Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NR_147967.2
- Aligned Length:
- 5367
- Identities:
- 603
- Gaps:
- 4764
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCTTCGCTGATGGTGTCGGTGAGCGCGTTTCCCGCCTGAGCGCAACTAGCGGCGGGTCGTGGGCACCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCTCAGAAGGAAAGAAAACATCTCCCAGGACCAGATGTGGAGTAGATGGGAGTTGGAGAGAAGCTGAAGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGCCCAGCAACAGGCTGGGGGCCCAGGTGCTTCGGGGGTCCCAGCCATTAACAGAGCTTCGTGCAGGAGAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTTTCATATCCATATCCCACTGTATTCCTGCTAATCTGCTAATGCAGTAAATTGGAGGAAAACTGTTACCAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATAACCTGTAATGGGCAAGGAGCCACAAAGAAGAAAACATTTCTTTTAATTTTTAAACTTGGTTTGAAAGACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACACTTCTAGAAAGAGAAGATGTAACACTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGAGTTAATGGATGAGGAAGATGTTTTACAGGAATGTAAAGCTCAGAACCGCAAACTTATAGAGTTTCTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAAAGCAGAATGTCTCGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGACATGGATGAAAAGATCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATACAAGTATCCAAATATATCTTGTGAGTTGCTCACTTCTGATGTCTCCCAGATGAATGATAGACTGGGAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTAAAGAAGAAGCATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATTTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTGTTGCTCAGGCTCCTGACGTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAAAATTATCCAGAGGCTTGTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCACTTTGTGAAATTGTTCGCCTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGCCATAGTCAGTGCAATCCAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGATCTGCCCACCAGGCATGAGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTTGGATCTTTTCATGAACTCCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCCTCCTGTGGGGAATACCCGGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAAATGGGGACCTTATGGAGCTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATAGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTAACGAGGATAGCTAACTGTATC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAAAGATCTTCCCGACGAAGTCAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGAACACGGTAGATCTAGTTACAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGAAACGGGTTTCTCACAGGATTCTTCTTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGCAAGCCTTTTCTGATTATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAAGTTTGCAGATCAAGATGACATTGGCAATGTTTCTTTTGATCGAGTATCAGACATCAACTTTACTCTCAATA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAAATGAAAGTGGAAATATTGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATACAACAGTTTGATGATGGTGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCTGATGAGGAAGATATATGGGAGGAAAAGCACATCGCATTCACACCAGAATCCCAAAGACGATCCAGCTCGGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAGTACAGACAGTGAGGAAAGTACAGACTCTGAAGAAGAAGATGGAGCAAAGCAAGACTTGTTTGAACCCAGCA 2368
Query 1 --------------------ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCA 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GTGCCAACACGGAGGATAAAATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCA 2442
Query 55 ATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAAC 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAAC 2516
Query 129 TAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATT 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATT 2590
Query 203 CTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAG 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAG 2664
Query 277 CCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGT 2738
Query 351 AACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGG 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGG 2812
Query 425 TCTTCAAAA----------------------------------------------------------------- 433
|||||||||
Sbjct 2813 TCTTCAAAAGGTTCTTTGACACCTTCACCGAGTCTGCAGTTTTGCTTACGTGCAGTCGTGGACATATTATTCCC 2886
Query 434 -------------------------------------------------------------------------- 433
Sbjct 2887 CCAAATTCCTCATTTCTAGGAGTATTCTGAAACTCTTGTACATTTCTTTTTCTGTTTTGCACACTGGGCTTCAG 2960
Query 434 -----------------GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGT 490
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 AGTGTTGAAATCCTATCGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGT 3034
Query 491 GTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAA 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAA 3108
Query 565 CCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA----------------------------------- 603
|||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTATGACGGGTGACGTCTGCTGCTGCTGACTGAGGACT 3182
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3183 GCAGACCGCCACCACTCAGGGGCTCTGGAGGGGTCAGCTGGAGCCCACCAAGCTGTCACTGCTGCACTCACTCT 3256
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3257 GCAAGGGATCAGGACCAGCAACCTTTATATTCTAGATTCTAAGACATTGTACAGAGAAATTCAGAAGTGTAAAA 3330
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3331 ATATTGCACATTGACAAATACCAAGAATTTTTGCGTATGTTTATATTGTATTGTTCTAAATAATGGGTAGCCTG 3404
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3405 TGAAATAAGATCTTGCCACCCATGTAATAATAGTAGTAATACTATAGTTAAAATGGCTGTAAGAATAGTTTTAT 3478
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3479 AAAAGTGAATACACAGATCTATTGTATTTGAAACATAACTTTGACAATTATTAGTGTGACCAAAGTATTAGGCG 3552
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3553 GTTTTCATACATTTTTCACCTTGTACAAAATTATGAATTCATTTTTCCTCCAGGCCGACAAGGAGTTGTAGAAT 3626
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3627 GAAAATGCCCTCTAAGTGTTATTTTGGTTGTTCTAACTTACAAAAGTGATTTTGAATAAGAAATATTTGGTGTT 3700
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3701 CTTTTTATAACCAGTTTTTGATTGGTAATTGTTTTCTGTATTGTTTAAAACGGATCAAAAATGTAAGTCTATTG 3774
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3775 GTAGAGATTAAGTAAAGTATTTATTGCTACATCATAGTTGATAAATTGATGTTATCGTAAAGCCATATGTTCTG 3848
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3849 TTCAAGTCTTGTTTGCTTGAAATGATTATTCCTACAAGTGAAACACTAGACTATTTGGAGTGTATATGGCTTGT 3922
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3923 GTTTTGGGATTTTTTTTTTTTTTTTTTGGCTTTTGTTTTTGTTTGTTTTTTTGTTTCATTTGGTAGTTCATCTG 3996
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3997 CCTTTTAACCCATTCACCAAAATTTACCTTGTTAACAAGCATCACCAATGAACATTTCAGAGCAATCTGCATAT 4070
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4071 TTAACAGACCTAAAATAAATCCTATTAGGCAAGTCAGTTGAAAATGCTCGTGCTGCTAATGGAATTAGAGTGCG 4144
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4145 TTCATTTTACAGGCTAGTATTTTAAAAGTAGAAATCAAAATCTGGCACCGAAGCATGCTAATTGTTTACTGTAC 4218
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4219 CTTGTGAGGTTTTCACTCATAAATTTAAACCAGTGTATTTTTTTAGAACTGGTTTGTGTATATATATAGTGATT 4292
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4293 ATGGATACTAATTCAATGTAATTTATAATTTTCTATGTCAATACAAAAATACATCACAGCCTTCTCAAACAGCT 4366
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4367 CAAGCAATATATTGTATATTGCCATATCGTCTGGTGAAAGGGTTAAATTACTTCACCTCTTGCACTTTTAGATG 4440
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4441 CAAATCAGTTTTTCATTTCTGTAATAGAAAATTATTCACGTATTTTTACATCATTTGTTTTTCCTGACCAGTAT 4514
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4515 TTAAAACCAAAAGGATATTCTGAAAAATGGCCAACAATTTTTTTAGAAGTAGCATCCCAAGCAGCGTGCCTAAA 4588
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4589 CATTACATTGCATATGGAAATAAAAGAATCAAACGTCTAATGCCTTATTATTTCTGATTTCCTTTTTCATTTTA 4662
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4663 AGTGGTGTGGAGATTCCAGCACTCCCAGGACAGTGGAGTCAGCAGTAAGCCCTGGGACAGGTGGCAAGGGTGGG 4736
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4737 TCCCTTGACCTTTGCACGCCTCCTCAGGAACCCCCTTTCCCGGGTGAGCCCCTCTCTGAAGAGACTGTCCTTGG 4810
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4811 GCCTCCTCTGGAAGCAGCACCCCCAGAGGACAGGGCTCCTCCTGCTTGCCTCAGGGCTGCCTGACTTGAATGGC 4884
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4885 GTTGGACCTCGGGGATTACTGGTAGATAATATGCTCTGGTCTCGCCTGGTGGTGAGTTTTGCCAGCCATGGCCA 4958
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4959 GGGTTTGGCTCCACTGGTGGCACACGTGGCCTCCGTGGTATGGACCTGGTGGCTTCTCCATCCCACTGTGGCCT 5032
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5033 CTGTGGTATGGACCTGGTGGCTTCTCCATCCTACCCAAGGTAACAGTGTCTTGCTTCATCCCACTGACTGCTGG 5106
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5107 GAGAGAGCCTCTGGGACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTAGCAGGGAAAGGATATGACAAT 5180
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5181 GGGGAGGACAGTTCTTTTGGAGGTTGGAGGGGCCAAGCCAAGGACAGGAGCAAGTGTGCCCTCATTTTGTTTCT 5254
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5255 ACTTTTAATTTCTGTGTGTTGGCCATACTGAATTATGAGACTAACAGATGTCTACAATACAATACCTGTATTCA 5328
Query 604 --------------------------------------- 603
Sbjct 5329 AAATAACAAAAATAAAGCCTGATTCTTTGTTTCTAGAAA 5367
