Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NR_147965.2
- Aligned Length:
- 4908
- Identities:
- 603
- Gaps:
- 4305
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCTTCGCTGATGGTGTCGGTGAGCGCGTTTCCCGCCTGAGCGCAACTAGCGGCGGGTCGTGGGCACCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAGAGCTTGTTTCATATCCATATCCCACTGTATTCCTGCTAATCTGCTAATGCAGTAAATTGGAGGAAAACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTACCAGGATAACCTGTAATGGGCAAGGAGCCACAAAGAAGAAAACATTTCTTTTAATTTTTAAACTTGGTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAAGGTATCCAAATATATCTTGTGAGTTGCTCACTTCTGATGTCTCCCAGATGAATGATAGACTGGGAGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTAAAGAAGAAGCATGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTGTTGCTCAGGCTCCTGACGTGTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAAAATTATCCAGAGGCTTGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCACTTTGTGAAATTGTTCGCCTGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGCCATAGTCAGTGCAATCCAGATAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGATCTGCCCACCAGGCATGAGCCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTTGGATCTTTTCATGAACTCCTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCCTCCTGTGGGGAATACCCGGTTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAAATGGGGACCTTATGGAGCTGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTAACGAGGATAGCTAACTGTATCGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAAAGATCTTCCCGACGAAGTCAGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGAACACGGTAGATCTAGCCTTTTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATTATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGATCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATGACATTGGCAATGTTTCTTTTGATCGAGTATCAGACATCAACTTTACTCTCAATACAAATGAAAGTGGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATTGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATACAACAGTTTGATGATGGTGGCTCTGATGAGGAAGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATATGGGAGGAAAAGCACATCGCATTCACACCAGAATCCCAAAGACGATCCAGCTCGGGGAGTACAGACAGTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAAAGTACAGACTCTGAAGAAGAAGATGGAGCAAAGCAAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGG 1924
Query 1 -----ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCAC 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATAAAATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCAC 1998
Query 70 GGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTG 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTG 2072
Query 144 GGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGG 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGG 2146
Query 218 AAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGC 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGC 2220
Query 292 AGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGAT 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGAT 2294
Query 366 GAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAA------ 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAAGGTTCT 2368
Query 434 -------------------------------------------------------------------------- 433
Sbjct 2369 TTGACACCTTCACCGAGTCTGCAGTTTTGCTTACGTGCAGTCGTGGACATATTATTCCCCCAAATTCCTCATTT 2442
Query 434 -------------------------------------------------------------------------- 433
Sbjct 2443 CTAGGAGTATTCTGAAACTCTTGTACATTTCTTTTTCTGTTTTGCACACTGGGCTTCAGAGTGTTGAAATCCTA 2516
Query 434 --GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAG 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TCGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAG 2590
Query 506 AGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGT 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGT 2664
Query 580 GACACTTCAGTGAATGGCCCTGTA-------------------------------------------------- 603
||||||||||||||||||||||||
Sbjct 2665 GACACTTCAGTGAATGGCCCTGTATGACGGGTGACGTCTGCTGCTGCTGACTGAGGACTGCAGACCGCCACCAC 2738
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2739 TCAGGGGCTCTGGAGGGGTCAGCTGGAGCCCACCAAGCTGTCACTGCTGCACTCACTCTGCAAGGGATCAGGAC 2812
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2813 CAGCAACCTTTATATTCTAGATTCTAAGACATTGTACAGAGAAATTCAGAAGTGTAAAAATATTGCACATTGAC 2886
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2887 AAATACCAAGAATTTTTGCGTATGTTTATATTGTATTGTTCTAAATAATGGGTAGCCTGTGAAATAAGATCTTG 2960
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2961 CCACCCATGTAATAATAGTAGTAATACTATAGTTAAAATGGCTGTAAGAATAGTTTTATAAAAGTGAATACACA 3034
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3035 GATCTATTGTATTTGAAACATAACTTTGACAATTATTAGTGTGACCAAAGTATTAGGCGGTTTTCATACATTTT 3108
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3109 TCACCTTGTACAAAATTATGAATTCATTTTTCCTCCAGGCCGACAAGGAGTTGTAGAATGAAAATGCCCTCTAA 3182
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3183 GTGTTATTTTGGTTGTTCTAACTTACAAAAGTGATTTTGAATAAGAAATATTTGGTGTTCTTTTTATAACCAGT 3256
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3257 TTTTGATTGGTAATTGTTTTCTGTATTGTTTAAAACGGATCAAAAATGTAAGTCTATTGGTAGAGATTAAGTAA 3330
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3331 AGTATTTATTGCTACATCATAGTTGATAAATTGATGTTATCGTAAAGCCATATGTTCTGTTCAAGTCTTGTTTG 3404
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3405 CTTGAAATGATTATTCCTACAAGTGAAACACTAGACTATTTGGAGTGTATATGGCTTGTGTTTTGGGATTTTTT 3478
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3479 TTTTTTTTTTTTGGCTTTTGTTTTTGTTTGTTTTTTTGTTTCATTTGGTAGTTCATCTGCCTTTTAACCCATTC 3552
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3553 ACCAAAATTTACCTTGTTAACAAGCATCACCAATGAACATTTCAGAGCAATCTGCATATTTAACAGACCTAAAA 3626
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3627 TAAATCCTATTAGGCAAGTCAGTTGAAAATGCTCGTGCTGCTAATGGAATTAGAGTGCGTTCATTTTACAGGCT 3700
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3701 AGTATTTTAAAAGTAGAAATCAAAATCTGGCACCGAAGCATGCTAATTGTTTACTGTACCTTGTGAGGTTTTCA 3774
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3775 CTCATAAATTTAAACCAGTGTATTTTTTTAGAACTGGTTTGTGTATATATATAGTGATTATGGATACTAATTCA 3848
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3849 ATGTAATTTATAATTTTCTATGTCAATACAAAAATACATCACAGCCTTCTCAAACAGCTCAAGCAATATATTGT 3922
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3923 ATATTGCCATATCGTCTGGTGAAAGGGTTAAATTACTTCACCTCTTGCACTTTTAGATGCAAATCAGTTTTTCA 3996
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3997 TTTCTGTAATAGAAAATTATTCACGTATTTTTACATCATTTGTTTTTCCTGACCAGTATTTAAAACCAAAAGGA 4070
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4071 TATTCTGAAAAATGGCCAACAATTTTTTTAGAAGTAGCATCCCAAGCAGCGTGCCTAAACATTACATTGCATAT 4144
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4145 GGAAATAAAAGAATCAAACGTCTAATGCCTTATTATTTCTGATTTCCTTTTTCATTTTAAGTGGTGTGGAGATT 4218
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4219 CCAGCACTCCCAGGACAGTGGAGTCAGCAGTAAGCCCTGGGACAGGTGGCAAGGGTGGGTCCCTTGACCTTTGC 4292
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4293 ACGCCTCCTCAGGAACCCCCTTTCCCGGGTGAGCCCCTCTCTGAAGAGACTGTCCTTGGGCCTCCTCTGGAAGC 4366
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4367 AGCACCCCCAGAGGACAGGGCTCCTCCTGCTTGCCTCAGGGCTGCCTGACTTGAATGGCGTTGGACCTCGGGGA 4440
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4441 TTACTGGTAGATAATATGCTCTGGTCTCGCCTGGTGGTGAGTTTTGCCAGCCATGGCCAGGGTTTGGCTCCACT 4514
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4515 GGTGGCACACGTGGCCTCCGTGGTATGGACCTGGTGGCTTCTCCATCCCACTGTGGCCTCTGTGGTATGGACCT 4588
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4589 GGTGGCTTCTCCATCCTACCCAAGGTAACAGTGTCTTGCTTCATCCCACTGACTGCTGGGAGAGAGCCTCTGGG 4662
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4663 ACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTAGCAGGGAAAGGATATGACAATGGGGAGGACAGTTCT 4736
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4737 TTTGGAGGTTGGAGGGGCCAAGCCAAGGACAGGAGCAAGTGTGCCCTCATTTTGTTTCTACTTTTAATTTCTGT 4810
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4811 GTGTTGGCCATACTGAATTATGAGACTAACAGATGTCTACAATACAATACCTGTATTCAAAATAACAAAAATAA 4884
Query 604 ------------------------ 603
Sbjct 4885 AGCCTGATTCTTTGTTTCTAGAAA 4908
