Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NM_001352378.2
- Aligned Length:
- 2277
- Identities:
- 603
- Gaps:
- 1674
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGATAGACTGGGAGAAGATGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAATCCACTACTTGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTTCTTAAAGAAGAAGCATGATTTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCTCAGGCTCCTGACGTGTATCGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATTATCCAGAGGCTTGTGGAAATAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTGTGAAATTGTTCGCCTGAGCAGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCACTCTAGAAAAGCAAGAAATTATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATAGTCAGTGCAATCCAGATATTGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGCCCACCAGGCATGAGCCATTCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGATCTTTTCATGAACTCCTGCTGGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCTGTGGGGAATACCCGGTTGAATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGGGGACCTTATGGAGCTGAATAGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGCATACACAAGTGGAAATTTGTATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TACCGATCAAGACTCCACTGGTGATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACTTGAAGCCTGGGAAATGAATGAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGAGGATAGCTAACTGTATCGTGCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGATCTTCCCGACGAAGTCAGGGAACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACACGGTAGATCTAGCCTTTTCTGATTATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACGATGAGAAGTTTGCAGATCAAGATGACATTGGCAATGTTTCTTTTGATCGAGTATCAGACATCAACTTTAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTCAATACAAATGAAAGTGGAAATATTGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATACAACAGTTTGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGGTGGCTCTGATGAGGAAGATATATGGGAGGAAAAGCACATCGCATTCACACCAGAATCCCAAAGACGATCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCTCGGGGAGTACAGACAGTGAGGAAAGTACAGACTCTGAAGAAGAAGATGGAGCAAAGCAAGACTTGTTTGA 1628
Query 1 ----------------------------ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTG 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ACCCAGCAGTGCCAACACGGAGGATAAAATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTG 1702
Query 47 ATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCG 1776
Query 121 ATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAG 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAG 1850
Query 195 GAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGG 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGG 1924
Query 269 CAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACA 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACA 1998
Query 343 GACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGA 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGA 2072
Query 417 GACTGCGGTCTTCAAAA------------------GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTT 472
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GACTGCGGTCTTCAAAAGAGTGTTGAAATCCTATCGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTT 2146
Query 473 GTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCC 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCC 2220
Query 547 GAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 2277
