Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- XM_011248640.1
- Aligned Length:
- 2620
- Identities:
- 525
- Gaps:
- 2018
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACGCTTCTAGAGAGAGAAGATGTGACACTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCTAATGGATGAGGAGGATGTTCTACAGGAGTGTAAAGCACAGAACCGCAAGCTCATAGAATTTCTGTTAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCAGAATGTCTGGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGATATGGATGAGAAGATCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACAAGTATCCAAATATATCTTGTGAGTTGCTCACATCTGATGTCTCCCAGATGAATGATAGACTGGGGGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGTCCTTGCTAATGAAATTGTATAGCTTCCTCCTAAATGAGTCCCCCTTGAACCCACTACTCGCCAGTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTGAAAAAGAAGCGTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGTGGATCTCATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTATTGCTCAGGCTCTTGACATGTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGCCTCCACAACCCAGGCAAGATGTTCTGAATTGGCTAAATGAGGAGAGGATTATCCAGAGGCTTGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGTTCACCCATCGCAAGAAGAAGATCGGCATTCAAATGCCTCACAATCACTTTGTGAAATTGTTCGCCTGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACCAGATGTTACAAGTTCAGAACAGTACAGAGCCAGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTGAGCAGCTTCTGTCAAATATTTTTCACAAGGAGAAGAATGAATCGGCCATAGTCAGTGCAATTCAGATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGACTTTGCTTGAGACTCGACGGCCAACGTTTGAAGGCCATATAGAAATCTGCCCCCCGGGCATGAGTCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCTTGTTCAGTTAACAAGAGTGTTCTTGAAGCCATCCGAGGAAGACTTGGATCTTTCCATGAACTCCTACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGAGCCACCCAAGAAAAGTGTGATGAAGACTACATGGGGTATATTGGACCCACCTGTGGGGAATACTCGATTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTCATTAGGTTGATATCCAGCCTGCTCCAAACCAATACCAGCAGCATAAATGGAGACCTGATGGAACTGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCATTGGCGTCATATTGGATATGTTCTTCAAGTACACATGGAATAACTTTCTACACACGCAAGTGGAAATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTGCTCTCATTCTGGCCAGTCCTTTTGAGAATGCAGAGAATGGCACAATTACTGATCAAGACTCCACTGGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAATTTGTTATTGAAGCATCTTTTTCAAAAGTGTCAGTTAATAGAGCGAATACTTGAAGCCTGGGACACAAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGAAACAGGCTGAAGGAGGACGACGGCATGGTTACATGGGACACCTTACGAGGATAGCTAACTGTATTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACAGCACTGACAAGGGTCCGAACAGTGCGTTAGTACAGCAGCTCATCAAAGATCTTCCCGATGAAGTCAGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCGGTGGGAGACGTTCTGCACGAACTCCTTAGGAGAGACGAACAAGAGGAACACGGTAGATCTAGTTACAACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGACACGGGTTTCTCACAGGATTCCTCTTTACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCAAATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGACCAAGACG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACATTGGCAATGTTTCTTTTGATCGGGTGTCAGATATCAACTTTACTCTCAATACAAATGAAAGTGGAAATATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCCTGTTTGAAGCATGTTGTAAAGAACGGATACAACAATTTGATGATGGCGGCTCTGATGAAGAGGATATCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAGGAGAAGCACATTGCATTTACTCCCGAATCCCAGAGGAGGTCCAGCTCTGGCAGTACGGACAGTGAAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTACAGACTCTGAAGAAGAAGATGGGGCCAAACAAGACCTGTTTGAGTCCAGCAGTGCAAACACAGAGGACAAA 1998
Query 1 ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGC 74
|||||||||||.||||.|||.|||||||.|||||||||.||||||||.||||||||||||||.|||||.|||||
Sbjct 1999 ATGGAGGTGGATCTGAATGAGCCACCCACCTGGTCAGCCAACTTTGACGTCCCAATGGAAACCACCCATGGTGC 2072
Query 75 TCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTT 148
|||.||.||.||.||||||||.|||||||||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct 2073 TCCCTTAGACTCCGTGGGATCCGATGTCTGGAGCACAGAGGAGCCAATGCCAACTAAAGAGACAGGCTGGGCTT 2146
Query 149 CTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACC 222
|.||||||||||||||.||.||||||||||||||.||.|||||||||||||||||.||.|||||||||||||||
Sbjct 2147 CCTTTTCAGAGTTCACATCCTCCCTGAGCACAAAGGAGTCTTTAAGGAGTAATTCGCCTGTGGAAATGGAAACC 2220
Query 223 AGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGG-CAGTGCAGCCAGAAGCGGCAGGCAGTG 295
|||||||||.||.|||||||..||||.||..||||.||||||.||| ||.| ||||||||.||..||||||||.
Sbjct 2221 AGCACTGAATCCGTGGACCCCTTGACACCTGGTGCAGCTGCCTTGGCCACT-CAGCCAGAGGCACCAGGCAGTA 2293
Query 296 TGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAAT 369
|||||||||||||||||||.||.||.||.||||||||.||.|||||||||||||||||||||||.|||||||||
Sbjct 2294 TGGCCATGGAAGCCAGCTCAGATGGGGAAGAGGATGCTGAGAGTACAGACAAGGTAACTGAGACCGTGATGAAT 2367
Query 370 GGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAA---------- 433
|||||||||||||||||.|||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct 2368 GGCGGCATGAAGGAAACACTCAGCCTCACTGTAGACGCCAAGACAGAGACTGCAGTCTTCAAAAGAGTGTTGAA 2441
Query 434 --------GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGA 499
|||||||||..|||||||||||||||||||||||||||||.|||||.|||||.|||...||.|||.
Sbjct 2442 GTCCTACCGTGAGGAAGAAAAACTGTCTACCTCTCAAGATGCTGCTTGCAAAGATGCAGAAGAGACCCCAGAGC 2515
Query 500 CTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCA 573
|.||||||||.||||||.|.||.|||..|.||||||||||.|||||||||||.|||||.|.|||.||||||...
Sbjct 2516 CAGCAGAGGCCAAGTGCACAGCTCCCCTGACTCCCAGCAGTAGTCCCGAGCAAAGGACCGACCAGCCAAGCATG 2589
Query 574 CCAGGTGACACTTCAGTGAATGGCCCTGTA 603
|||.|.|||.|.|||||.||||||||||||
Sbjct 2590 CCAAGCGACCCATCAGTTAATGGCCCTGTA 2619
