Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- NR_147971.2
- Aligned Length:
- 5328
- Identities:
- 603
- Gaps:
- 4725
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCTTCGCTGATGGTGTCGGTGAGCGCGTTTCCCGCCTGAGCGCAACTAGCGGCGGGTCGTGGGCACCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGATAAGAAAACAAGCTCAGAGAGATGTGGTGACTTGCTCAAATAGTGACAGAACTTCCTCGGCCATATGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTCATATAATACCCTTGTGTCTTCAGTTTGAGGTACCTCCCATAATTTTAAGGGGAGAGCTTGTTTCATATCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATATCCCACTGTATTCCTGCTAATCTGCTAATGCAGTAAATTGGAGGAAAACTGTTACCAGGATAACCTGTAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCAAGGAGCCACAAAGAAGAAAACATTTCTTTTAATTTTTAAACTTGGTTTGAAAGACCAGCATGTTTTGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATTTGATCTTCACTCATCATCCCACATAGACACACTTCTAGAAAGAGAAGATGTAACACTGAAGGAGTTAATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGAGGAAGATGTTTTACAGGAATGTAAAGCTCAGAACCGCAAACTTATAGAGTTTCTGTTAAAAGCAGAATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTCGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGACATGGATGAAAAGATCAGATACAAGTATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAATATATCTTGTGAGTTGCTCACTTCTGATGTCTCCCAGATGAATGATAGACTGGGAGAAGATGAATCCTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTTCTTCAGCAAGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTAAAGAAGAAGCATGATTTTGTAGACC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTGTTGCTCAGGCTCCTGACGTGTATCGAACCTCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGCCCAGGCAAGATGTGCTGAATTGGTTAAATGAGGAGAAAATTATCCAGAGGCTTGTGGAAATAGTTCATCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATCGCAAGAAGAAGATCGACATTCAAATGCATCACAATCACTTTGTGAAATTGTTCGCCTGAGCAGAGACCAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTTACAAATTCAGAACAGTACAGAGCCCGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAATTATAGAGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTCTATCAAATATTTTCCACAAGGAGAAAAATGAGTCAGCCATAGTCAGTGCAATCCAGATATTGCTGACTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTTGAGACACGACGACCAACATTTGAAGGCCATATAGAGATCTGCCCACCAGGCATGAGCCATTCAGCTTGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGTAAACAAGAGTGTTCTAGAAGCCATCAGAGGAAGACTTGGATCTTTTCATGAACTCCTGCTGGAGCCACCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGAAAAGTGTGATGAAGACCACATGGGGTGTGCTGGATCCTCCTGTGGGGAATACCCGGTTGAATGTCATTAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTGATATCCAGCCTGCTTCAAACCAATACCAGCAGTATAAATGGGGACCTTATGGAGCTGAATAGCATTGGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCATATTGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATTTGTATTGCACTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGGTGATAATTTGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGAATGAGAAGAAAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGCTGAGGGAGGAAGACGGCATGGTTACATGGGACACCTAACGAGGATAGCTAACTGTATCGTGCACAGCACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACAAGGGCCCCAACAGTGCATTAGTGCAGCAGCTTATCAAAGATCTTCCCGACGAAGTCAGGGAACGATGGGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACGTTCTGCACAAGCTCCTTAGGAGAAACTAACAAGAGGAACACGGTAGATCTAGTTACAACCTGCCATATTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATTCATCCAGTGATGATGAAATTGACTTTAAAGAAACGGGTTTCTCACAGGATTCTTCTTTGCAGCAAAAAAAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACACCAACTTTTATAGCCCTATGGCTATGTAAATAAGATGATTTCTGGAACACAAATGGGCAAATAGTATGTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATATCATTAGAATCATTATATCACTGTCACTGGTCCTGGGGTTGCCAGGCCTTTTCTGATTATCAGATGCAAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGATCAAGATGACATTGGCAAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTTTCTTTTGATCGAGTATCAGACATCAACTTTACTCTCAATACAAATGAAAGTGGAAATATTGCCTTGTTTGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCATGTTGTAAGGAAAGAATACAACAGTTTGATGATGGTGGCTCTGATGAGGAAGATATATGGGAGGAAAAGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACATCGCATTCACACCAGAATCCCAAAGACGATCCAGCTCGGGGAGTACAGACAGTGAGGAAAGTACAGACTCT 2442
Query 1 ---------------------------------------------------------------ATGGAGGTGGA 11
|||||||||||
Sbjct 2443 GAAGAAGAAGATGGAGCAAAGCAAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGGATAAAATGGAGGTGGA 2516
Query 12 CCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATT 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATT 2590
Query 86 CTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAG 2664
Query 160 TTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACC 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACC 2738
Query 234 CATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGGCAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAG 2812
Query 308 CCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAG 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAG 2886
Query 382 GAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAAGTGAGGAAGGGAAACTGTCTAC 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAAGTGAGGAAGGGAAACTGTCTAC 2960
Query 456 CTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGC 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGC 3034
Query 530 CTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 3108
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3109 TGACGGGTGACGTCTGCTGCTGCTGACTGAGGACTGCAGACCGCCACCACTCAGGGGCTCTGGAGGGGTCAGCT 3182
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3183 GGAGCCCACCAAGCTGTCACTGCTGCACTCACTCTGCAAGGGATCAGGACCAGCAACCTTTATATTCTAGATTC 3256
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3257 TAAGACATTGTACAGAGAAATTCAGAAGTGTAAAAATATTGCACATTGACAAATACCAAGAATTTTTGCGTATG 3330
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3331 TTTATATTGTATTGTTCTAAATAATGGGTAGCCTGTGAAATAAGATCTTGCCACCCATGTAATAATAGTAGTAA 3404
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3405 TACTATAGTTAAAATGGCTGTAAGAATAGTTTTATAAAAGTGAATACACAGATCTATTGTATTTGAAACATAAC 3478
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3479 TTTGACAATTATTAGTGTGACCAAAGTATTAGGCGGTTTTCATACATTTTTCACCTTGTACAAAATTATGAATT 3552
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3553 CATTTTTCCTCCAGGCCGACAAGGAGTTGTAGAATGAAAATGCCCTCTAAGTGTTATTTTGGTTGTTCTAACTT 3626
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3627 ACAAAAGTGATTTTGAATAAGAAATATTTGGTGTTCTTTTTATAACCAGTTTTTGATTGGTAATTGTTTTCTGT 3700
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3701 ATTGTTTAAAACGGATCAAAAATGTAAGTCTATTGGTAGAGATTAAGTAAAGTATTTATTGCTACATCATAGTT 3774
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3775 GATAAATTGATGTTATCGTAAAGCCATATGTTCTGTTCAAGTCTTGTTTGCTTGAAATGATTATTCCTACAAGT 3848
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3849 GAAACACTAGACTATTTGGAGTGTATATGGCTTGTGTTTTGGGATTTTTTTTTTTTTTTTTTGGCTTTTGTTTT 3922
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3923 TGTTTGTTTTTTTGTTTCATTTGGTAGTTCATCTGCCTTTTAACCCATTCACCAAAATTTACCTTGTTAACAAG 3996
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3997 CATCACCAATGAACATTTCAGAGCAATCTGCATATTTAACAGACCTAAAATAAATCCTATTAGGCAAGTCAGTT 4070
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4071 GAAAATGCTCGTGCTGCTAATGGAATTAGAGTGCGTTCATTTTACAGGCTAGTATTTTAAAAGTAGAAATCAAA 4144
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4145 ATCTGGCACCGAAGCATGCTAATTGTTTACTGTACCTTGTGAGGTTTTCACTCATAAATTTAAACCAGTGTATT 4218
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4219 TTTTTAGAACTGGTTTGTGTATATATATAGTGATTATGGATACTAATTCAATGTAATTTATAATTTTCTATGTC 4292
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4293 AATACAAAAATACATCACAGCCTTCTCAAACAGCTCAAGCAATATATTGTATATTGCCATATCGTCTGGTGAAA 4366
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4367 GGGTTAAATTACTTCACCTCTTGCACTTTTAGATGCAAATCAGTTTTTCATTTCTGTAATAGAAAATTATTCAC 4440
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4441 GTATTTTTACATCATTTGTTTTTCCTGACCAGTATTTAAAACCAAAAGGATATTCTGAAAAATGGCCAACAATT 4514
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4515 TTTTTAGAAGTAGCATCCCAAGCAGCGTGCCTAAACATTACATTGCATATGGAAATAAAAGAATCAAACGTCTA 4588
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4589 ATGCCTTATTATTTCTGATTTCCTTTTTCATTTTAAGTGGTGTGGAGATTCCAGCACTCCCAGGACAGTGGAGT 4662
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4663 CAGCAGTAAGCCCTGGGACAGGTGGCAAGGGTGGGTCCCTTGACCTTTGCACGCCTCCTCAGGAACCCCCTTTC 4736
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4737 CCGGGTGAGCCCCTCTCTGAAGAGACTGTCCTTGGGCCTCCTCTGGAAGCAGCACCCCCAGAGGACAGGGCTCC 4810
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4811 TCCTGCTTGCCTCAGGGCTGCCTGACTTGAATGGCGTTGGACCTCGGGGATTACTGGTAGATAATATGCTCTGG 4884
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4885 TCTCGCCTGGTGGTGAGTTTTGCCAGCCATGGCCAGGGTTTGGCTCCACTGGTGGCACACGTGGCCTCCGTGGT 4958
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4959 ATGGACCTGGTGGCTTCTCCATCCCACTGTGGCCTCTGTGGTATGGACCTGGTGGCTTCTCCATCCTACCCAAG 5032
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5033 GTAACAGTGTCTTGCTTCATCCCACTGACTGCTGGGAGAGAGCCTCTGGGACTTTTCTTTGGGGCATCATTTTG 5106
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5107 TTTTGTCTTTCGTAGCAGGGAAAGGATATGACAATGGGGAGGACAGTTCTTTTGGAGGTTGGAGGGGCCAAGCC 5180
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5181 AAGGACAGGAGCAAGTGTGCCCTCATTTTGTTTCTACTTTTAATTTCTGTGTGTTGGCCATACTGAATTATGAG 5254
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5255 ACTAACAGATGTCTACAATACAATACCTGTATTCAAAATAACAAAAATAAAGCCTGATTCTTTGTTTCTAGAAA 5328
