Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NM_001352370.2
- Aligned Length:
- 2364
- Identities:
- 603
- Gaps:
- 1761
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGATAGACTGGGAGAAGATGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAATCCACTACTTGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTTCTTAAAGAAGAAGCATGATTTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCTCAGGCTCCTGACGTGTATCGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATTATCCAGAGGCTTGTGGAAATAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTGTGAAATTGTTCGCCTGAGCAGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCACTCTAGAAAAGCAAGAAATTATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATAGTCAGTGCAATCCAGATATTGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGCCCACCAGGCATGAGCCATTCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGATCTTTTCATGAACTCCTGCTGGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCTGTGGGGAATACCCGGTTGAATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGGGGACCTTATGGAGCTGAATAGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGCATACACAAGTGGAAATTTGTATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TACCGATCAAGACTCCACTGGTGATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACTTGAAGCCTGGGAAATGAATGAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGAGGATAGCTAACTGTATCGTGCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGATCTTCCCGACGAAGTCAGGGAACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACACGGTAGATCTAGTTACAACCTGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGAAACGGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCTCACAGGATTCTTCTTTGCAGCAAGCCTTTTCTGATTATCAGATGCAACAAATGACGTCCAATTTTATTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGTTTGGCTTCAACGATGAGAAGTTTGCAGATCAAGATGACATTGGCAATGTTTCTTTTGATCGAGTATCAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACATCAACTTTACTCTCAATACAAATGAAAGTGGAAATATTGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAACAGTTTGATGATGGTGGCTCTGATGAGGAAGATATATGGGAGGAAAAGCACATCGCATTCACACCAGAATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCAAAGACGATCCAGCTCGGGGAGTACAGACAGTGAGGAAAGTACAGACTCTGAAGAAGAAGATGGAGCAAAGC 1702
Query 1 -----------------------------------------ATGGAGGTGGACCTGAGTGAACCACCCAACTGG 33
|||||||||||||||||||||||||||||||||
Sbjct 1703 AAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGGATAAAATGGAGGTGGACCTGAGTGAACCACCCAACTGG 1776
Query 34 TCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAG 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAG 1850
Query 108 CACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAA 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAA 1924
Query 182 AAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGT 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGT 1998
Query 256 GCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGA 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGA 2072
Query 330 TGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAG 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAG 2146
Query 404 ATGCCAAGACAGAGACTGCGGTCTTCAAAA------------------GTGAGGAAGGGAAACTGTCTACCTCT 459
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2147 ATGCCAAGACAGAGACTGCGGTCTTCAAAAGAGTGTTGAAATCCTATCGTGAGGAAGGGAAACTGTCTACCTCT 2220
Query 460 CAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCC 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCC 2294
Query 534 CAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 2364
