Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15911
- Subject:
- XR_925630.2
- Aligned Length:
- 3831
- Identities:
- 1374
- Gaps:
- 2457
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGGCTCCGTTTGAAACATGGCGCGGGCTGGCCCTCGGCTGGTGCTGAGCGAGGAGGCGGTTCGGGCGAAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCTTAGGGCCTCACCGCGACCTGGCTGAGCTTCAGTCATTGTCTATTCCTGGAACTTACCAAGAGAAGATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCACCTGGGACATTCTCTGATGAGTTTAACAGGTCTGAAATCTTTGGATCTCTCGCGCAACTCCTTGGTTAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGGAGGGCATTCAGTACCTGACTGCATTGGAGAGTCTCAATCTCTACTACAACTGCATCTCCTCGTTGGCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTGTTTCGGCTCCACGCCTTAACCGAGCTCGTGGATGTGGACTTCCGGCTGAACCCCGTGGTGAAGGTTGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGACTACCGCCTTTTTGTTGTGCACCTGCTCCCCAAGCTCCAGCAGCTGGACGATCGCCCCGTGAGAGCAAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGCGGAAGGCTTCCCGACTGCATTTTGCATCAGAGGACTCACTCGACTCCAAAGAGAGCGTCCCAGCTTCTTT 518
Query 1 -------------------------------------------------------------------ATGGATG 7
|||||||
Sbjct 519 GAAAGAGGGCAGACCACACCACCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAGCCTGGTCATGGATG 592
Query 8 CGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTCGGCAGGCCTCCCGGGAGCACGAGC 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTCGGCAGGCCTCCCGGGAGCACGAGC 666
Query 82 TTCAGCCAGAAGGGGCGTGAGGCCGACTCTCGTGGTTCCCAAGAATCCAGACATCTGTTGAGCCCGCAGTTGGT 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCAGCCAGAAGGGGCGTGAGGCCGACTCTCGTGGTTCCCAAGAATCCAGACATCTGTTGAGCCCGCAGTTGGT 740
Query 156 ACAGTACCAGTGTGGGGACTCTGGGAAGCAGGGCCGTGAGACGAGGAGGAGCAGCTGCAGAGGGTGCTGTCTGG 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACAGTACCAGTGTGGGGACTCTGGGAAGCAGGGCCGTGAGACGAGGAGGAGCAGCTGCAGAGGGTGCTGTCTGG 814
Query 230 AGAAGATGCCTTGGAGCCAGCTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAGCCAGAGGCCTCCCGTGCC 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAAGATGCCTTGGAGCCAGCTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAGCCAGAGGCCTCCCGTGCC 888
Query 304 CCCAGGCCACACACGTACTTCACCCCACACCCAGACTCCATGGATACCGAGGACTCGGCCTCTTCTCAGAAGTT 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCCAGGCCACACACGTACTTCACCCCACACCCAGACTCCATGGATACCGAGGACTCGGCCTCTTCTCAGAAGTT 962
Query 378 GGATTTGTCAGGAGAAATGGTGCCTGGTCCCCTGCCAGCCCCCGGAAAGTGCAGGAAGCGAAGAATGCCTGTTG 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGATTTGTCAGGAGAAATGGTGCCTGGTCCCCTGCCAGCCCCCGGAAAGTGCAGGAAGCGAAGAATGCCTGTTG 1036
Query 452 GAAGATTCCAGACGTTTTCGGACCAGGAGGGTTTGGGCTGCCCGGAGAGAACTCATGGGTCCTCCGTGCCCAAG 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAAGATTCCAGACGTTTTCGGACCAGGAGGGTTTGGGCTGCCCGGAGAGAACTCATGGGTCCTCCGTGCCCAAG 1110
Query 526 GAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCTGAGGCCTCGGAGAC 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCTGAGGCCTCGGAGAC 1184
Query 600 TGAGGAGCAGAGGTCTCGGGGTGTGACCGACACCAGAGAGCCGTCTCCCGGGTCACACTCGGCTCTACCCGGGA 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGAGGAGCAGAGGTCTCGGGGTGTGACCGACACCAGAGAGCCGTCTCCCGGGTCACACTCGGCTCTACCCGGGA 1258
Query 674 AGAAGACGGCCCTGCAGGCGGCGCTCCTGGAGACGCTCTTGGACCTGGTGGACAGGAGCTGGGGCGGCTGCAGG 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAAGACGGCCCTGCAGGCGGCGCTCCTGGAGACGCTCTTGGACCTGGTGGACAGGAGCTGGGGCGGCTGCAGG 1332
Query 748 TCCCTGCACAGCAACGAGGCATTCCTTGCTCAGGCAAGACACATCTTGTCATCTGTTGAAGAATTCACAGCAGC 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCCCTGCACAGCAACGAGGCATTCCTTGCTCAGGCAAGACACATCTTGTCATCTGTTGAAGAATTCACAGCAGC 1406
Query 822 TCAGGACAGCTCTGCGATGGTGGGTGAAGATGTCGGCTCCCTGGCTCTGGAGAGTAAGTCCCTGCAAAGCCGCC 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCAGGACAGCTCTGCGATGGTGGGTGAAGATGTCGGCTCCCTGGCTCTGGAGAGTAAGTCCCTGCAAAGCCGCC 1480
Query 896 TTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGCGGAGCTGCACCACACACACAAGGAG 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGCGGAGCTGCACCACACACACAAGGAG 1554
Query 970 CTGGATGATTTGAGACAACATTTAGATAAATCTTTGGAAGAGAACAGTAGGTTAAAATCGCTTTTGTTGAGTAT 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTGGATGATTTGAGACAACATTTAGATAAATCTTTGGAAGAGAACAGTAGGTTAAAATCGCTTTTGTTGAGTAT 1628
Query 1044 GAAAAAGGAAGTGAAGAGTGCAGACACTGCAGCCACGTTAAATTTGCAGATCGCTGGACTTCAAACAAGTGTGA 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GAAAAAGGAAGTGAAGAGTGCAGACACTGCAGCCACGTTAAATTTGCAGATCGCTGGACTTCAAACAAGTGTGA 1702
Query 1118 AGAGGCTGTGTGGCGAGATTGTGGAACTGAAGCAGCACCTGGAGCACTACGACAAGATCCAGGAGCTCACGCAG 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGAGGCTGTGTGGCGAGATTGTGGAACTGAAGCAGCACCTGGAGCACTACGACAAGATCCAGGAGCTCACGCAG 1776
Query 1192 ATGCTGCAGGAGAGCCACAGCTCCCTGGTCAGCACCAATGAACACCTGCTGCAGGAGCTGAGCCAGGTGCGGGC 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATGCTGCAGGAGAGCCACAGCTCCCTGGTCAGCACCAATGAACACCTGCTGCAGGAGCTGAGCCAGGTGCGGGC 1850
Query 1266 GCAGCACAGAGCCGAGGTGGAGCAGATGCACTGGAGCTACCAGGAGCTCAAGAAGACCATGGCCCTGTTTCCAC 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCAGCACAGAGCCGAGGTGGAGCAGATGCACTGGAGCTACCAGGAGCTCAAGAAGACCATGGCCCTGTTTCCAC 1924
Query 1340 ACAGCAGCGCCAGCCATGGAGGCTGCCAGGCCTGC--------------------------------------- 1374
|||||||||||||||||||||||||||||||||||
Sbjct 1925 ACAGCAGCGCCAGCCATGGAGGCTGCCAGGCCTGCTGACTCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCC 1998
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 1999 TGGTTTACTAGAAATTCCCAACTGTTCCAAAGTGGTGGTACCCGCAGGCCCGACTGCTAGTTGTGTATGACCAC 2072
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2073 GTCTGCCGGTCCATGTTTTCAGCACCCATTGCCTGAAGTGTTAGCACCTTCACTCCGCTTCTTCTATCAATAAT 2146
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2147 TCGCCTCAAGAATGGATGACTTTTATCACTTTTTCTGCAGTGATGGAGATGACCATGATTTTTATCATTTAATA 2220
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2221 TATTGATGTGTTTAACGACCATAATTTGCTTTTGTTAAAAATAAACCTTGAATTTCTGAGATAAGTCCAACTTA 2294
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2295 ATAATTATGGATTTTCTTTTACATACATATTGTTATATTTGGTTTGTTAATATTTTGTTTAGCATTTTGTGGCC 2368
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2369 CAGCTATACTACCTAGCACCTGTGTTTGGGCCCTGATTTCCTCGTCTGTACAATGGGGAAATAGTGGCTTCCTC 2442
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2443 ACAGGATTGTTGTGAAGGTGAAATGAGTTAGTATGAATAAGACTCTCGGGCAGCATCTGGTGCGTCCTGAGCAC 2516
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2517 TGGGTAGCTGCGTGCTCTAGTACAGTGGTTAGTATCTCTCTTCACGGGTGACAGCCACTTACGATTTTCCTTTG 2590
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2591 TAATGCTGTTCTTGAAAGGATTCGCATCTTTACACCACCGTAAAATGAGCTAGGTTGTGTATTCTTTCTCCATT 2664
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2665 CTCTAGGAGAATTTACTTAAGATTATAATTATTTCTTCCATGGATGTTTGATGGAACTTGCTGGTGAAGTCACT 2738
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2739 TGTGCCTGGAACTTTCTTTGTCAGGAGGTTTGACTACTGATCCAGTATAACTCAGTGTTCCAGGATGTGGCAGA 2812
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2813 ACCGTTCACACAGACCATCCTTATGTCCCCCCTGCCTTTACGCTGCATATCCCTGAGTTGGGCTGGGGCCGTGT 2886
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2887 GACTACTGAGCAACAGCCTGTGTGTGGGACTGAGGTGAGTCATTTCAGGGCCAGAGCAGCGGGAGCTGGTGCGT 2960
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2961 CACTGTGATAGCTTCCCTGCCAGTGACCTGGGCAGCTGCATCACAGGATTAGGAAGTCTGTTTGTCTTCTGTTA 3034
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3035 GAAGAGATCTCTTGTTATTCCTGAAGTTGGACGTTGTGTGAGTAATACATTTTGTGTGTCCAGCCACTGAAGTG 3108
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3109 TTAGGGGTTTTCTTTTGTAGCTGGCAGTGACTTCCCCTAAGTCACAGGGCTGAGCAGGCTTTCCATTTCTTTTC 3182
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3183 GAGTTAGTTTTTGTAAGTTATGTGTCTCTAAGAATTGGTCCATATTGTCTTAATTTTCCATTTTGGGGGGTATA 3256
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3257 ACACACATAATTTGAATGGCTTCAACATTTGAAGTTGTGTGTGTCCCTGTGGCAGAGATGTAGGGACAGTTGTG 3330
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3331 TCCCTTCAAGCGAGACCTTGCCATCCAGGGGCAGGGAGTACAGGGGTAGAGACCATCTCCAGCCACCATGCTGT 3404
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3405 CAGGCTGTGCCTGGGCTCTGGAGCTGAGGACACACTCATCCAGGCAGCTGCAGCCAGTGTCCAAGCAGGCAGGG 3478
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3479 CCTGGGCCTAATGCGAACCACAGGGAGCTCCCTAGCAGGTCATCTCCAGAGCCTCCCTGAGGCCTCCCGGCCTC 3552
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3553 CTCCCCTTGCTGCTGTTCAGGGGCATTCCTCACCAGTGAGCCTCTTGTGATACAAAGGCCACCTCAGCATCTGC 3626
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3627 CTCCCGGGGACTCAGCCCATTCTTGGCCATTCTTCATATTCGTTATTTGAACTTTCTCTTCAGTCCTTTCAAAG 3700
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3701 AAACACCCTTTGCCTCCATTTTCTTTTCAATTTCTGATCTGATCTATCATTAGCCATGCTGAAATTACAAATAA 3774
Query 1375 --------------------------------------------------------- 1374
Sbjct 3775 ATATGGGTTAAAATATTATTTTATCAATTTCCCTGTTCTGTGTTTCTTTCTCTTGTT 3831
