Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NR_147966.2
- Aligned Length:
- 5358
- Identities:
- 603
- Gaps:
- 4755
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCTTCGCTGATGGTGTCGGTGAGCGCGTTTCCCGCCTGAGCGCAACTAGCGGCGGGTCGTGGGCACCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCTCAGAAGGAAAGAAAACATCTCCCAGGACCAGATGTGGAGTAGATGGGAGTTGGAGAGAAGCTGAAGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGCCCAGCAACAGGCTGGGGGCCCAGGTGCTTCGGGGGTCCCAGCCATTAACAGAGCTTCGTGCAGGAGAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTTTCATATCCATATCCCACTGTATTCCTGCTAATCTGCTAATGCAGTAAATTGGAGGAAAACTGTTACCAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATAACCTGTAATGGGCAAGGAGCCACAAAGAAGAAAACATTTCTTTTAATTTTTAAACTTGGTTTGAAAGACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACACTTCTAGAAAGAGAAGATGTAACACTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGAGTTAATGGATGAGGAAGATGTTTTACAGGAATGTAAAGCTCAGAACCGCAAACTTATAGAGTTTCTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAAAGCAGAATGTCTCGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGACATGGATGAAAAGATCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATACAAGTATCCAAATATATCTTGTGAGTTGCTCACTTCTGATGTCTCCCAGATGAATGATAGACTGGGAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTAAAGAAGAAGCATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATTTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTGTTGCTCAGGCTCCTGACGTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAAAATTATCCAGAGGCTTGTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCACTTTGTGAAATTGTTCGCCTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGCCATAGTCAGTGCAATCCAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGATCTGCCCACCAGGCATGAGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTTGGATCTTTTCATGAACTCCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCCTCCTGTGGGGAATACCCGGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAAATGGGGACCTTATGGAGCTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATAGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTAACGAGGATAGCTAACTGTATC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAAAGATCTTCCCGACGAAGTCAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGAACACGGTAGATCTAGTTACAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGAAACGGGTTTCTCACAGGATTCTTCTTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGCAAAAAAACACACCAACTTTTATAGCCCTATGGCTATGTAAATAAGATGATTTCTGGAACACAAATGGGCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATAGTATGTAGAATATCATTAGAATCATTATATCACTGTCACTGGTCCTGGGGTTGCCAGGCCTTTTCTGATT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGATCAAGAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACATTGGCAATGTTTCTTTTGATCGAGTATCAGACATCAACTTTACTCTCAATACAAATGAAAGTGGAAATAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATACAACAGTTTGATGATGGTGGCTCTGATGAGGAAGATATAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGGAGGAAAAGCACATCGCATTCACACCAGAATCCCAAAGACGATCCAGCTCGGGGAGTACAGACAGTGAGGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGTACAGACTCTGAAGAAGAAGATGGAGCAAAGCAAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGGATAA 2516
Query 1 -ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTG 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 AATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTG 2590
Query 74 CTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCT 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCT 2664
Query 148 TCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAAC 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAAC 2738
Query 222 CAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTG 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTG 2812
Query 296 TGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAAT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAAT 2886
Query 370 GGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAA---------- 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAAGAGTGTTGAA 2960
Query 434 --------GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGA 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 ATCCTATCGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGA 3034
Query 500 CTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCA 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCA 3108
Query 574 CCAGGTGACACTTCAGTGAATGGCCCTGTA-------------------------------------------- 603
||||||||||||||||||||||||||||||
Sbjct 3109 CCAGGTGACACTTCAGTGAATGGCCCTGTATGACGGGTGACGTCTGCTGCTGCTGACTGAGGACTGCAGACCGC 3182
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3183 CACCACTCAGGGGCTCTGGAGGGGTCAGCTGGAGCCCACCAAGCTGTCACTGCTGCACTCACTCTGCAAGGGAT 3256
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3257 CAGGACCAGCAACCTTTATATTCTAGATTCTAAGACATTGTACAGAGAAATTCAGAAGTGTAAAAATATTGCAC 3330
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3331 ATTGACAAATACCAAGAATTTTTGCGTATGTTTATATTGTATTGTTCTAAATAATGGGTAGCCTGTGAAATAAG 3404
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3405 ATCTTGCCACCCATGTAATAATAGTAGTAATACTATAGTTAAAATGGCTGTAAGAATAGTTTTATAAAAGTGAA 3478
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3479 TACACAGATCTATTGTATTTGAAACATAACTTTGACAATTATTAGTGTGACCAAAGTATTAGGCGGTTTTCATA 3552
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3553 CATTTTTCACCTTGTACAAAATTATGAATTCATTTTTCCTCCAGGCCGACAAGGAGTTGTAGAATGAAAATGCC 3626
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3627 CTCTAAGTGTTATTTTGGTTGTTCTAACTTACAAAAGTGATTTTGAATAAGAAATATTTGGTGTTCTTTTTATA 3700
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3701 ACCAGTTTTTGATTGGTAATTGTTTTCTGTATTGTTTAAAACGGATCAAAAATGTAAGTCTATTGGTAGAGATT 3774
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3775 AAGTAAAGTATTTATTGCTACATCATAGTTGATAAATTGATGTTATCGTAAAGCCATATGTTCTGTTCAAGTCT 3848
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3849 TGTTTGCTTGAAATGATTATTCCTACAAGTGAAACACTAGACTATTTGGAGTGTATATGGCTTGTGTTTTGGGA 3922
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3923 TTTTTTTTTTTTTTTTTTGGCTTTTGTTTTTGTTTGTTTTTTTGTTTCATTTGGTAGTTCATCTGCCTTTTAAC 3996
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3997 CCATTCACCAAAATTTACCTTGTTAACAAGCATCACCAATGAACATTTCAGAGCAATCTGCATATTTAACAGAC 4070
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4071 CTAAAATAAATCCTATTAGGCAAGTCAGTTGAAAATGCTCGTGCTGCTAATGGAATTAGAGTGCGTTCATTTTA 4144
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4145 CAGGCTAGTATTTTAAAAGTAGAAATCAAAATCTGGCACCGAAGCATGCTAATTGTTTACTGTACCTTGTGAGG 4218
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4219 TTTTCACTCATAAATTTAAACCAGTGTATTTTTTTAGAACTGGTTTGTGTATATATATAGTGATTATGGATACT 4292
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4293 AATTCAATGTAATTTATAATTTTCTATGTCAATACAAAAATACATCACAGCCTTCTCAAACAGCTCAAGCAATA 4366
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4367 TATTGTATATTGCCATATCGTCTGGTGAAAGGGTTAAATTACTTCACCTCTTGCACTTTTAGATGCAAATCAGT 4440
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4441 TTTTCATTTCTGTAATAGAAAATTATTCACGTATTTTTACATCATTTGTTTTTCCTGACCAGTATTTAAAACCA 4514
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4515 AAAGGATATTCTGAAAAATGGCCAACAATTTTTTTAGAAGTAGCATCCCAAGCAGCGTGCCTAAACATTACATT 4588
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4589 GCATATGGAAATAAAAGAATCAAACGTCTAATGCCTTATTATTTCTGATTTCCTTTTTCATTTTAAGTGGTGTG 4662
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4663 GAGATTCCAGCACTCCCAGGACAGTGGAGTCAGCAGTAAGCCCTGGGACAGGTGGCAAGGGTGGGTCCCTTGAC 4736
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4737 CTTTGCACGCCTCCTCAGGAACCCCCTTTCCCGGGTGAGCCCCTCTCTGAAGAGACTGTCCTTGGGCCTCCTCT 4810
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4811 GGAAGCAGCACCCCCAGAGGACAGGGCTCCTCCTGCTTGCCTCAGGGCTGCCTGACTTGAATGGCGTTGGACCT 4884
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4885 CGGGGATTACTGGTAGATAATATGCTCTGGTCTCGCCTGGTGGTGAGTTTTGCCAGCCATGGCCAGGGTTTGGC 4958
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4959 TCCACTGGTGGCACACGTGGCCTCCGTGGTATGGACCTGGTGGCTTCTCCATCCCACTGTGGCCTCTGTGGTAT 5032
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5033 GGACCTGGTGGCTTCTCCATCCTACCCAAGGTAACAGTGTCTTGCTTCATCCCACTGACTGCTGGGAGAGAGCC 5106
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5107 TCTGGGACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTAGCAGGGAAAGGATATGACAATGGGGAGGAC 5180
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5181 AGTTCTTTTGGAGGTTGGAGGGGCCAAGCCAAGGACAGGAGCAAGTGTGCCCTCATTTTGTTTCTACTTTTAAT 5254
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5255 TTCTGTGTGTTGGCCATACTGAATTATGAGACTAACAGATGTCTACAATACAATACCTGTATTCAAAATAACAA 5328
Query 604 ------------------------------ 603
Sbjct 5329 AAATAAAGCCTGATTCTTTGTTTCTAGAAA 5358
