TGTTTCTGGCAATTCTGTGAATCTTCCTATACCATCCACCCCTGAAGATAAGGCCCACATGAATGTGGACATTG  1924

Query 1727  CTTGTGCTGTGGCTGATGGGGAAAATGCCTTTCAGGGCCTAGAACCCAAATTAGAGCCCCAGGAACTATCTCCT  1800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CTTGTGCTGTGGCTGATGGGGAAAATGCCTTTCAGGGCCTAGAACCCAAATTAGAGCCCCAGGAACTATCTCCT  1998

Query 1801  CTCTCTGCTACTGTTTTCCCCAAAGTGGAACATAGCCCAGGGCCTCCACCAGTCGATAAACAGTGCCAAGAAGG  1874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CTCTCTGCTACTGTTTTCCCCAAAGTGGAACATAGCCCAGGGCCTCCACCAGTCGATAAACAGTGCCAAGAAGG  2072

Query 1875  ATTGTCAGAGAACAGTGCCTATCGCTGGACCGTTGTGAAAACAGAGGAGGGAAGGCAAGCTCTGGAGCCGCTCC  1948
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  ATTGTCAGAGAACAGTGCCTATCGCTGGACCGTTGTGAAAACAGAGGAGGGAAGGCAAGCTCTGGAGCCGCTCC  2146

Query 1949  CTCAGGGCATCCAGGAGTCTCTAAACAACTCTTCCCCTGGGGATTTAGAGGAAGTTGTCAAGATGGAACCTGAA  2022
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CTCAGGGCATCCAGGAGTCTCTAAACAACTCTTCCCCTGGGGATTTAGAGGAAGTTGTCAAGATGGAACCTGAA  2220

Query 2023  GATGCTACAGAGGAAATCAGTGGATTTCTT  2052
            ||||||||||||||||||||||||||||||
Sbjct 2221  GATGCTACAGAGGAAATCAGTGGATTTCTT  2250

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