Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15896
- Subject:
- XR_001782600.1
- Aligned Length:
- 5370
- Identities:
- 525
- Gaps:
- 4768
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGGCCTGCTTGATACGTCCGCCATTTTGGGCGCTTCGCTGATGGTGTCGGTGAACCTTTTTCCCGCCTGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGACTAACTGCGGGTCTTGGGCGCCTCCAGGAACACTTCTGTTTCATACAATATCCTTTCATACTTCTGCTAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCTAATGTAATTTGGAAGATAGCTGTCACCAGGATAACCTGTAATGGGCAAGGAGCCACAGAGAAGAAAACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTTCTTTTAGTTTTAACCTTGCTTTCAAAGAACAGCATGTTTTGGAAATTTGATCTTCACTCATCATCCCACAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACACGCTTCTAGAGAGAGAAGATGTGACACTGAAGGAGCTAATGGATGAGGAGGATGTTCTACAGGAGTGTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCACAGAACCGCAAGCTCATAGAATTTCTGTTAAAAGCAGAATGTCTGGAAGATTTAGTCTCATTCATTATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGAACCACCTCAAGATATGGATGAGAAGATCCGATACAAGTATCCAAATATATCTTGTGAGTTGCTCACATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATGTCTCCCAGATGAATGATAGACTGGGGGAAGATGAGTCCTTGCTAATGAAATTGTATAGCTTCCTCCTAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGAGTCCCCCTTGAACCCACTACTCGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAACAGATTGTGGATTTCTTGAAAAAGAAGCGTGATTTTGTGGATCTCATTATAAAGCACATAGGAACTTCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATCATGGATTTATTGCTCAGGCTCTTGACATGTATTGAGCCTCCACAACCCAGGCAAGATGTTCTGAATTGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAAATGAGGAGAGGATTATCCAGAGGCTTGTGGAAATAGTTCACCCATCGCAAGAAGAAGATCGGCATTCAAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCTCACAATCACTTTGTGAAATTGTTCGCCTGAGCAGAGACCAGATGTTACAAGTTCAGAACAGTACAGAGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAATTATTGAGCAGCTTCTGTCAAATATTTTTCACAAGGAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAATGAATCGGCCATAGTCAGTGCAATTCAGATTTTGCTGACTTTGCTTGAGACTCGACGGCCAACGTTTGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCCATATAGAAATCTGCCCCCCGGGCATGAGTCATTCAGCTTGTTCAGTTAACAAGAGTGTTCTTGAAGCCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCGAGGAAGACTTGGATCTTTCCATGAACTCCTACTCGAGCCACCCAAGAAAAGTGTGATGAAGACTACATGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTATATTGGACCCACCTGTGGGGAATACTCGATTAAATGTCATTAGGTTGATATCCAGCCTGCTCCAAACCAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCAGCAGCATAAATGGAGACCTGATGGAACTGAACAGCATTGGCGTCATATTGGATATGTTCTTCAAGTACAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGGAATAACTTTCTACACACGCAAGTGGAAATTTGCATTGCTCTCATTCTGGCCAGTCCTTTTGAGAATGCAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAATGGCACAATTACTGATCAAGACTCCACTGGTGACAATTTGTTATTGAAGCATCTTTTTCAAAAGTGTCAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTAATAGAGCGAATACTTGAAGCCTGGGACACAAATGAGAAGAAACAGGCTGAAGGAGGACGACGGCATGGTTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATGGGACACCTTACGAGGATAGCTAACTGTATTGTGCACAGCACTGACAAGGGTCCGAACAGTGCGTTAGTAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCAGCTCATCAAAGATCTTCCCGATGAAGTCAGGGAGCGGTGGGAGACGTTCTGCACGAACTCCTTAGGAGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACGAACAAGAGGAACACGGTAGATCTAGTTACAACCTGCCATATTCATTCATCCAGTGATGATGAAATTGACTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TAAAGACACGGGTTTCTCACAGGATTCCTCTTTACAGCAAGCCTTTTCTGATTATCAGATGCAACAAATGACGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGACCAAGACGACATTGGCAATGTTTCTTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATCGGGTGTCAGATATCAACTTTACTCTCAATACAAATGAAAGTGGAAATATTGCCCTGTTTGAAGCATGTTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAAAGAACGGATACAACAATTTGATGATGGCGGCTCTGATGAAGAGGATATCTGGGAGGAGAAGCACATTGCAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTACTCCCGAATCCCAGAGGAGGTCCAGCTCTGGCAGTACGGACAGTGAAGAAAGTACAGACTCTGAAGAAGAA 2220
Query 1 ------------------------------------------------------ATGGAGGTGGACCTGAGTGA 20
|||||||||||.||||.|||
Sbjct 2221 GATGGGGCCAAACAAGACCTGTTTGAGTCCAGCAGTGCAAACACAGAGGACAAAATGGAGGTGGATCTGAATGA 2294
Query 21 ACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCTGTGGGAT 94
.|||||||.|||||||||.||||||||.||||||||||||||.|||||.||||||||.||.||.||.|||||||
Sbjct 2295 GCCACCCACCTGGTCAGCCAACTTTGACGTCCCAATGGAAACCACCCATGGTGCTCCCTTAGACTCCGTGGGAT 2368
Query 95 CTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTTCACGTCT 168
|.|||||||||||||||||||||||.|||||||||||||||||.|||||||||||.||||||||||||||.||.
Sbjct 2369 CCGATGTCTGGAGCACAGAGGAGCCAATGCCAACTAAAGAGACAGGCTGGGCTTCCTTTTCAGAGTTCACATCC 2442
Query 169 TCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCATGGACCC 242
||||||||||||||.||.|||||||||||||||||.||.||||||||||||||||||||||||.||.|||||||
Sbjct 2443 TCCCTGAGCACAAAGGAGTCTTTAAGGAGTAATTCGCCTGTGGAAATGGAAACCAGCACTGAATCCGTGGACCC 2516
Query 243 TCTGACTCCCAGTGCGGCTGCCCTGG-CAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGCCAGCTCT 315
..||||.||..||||.||||||.||| ||.| ||||||||.||..||||||||.|||||||||||||||||||.
Sbjct 2517 CTTGACACCTGGTGCAGCTGCCTTGGCCACT-CAGCCAGAGGCACCAGGCAGTATGGCCATGGAAGCCAGCTCA 2589
Query 316 GACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACGCT 389
||.||.||.||||||||.||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 2590 GATGGGGAAGAGGATGCTGAGAGTACAGACAAGGTAACTGAGACCGTGATGAATGGCGGCATGAAGGAAACACT 2663
Query 390 CAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAA------------------------------- 432
|||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 2664 CAGCCTCACTGTAGACGCCAAGACAGAGACTGCAGTCTTCAAAAGGTTCTCTTCACACCTCCACCGACTCTGCG 2737
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2738 GGGTGCCATGTGCAGTCGTGGACATGTTTCCCCAATTCCTCATTTCTAGGAGTGTTCTGAAACTCTTGTACGTT 2811
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2812 TCTTTTTCTGTTTTGCACACTTGGCCTCAGAGTGTTGAAGTCCTACCGGTATGTACGGTGACACGGGCCGCTCT 2885
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2886 TTCTCAGACACCAGCCACATTACATTGTCCCTCTCAGTTCCTACCTGCGTGTGGCCCTTTCCTCTCGTGGTTCC 2959
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2960 CCAGTCACTGTCTGCATTTCTGTGATCCTTCCACCCTGAGCATGCTCAGCCCCAGGGCTTGCCACCGTGGCAGT 3033
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3034 CATGACTTCAGAGCCATTTGCATGTGAGCTCATCCTCTGGCCCTGGTCGTGGTGCCTAGTATGTAATGCACCTA 3107
Query 433 ----------------AGTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGT 490
||||||||||..|||||||||||||||||||||||||||||.|||||.|||||.|||.
Sbjct 3108 ACTTCCTCTCTCCTGTAGTGAGGAAGAAAAACTGTCTACCTCTCAAGATGCTGCTTGCAAAGATGCAGAAGAGA 3181
Query 491 GTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAA 564
..||.|||.|.||||||||.||||||.|.||.|||..|.||||||||||.|||||||||||.|||||.|.|||.
Sbjct 3182 CCCCAGAGCCAGCAGAGGCCAAGTGCACAGCTCCCCTGACTCCCAGCAGTAGTCCCGAGCAAAGGACCGACCAG 3255
Query 565 CCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA----------------------------------- 603
||||||...|||.|.|||.|.|||||.||||||||||||
Sbjct 3256 CCAAGCATGCCAAGCGACCCATCAGTTAATGGCCCTGTATGATGAGTGACGTCCACTGCTGCTGACTGAGGACT 3329
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3330 GCAGGCCACCACCACCCAGGGGCTCTGGAGGGCTCACCCAGAGCTACTGAGCCACCACTACTGCACTCTGCAAG 3403
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3404 AGATCAGAACCAGCAGCCTTTCTGTTTCTAGATTCTAAGATGCTGTACAGAGAGACTCAGACATGTAAAACACT 3477
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3478 GCACATTGACAAATACCAAGAATTTTTTTGCGTATGTTTATATTGTATTGATCTAAATACTGGGTAGCCTGTGA 3551
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3552 CACCAGATCTTGCCGCCCATGTAATAATAGTAATGATACATAGTTCAGATGGTTGTAAGAATAGTTTTATAAAG 3625
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3626 TGACTACACAGATCTATTGTATTCGAAACATAACTATTTGACAATTATTAGTGTGACCAAAGTATTAGGCAGTT 3699
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3700 TTCATACATTTTCCACCTTGTACAAAATTCTGAATTCATTTTTCTTCCAGGTTGGCACGGAGCTGTCGATGGAA 3773
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3774 AAGCCCTCTGCGTGTTATATTTTGGTTGTTCTGACTTACAAAGTGATTTTGAATAAGAAATACTTGGTGTTTTT 3847
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3848 TTATAACCCACTTTCAATTGGTAACTGTTTTCTGTATTGTTTCAGGCGGATCAAATGCTTGAGTCTTGGTGGAG 3921
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3922 ATTAAGTATTTATTGCTACAACTTAGTTGATGAATTGCTGTTCTTGTAAAGCCATATGTTCTGTTAAGGTCTGG 3995
Query 604 -------------------------------------------------------------------------- 603
Sbjct 3996 TTTGCTCAGAGCGTTTCTTTCTGCAGGTGAAACACTAGAATATTGGAGTGTACATGGCTGTGGTTAGAATTTTA 4069
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4070 GGGGGGTTGGGGGGTGTTTGTTTTTTGTTTTGTTTTGGTAGTTCATCCGCCTTTTAACCCATTCACCAAAATGT 4143
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4144 CCCTTGTCAGCAAGTATCACTGATGGCTATTTCAGAGTGGTCTGCACCCACACTGCTCTGTGTCACAGAGGTGA 4217
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4218 GTCTGGAATGCTCATGTGGTGACAGGGTAGAGTGTGCCCATCACGCGGGCTGGCTGTAACAGAATCACAACCTG 4291
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4292 GCATCCAAGCATGTTTCTTGTTTTACTGTACCTTGTGAGGTTTTCACTTGTAAACCAGTGGATTTTAGAACTGG 4365
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4366 TTTGTGTGTATATAGTGATTATGGATACTAATTCAGTGTAATTTATAATTTTCTATGTCAGCGTAAACACATCC 4439
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4440 TAGCCTCCTCCAACAGCTGAAGCAATGGCCTGTGCACTGCCGCGGCATCGGGTGAAGAGCTCAGTCACCTCGCC 4513
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4514 TCTTGCACTTTTAGATGCAGATCAGTTTTTCATTCTATAATAGAAAATATTCACATATTTTTACATCATTTGTT 4587
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4588 TTTTCCTGACCAGTATTTAAAACCAAAAGGATATTCTGAAAAAATGGCCAACAAGTTTTTTAGAACCAGCATCC 4661
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4662 CAAGCAGTGTGCCTACATGACATCGCGTATGGAGATAGAGTCGAGTGTCCAATGCCTTACTCCTTACTCGCTTC 4735
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4736 TCACTGTACACAGTGCAAGGGACCACCTCAGGTGGCCGAGGCAGGCCTGGTCACCAGGCTCAGTGGGCAGCAGG 4809
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4810 AAGCCCTGGGACTGGTGGCGAGGGGCTCGGTGGCCTGTGCTTGCCCGCTCAGGACCCTTCAGTCACAGCTCCTT 4883
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4884 CAGAAGAGACTGCGTTCTCTGGAACCTGGTGCCACCAGAGGACAGGGCTCCTTCTGCTCGTCTCAGGGATGGTT 4957
Query 604 -------------------------------------------------------------------------- 603
Sbjct 4958 GACCTGCGTGGCCCAGGACCTCACATTGCTGGCGGATGGCATTCTCCTGTCTCACCTGGTTGACAAGCCTTGCT 5031
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5032 GACCCCAGCCAGGACTTGGCTCCTCCTAGTCAGCCCACACTGCCTCCTTGCTGTGGACTGGGCTGGCTTTTCTG 5105
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5106 TCCCACTGTCCACTGGGAAAGGAACGCTTGGGTACTGTTCTTGGGAAAGGACTTAGGCTTGCTTGTCATAAGGA 5179
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5180 GAGGCTGTGAGGGTGAAAGGGGACAAGGTGTGTTGGGTTGGAGGGTGCCAGCCAGGGCTTGTGATGAGTTCCTG 5253
Query 604 -------------------------------------------------------------------------- 603
Sbjct 5254 CTCCTTTTCATTTCTGTGTATTGGCCGAATGAATTGCAAGACTAACAGACGTCTACAGTACAGTACCTGTATCA 5327
Query 604 ------------------------------------------ 603
Sbjct 5328 CAAGTAATAACAAAATAAAGCCTGATGCTTTGTTTCTATAAA 5369
