Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NM_001352373.2
- Aligned Length:
- 2580
- Identities:
- 603
- Gaps:
- 1977
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACACTTCTAGAAAGAGAAGATGTAACACTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGTTAATGGATGAGGAAGATGTTTTACAGGAATGTAAAGCTCAGAACCGCAAACTTATAGAGTTTCTGTTAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCAGAATGTCTCGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGACATGGATGAAAAGATCAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACAAGTATCCAAATATATCTTGTGAGTTGCTCACTTCTGATGTCTCCCAGATGAATGATAGACTGGGAGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTAAAGAAGAAGCATGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTGTTGCTCAGGCTCCTGACGTGTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAAAATTATCCAGAGGCTTGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCACTTTGTGAAATTGTTCGCCTGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGCCATAGTCAGTGCAATCCAGATAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGATCTGCCCACCAGGCATGAGCCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTTGGATCTTTTCATGAACTCCTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCCTCCTGTGGGGAATACCCGGTTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAAATGGGGACCTTATGGAGCTGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTAACGAGGATAGCTAACTGTATCGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAAAGATCTTCCCGACGAAGTCAGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGAACACGGTAGATCTAGCCTTTTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATTATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGATCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATGACATTGGCAATGTTTCTTTTGATCGAGTATCAGACATCAACTTTACTCTCAATACAAATGAAAGTGGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATTGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATACAACAGTTTGATGATGGTGGCTCTGATGAGGAAGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATATGGGAGGAAAAGCACATCGCATTCACACCAGAATCCCAAAGACGATCCAGCTCGGGGAGTACAGACAGTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAAAGTACAGACTCTGAAGAAGAAGATGGAGCAAAGCAAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGG 1924
Query 1 -----ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCAC 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATAAAATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCAC 1998
Query 70 GGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTG 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTG 2072
Query 144 GGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGG 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGG 2146
Query 218 AAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGC 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGC 2220
Query 292 AGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGAT 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGAT 2294
Query 366 GAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAA------ 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAAGAGTGT 2368
Query 434 ------------GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGAAATCCTATCGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCC 2442
Query 496 GAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAG----------------- 552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGTGCCTCCGATGCCTG 2516
Query 553 -------------AGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TCTGTTGCTCCTTAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 2580
