Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NM_001352359.2
- Aligned Length:
- 2358
- Identities:
- 603
- Gaps:
- 1755
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGATAGACTGGGAGAAGATGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAATCCACTACTTGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTTCTTAAAGAAGAAGCATGATTTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCTCAGGCTCCTGACGTGTATCGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATTATCCAGAGGCTTGTGGAAATAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTGTGAAATTGTTCGCCTGAGCAGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCACTCTAGAAAAGCAAGAAATTATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATAGTCAGTGCAATCCAGATATTGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGCCCACCAGGCATGAGCCATTCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGATCTTTTCATGAACTCCTGCTGGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCTGTGGGGAATACCCGGTTGAATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGGGGACCTTATGGAGCTGAATAGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGCATACACAAGTGGAAATTTGTATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TACCGATCAAGACTCCACTGGTGATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACTTGAAGCCTGGGAAATGAATGAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGAGGATAGCTAACTGTATCGTGCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGATCTTCCCGACGAAGTCAGGGAACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACACGGTAGATCTAGTTACAACCTGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGAAACGGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCTCACAGGATTCTTCTTTGCAGCAAATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGAGAAGTTTGCAGATCAAGATGACATTGGCAATGTTTCTTTTGATCGAGTATCAGACATCAACTTTACTCTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATACAAATGAAAGTGGAAATATTGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATACAACAGTTTGATGATGGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCTCTGATGAGGAAGATATATGGGAGGAAAAGCACATCGCATTCACACCAGAATCCCAAAGACGATCCAGCTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGGAGTACAGACAGTGAGGAAAGTACAGACTCTGAAGAAGAAGATGGAGCAAAGCAAGACTTGTTTGAACCCA 1702
Query 1 -----------------------ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GCAGTGCCAACACGGAGGATAAAATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTC 1776
Query 52 CCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCC 1850
Query 126 AACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTA 1924
Query 200 ATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTG 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTG 1998
Query 274 CAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAA 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAA 2072
Query 348 GGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTG 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTG 2146
Query 422 CGGTCTTCAAAAGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CGGTCTTCAAAAGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCC 2220
Query 496 GAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAG----------------- 552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGTGCCTCCGATGCCTG 2294
Query 553 -------------AGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCTGTTGCTCCTTAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 2358
