Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- XM_011248641.1
- Aligned Length:
- 2587
- Identities:
- 525
- Gaps:
- 1985
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACGCTTCTAGAGAGAGAAGATGTGACACTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCTAATGGATGAGGAGGATGTTCTACAGGAGTGTAAAGCACAGAACCGCAAGCTCATAGAATTTCTGTTAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCAGAATGTCTGGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGATATGGATGAGAAGATCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACAAGTATCCAAATATATCTTGTGAGTTGCTCACATCTGATGTCTCCCAGATGAATGATAGACTGGGGGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGTCCTTGCTAATGAAATTGTATAGCTTCCTCCTAAATGAGTCCCCCTTGAACCCACTACTCGCCAGTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTGAAAAAGAAGCGTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGTGGATCTCATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTATTGCTCAGGCTCTTGACATGTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGCCTCCACAACCCAGGCAAGATGTTCTGAATTGGCTAAATGAGGAGAGGATTATCCAGAGGCTTGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGTTCACCCATCGCAAGAAGAAGATCGGCATTCAAATGCCTCACAATCACTTTGTGAAATTGTTCGCCTGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACCAGATGTTACAAGTTCAGAACAGTACAGAGCCAGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTGAGCAGCTTCTGTCAAATATTTTTCACAAGGAGAAGAATGAATCGGCCATAGTCAGTGCAATTCAGATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGACTTTGCTTGAGACTCGACGGCCAACGTTTGAAGGCCATATAGAAATCTGCCCCCCGGGCATGAGTCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCTTGTTCAGTTAACAAGAGTGTTCTTGAAGCCATCCGAGGAAGACTTGGATCTTTCCATGAACTCCTACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGAGCCACCCAAGAAAAGTGTGATGAAGACTACATGGGGTATATTGGACCCACCTGTGGGGAATACTCGATTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTCATTAGGTTGATATCCAGCCTGCTCCAAACCAATACCAGCAGCATAAATGGAGACCTGATGGAACTGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCATTGGCGTCATATTGGATATGTTCTTCAAGTACACATGGAATAACTTTCTACACACGCAAGTGGAAATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTGCTCTCATTCTGGCCAGTCCTTTTGAGAATGCAGAGAATGGCACAATTACTGATCAAGACTCCACTGGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAATTTGTTATTGAAGCATCTTTTTCAAAAGTGTCAGTTAATAGAGCGAATACTTGAAGCCTGGGACACAAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGAAACAGGCTGAAGGAGGACGACGGCATGGTTACATGGGACACCTTACGAGGATAGCTAACTGTATTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACAGCACTGACAAGGGTCCGAACAGTGCGTTAGTACAGCAGCTCATCAAAGATCTTCCCGATGAAGTCAGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCGGTGGGAGACGTTCTGCACGAACTCCTTAGGAGAGACGAACAAGAGGAACACGGTAGATCTAGTTACAACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGACACGGGTTTCTCACAGGATTCCTCTTTACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCAATTTGGCTTCAACGATGAGAAGTTTGCAGACCAAGACGACATTGGCAATGTTTCTTTTGATCGGGTGTCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATCAACTTTACTCTCAATACAAATGAAAGTGGAAATATTGCCCTGTTTGAAGCATGTTGTAAAGAACGGATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAACAATTTGATGATGGCGGCTCTGATGAAGAGGATATCTGGGAGGAGAAGCACATTGCATTTACTCCCGAATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAGAGGAGGTCCAGCTCTGGCAGTACGGACAGTGAAGAAAGTACAGACTCTGAAGAAGAAGATGGGGCCAAAC 1924
Query 1 -----------------------------------------ATGGAGGTGGACCTGAGTGAACCACCCAACTGG 33
|||||||||||.||||.|||.|||||||.||||
Sbjct 1925 AAGACCTGTTTGAGTCCAGCAGTGCAAACACAGAGGACAAAATGGAGGTGGATCTGAATGAGCCACCCACCTGG 1998
Query 34 TCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAG 107
|||||.||||||||.||||||||||||||.|||||.||||||||.||.||.||.||||||||.|||||||||||
Sbjct 1999 TCAGCCAACTTTGACGTCCCAATGGAAACCACCCATGGTGCTCCCTTAGACTCCGTGGGATCCGATGTCTGGAG 2072
Query 108 CACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAA 181
||||||||||||.|||||||||||||||||.|||||||||||.||||||||||||||.||.|||||||||||||
Sbjct 2073 CACAGAGGAGCCAATGCCAACTAAAGAGACAGGCTGGGCTTCCTTTTCAGAGTTCACATCCTCCCTGAGCACAA 2146
Query 182 AAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGT 255
|.||.|||||||||||||||||.||.||||||||||||||||||||||||.||.|||||||..||||.||..||
Sbjct 2147 AGGAGTCTTTAAGGAGTAATTCGCCTGTGGAAATGGAAACCAGCACTGAATCCGTGGACCCCTTGACACCTGGT 2220
Query 256 GCGGCTGCCCTGG-CAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGG 328
||.||||||.||| ||.| ||||||||.||..||||||||.|||||||||||||||||||.||.||.||.||||
Sbjct 2221 GCAGCTGCCTTGGCCACT-CAGCCAGAGGCACCAGGCAGTATGGCCATGGAAGCCAGCTCAGATGGGGAAGAGG 2293
Query 329 ATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTA 402
||||.||.|||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||
Sbjct 2294 ATGCTGAGAGTACAGACAAGGTAACTGAGACCGTGATGAATGGCGGCATGAAGGAAACACTCAGCCTCACTGTA 2367
Query 403 GATGCCAAGACAGAGACTGCGGTCTTCAAAA------------------GTGAGGAAGGGAAACTGTCTACCTC 458
||.|||||||||||||||||.|||||||||| |||||||||..||||||||||||||
Sbjct 2368 GACGCCAAGACAGAGACTGCAGTCTTCAAAAGAGTGTTGAAGTCCTACCGTGAGGAAGAAAAACTGTCTACCTC 2441
Query 459 TCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTC 532
|||||||||||||||.|||||.|||||.|||...||.|||.|.||||||||.||||||.|.||.|||..|.|||
Sbjct 2442 TCAAGATGCTGCTTGCAAAGATGCAGAAGAGACCCCAGAGCCAGCAGAGGCCAAGTGCACAGCTCCCCTGACTC 2515
Query 533 CCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
|||||||.|||||||||||.|||||.|.|||.||||||...|||.|.|||.|.|||||.||||||||||||
Sbjct 2516 CCAGCAGTAGTCCCGAGCAAAGGACCGACCAGCCAAGCATGCCAAGCGACCCATCAGTTAATGGCCCTGTA 2586
