Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NR_147970.2
- Aligned Length:
- 4944
- Identities:
- 603
- Gaps:
- 4341
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCTTCGCTGATGGTGTCGGTGAGCGCGTTTCCCGCCTGAGCGCAACTAGCGGCGGGTCGTGGGCACCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAGAGCTTGTTTCATATCCATATCCCACTGTATTCCTGCTAATCTGCTAATGCAGTAAATTGGAGGAAAACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTACCAGGATAACCTGTAATGGGCAAGGAGCCACAAAGAAGAAAACATTTCTTTTAATTTTTAAACTTGGTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAAGGTATCCAAATATATCTTGTGAGTTGCTCACTTCTGATGTCTCCCAGATGAATGATAGACTGGGAGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTAAAGAAGAAGCATGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGTAGACCTTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTGTTGCTCAGGCTCCTGACGTGTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAACCTCCACAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAAAATTATCCAGAGGCTTGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGTTCATCCATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCACTTTGTGAAATTGTTCGCCTGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACCAGATGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATAGAGCAGCTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGCCATAGTCAGTGCAATCCAGATAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGACTTTACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGATCTGCCCACCAGGCATGAGCCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCTTGTTCAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTTGGATCTTTTCATGAACTCCTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAGCCACCCAAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCCTCCTGTGGGGAATACCCGGTTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTCATTAGGTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAAATGGGGACCTTATGGAGCTGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCATTGGAGTCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGAAACAGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTAACGAGGATAGCTAACTGTATCGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACAGCACTGACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAAAGATCTTCCCGACGAAGTCAGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGAACACGGTAGATCTAGTTACAACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGAAACGGGTTTCTCACAGGATTCTTCTTTGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCAATTTGGCTTCAACGATGAGAAGTTTGCAGATCAAGATGACATTGGCAATGTTTCTTTTGATCGAGTATCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACATCAACTTTACTCTCAATACAAATGAAAGTGGAAATATTGCCTTGTTTGAAGCATGTTGTAAGGAAAGAATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAACAGTTTGATGATGGTGGCTCTGATGAGGAAGATATATGGGAGGAAAAGCACATCGCATTCACACCAGAATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAAAGACGATCCAGCTCGGGGAGTACAGACAGTGAGGAAAGTACAGACTCTGAAGAAGAAGATGGAGCAAAGC 1924
Query 1 -----------------------------------------ATGGAGGTGGACCTGAGTGAACCACCCAACTGG 33
|||||||||||||||||||||||||||||||||
Sbjct 1925 AAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGGATAAAATGGAGGTGGACCTGAGTGAACCACCCAACTGG 1998
Query 34 TCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAG 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAG 2072
Query 108 CACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAA 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAA 2146
Query 182 AAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGT 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGT 2220
Query 256 GCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGA 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGA 2294
Query 330 TGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAG 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAG 2368
Query 404 ATGCCAAGACAGAGACTGCGGTCTTCAAAA-------------------------------------------- 433
||||||||||||||||||||||||||||||
Sbjct 2369 ATGCCAAGACAGAGACTGCGGTCTTCAAAAGGTTCTTTGACACCTTCACCGAGTCTGCAGTTTTGCTTACGTGC 2442
Query 434 -------------------------------------------------------------------------- 433
Sbjct 2443 AGTCGTGGACATATTATTCCCCCAAATTCCTCATTTCTAGGAGTATTCTGAAACTCTTGTACATTTCTTTTTCT 2516
Query 434 --------------------------------------GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTG 469
||||||||||||||||||||||||||||||||||||
Sbjct 2517 GTTTTGCACACTGGGCTTCAGAGTGTTGAAATCCTATCGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTG 2590
Query 470 CTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGT 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGT 2664
Query 544 CCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA-------------- 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTATGACGGGTGACGTC 2738
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2739 TGCTGCTGCTGACTGAGGACTGCAGACCGCCACCACTCAGGGGCTCTGGAGGGGTCAGCTGGAGCCCACCAAGC 2812
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2813 TGTCACTGCTGCACTCACTCTGCAAGGGATCAGGACCAGCAACCTTTATATTCTAGATTCTAAGACATTGTACA 2886
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2887 GAGAAATTCAGAAGTGTAAAAATATTGCACATTGACAAATACCAAGAATTTTTGCGTATGTTTATATTGTATTG 2960
Query 604 -------------------------------------------------------------------------- 603
Sbjct 2961 TTCTAAATAATGGGTAGCCTGTGAAATAAGATCTTGCCACCCATGTAATAATAGTAGTAATACTATAGTTAAAA 3034
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3035 TGGCTGTAAGAATAGTTTTATAAAAGTGAATACACAGATCTATTGTATTTGAAACATAACTTTGACAATTATTA 3108
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3109 GTGTGACCAAAGTATTAGGCGGTTTTCATACATTTTTCACCTTGTACAAAATTATGAATTCATTTTTCCTCCAG 3182
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3183 GCCGACAAGGAGTTGTAGAATGAAAATGCCCTCTAAGTGTTATTTTGGTTGTTCTAACTTACAAAAGTGATTTT 3256
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3257 GAATAAGAAATATTTGGTGTTCTTTTTATAACCAGTTTTTGATTGGTAATTGTTTTCTGTATTGTTTAAAACGG 3330
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3331 ATCAAAAATGTAAGTCTATTGGTAGAGATTAAGTAAAGTATTTATTGCTACATCATAGTTGATAAATTGATGTT 3404
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3405 ATCGTAAAGCCATATGTTCTGTTCAAGTCTTGTTTGCTTGAAATGATTATTCCTACAAGTGAAACACTAGACTA 3478
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3479 TTTGGAGTGTATATGGCTTGTGTTTTGGGATTTTTTTTTTTTTTTTTTGGCTTTTGTTTTTGTTTGTTTTTTTG 3552
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3553 TTTCATTTGGTAGTTCATCTGCCTTTTAACCCATTCACCAAAATTTACCTTGTTAACAAGCATCACCAATGAAC 3626
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3627 ATTTCAGAGCAATCTGCATATTTAACAGACCTAAAATAAATCCTATTAGGCAAGTCAGTTGAAAATGCTCGTGC 3700
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3701 TGCTAATGGAATTAGAGTGCGTTCATTTTACAGGCTAGTATTTTAAAAGTAGAAATCAAAATCTGGCACCGAAG 3774
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3775 CATGCTAATTGTTTACTGTACCTTGTGAGGTTTTCACTCATAAATTTAAACCAGTGTATTTTTTTAGAACTGGT 3848
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3849 TTGTGTATATATATAGTGATTATGGATACTAATTCAATGTAATTTATAATTTTCTATGTCAATACAAAAATACA 3922
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3923 TCACAGCCTTCTCAAACAGCTCAAGCAATATATTGTATATTGCCATATCGTCTGGTGAAAGGGTTAAATTACTT 3996
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3997 CACCTCTTGCACTTTTAGATGCAAATCAGTTTTTCATTTCTGTAATAGAAAATTATTCACGTATTTTTACATCA 4070
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4071 TTTGTTTTTCCTGACCAGTATTTAAAACCAAAAGGATATTCTGAAAAATGGCCAACAATTTTTTTAGAAGTAGC 4144
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4145 ATCCCAAGCAGCGTGCCTAAACATTACATTGCATATGGAAATAAAAGAATCAAACGTCTAATGCCTTATTATTT 4218
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4219 CTGATTTCCTTTTTCATTTTAAGTGGTGTGGAGATTCCAGCACTCCCAGGACAGTGGAGTCAGCAGTAAGCCCT 4292
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4293 GGGACAGGTGGCAAGGGTGGGTCCCTTGACCTTTGCACGCCTCCTCAGGAACCCCCTTTCCCGGGTGAGCCCCT 4366
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4367 CTCTGAAGAGACTGTCCTTGGGCCTCCTCTGGAAGCAGCACCCCCAGAGGACAGGGCTCCTCCTGCTTGCCTCA 4440
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4441 GGGCTGCCTGACTTGAATGGCGTTGGACCTCGGGGATTACTGGTAGATAATATGCTCTGGTCTCGCCTGGTGGT 4514
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4515 GAGTTTTGCCAGCCATGGCCAGGGTTTGGCTCCACTGGTGGCACACGTGGCCTCCGTGGTATGGACCTGGTGGC 4588
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4589 TTCTCCATCCCACTGTGGCCTCTGTGGTATGGACCTGGTGGCTTCTCCATCCTACCCAAGGTAACAGTGTCTTG 4662
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4663 CTTCATCCCACTGACTGCTGGGAGAGAGCCTCTGGGACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTA 4736
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4737 GCAGGGAAAGGATATGACAATGGGGAGGACAGTTCTTTTGGAGGTTGGAGGGGCCAAGCCAAGGACAGGAGCAA 4810
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4811 GTGTGCCCTCATTTTGTTTCTACTTTTAATTTCTGTGTGTTGGCCATACTGAATTATGAGACTAACAGATGTCT 4884
Query 604 ------------------------------------------------------------ 603
Sbjct 4885 ACAATACAATACCTGTATTCAAAATAACAAAAATAAAGCCTGATTCTTTGTTTCTAGAAA 4944
