Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15920
- Subject:
- NM_001161800.1
- Aligned Length:
- 1444
- Identities:
- 371
- Gaps:
- 1037
Alignment
Query 1 ------------------------------------------------------------------------AT 2
|.
Sbjct 1 ATGGCCACCTCCGGCGTGGAAAAGAGTAGCAAGAAGAAAACTGAGAAGAAACTTGCGGCTCGCGAAGAAGCCAA 74
Query 3 GCTG--GGAGGGACTGATTGCAGAACCTTCTTG-ACAAGCCACAT----AAATCTAAAGAAAACGTTGTGTGAC 69
|||| ||.|||..|.||.| .|.||.|| ||| |||| || |.|||.|||..||||||||
Sbjct 75 GCTGCTGGCGGGGTTCATGG-----GCGTCATGAACA----ACATGAGGAA----ACAGAGAACACTGTGTGAC 135
Query 70 GTGATCCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTGCAGCCAGTCATTTTTTTAA 143
||||||||||..|||||||||||||||||.||.|||||.||.|||||.||.||||||||||||||.||.|||||
Sbjct 136 GTGATCCTCACTGTCCAGGAAAGAAAGATCCCCGCTCACCGCGTTGTCCTGGCTGCAGCCAGTCACTTCTTTAA 209
Query 144 CTTAATGTTCACAACTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATATTA 217
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 210 CTTAATGTTCACAACTAACATGCTTGAATCTAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATATTA 283
Query 218 TTGAACAACTGGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAACAATGTTCAGTCTTTGTTGGAT 291
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 284 TTGAACAACTGGTGGAATTTGCTTATACTGCTAGAATTTCTGTGAATAGCAACAATGTTCAGTCTTTGTTAGAT 357
Query 292 GCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAAGTTGATGCTTC 365
||||||||.||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GCAGCAAATCAGTACCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAAGTTGATGCTTC 431
Query 366 AAATTGTCTTGG-AGAA--------GCAGA----------------------AAA-----AGTTGATCAGAGCC 403
|||||||||||| |.|| ||||| ||| ||.|||| |.|
Sbjct 432 AAATTGTCTTGGTATAAGTGTGCTTGCAGAGTGTCTGGACTGTCCTGAACTGAAAGCTACAGCTGAT----GAC 501
Query 404 TTC---CAGAGTGTGGTATGCTTTTCACTGTG------------------------------------------ 432
||| || |..||.||||||||.|
Sbjct 502 TTCATTCA--------TCAGCATTTCACTGAGGTTTACAAAACAGATGAATTCCTGCAGCTTGATGTCAAGCGA 567
Query 433 -------------------------------------------------------------------------- 432
Sbjct 568 GTGACACATCTTCTCAGCCAGGACACCCTGACTGTGAGAGCAGAGGACCAGGTTTATGACGCTGCCGTGAGGTG 641
Query 433 -------------------------------------------------------------------------- 432
Sbjct 642 GTTGAAATATGATGAGCCTAACCGCCAGCCATTCATGGTTGATATCCTTGCTAAAGTCAGGTTTCCTCTTATAT 715
Query 433 -------------------------------------------------------------------------- 432
Sbjct 716 CGAAGAATTTCCTAAGTAAAACAGTACAAGCTGAACCACTTATTCAAGATAATCCTGAATGCCTTAAAATGGTG 789
Query 433 -------------------------------------------------------------------------- 432
Sbjct 790 ATAAGTGGAATGAGGTACCATCTGCTGTCTCCTGAGGATCGAGAAGAACTTGCAGGTGGCACACGGCCTAGAAG 863
Query 433 -------------------------------------------------------------------------- 432
Sbjct 864 AAAGAAACATGATTACCGCATAGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATATTTTAACCCAAAGG 937
Query 433 -------------------------------------------------------------------------- 432
Sbjct 938 ATTACAGTTGGACAGACATTCGCTGCCCCTTTGAAAAACGAAGAGATGCAGCATGTGTGTTTTGGGACAATGTA 1011
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1012 GTATACATTTTGGGAGGTTCTCAGCTTTTCCCCATAAAGCGAATGGATTGCTACAATGTTGTAAAGGATAGCTG 1085
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1086 GTATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCCTTGCTGCCTGTGCAGCAGAAGGCAAAATTTATACAT 1159
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1160 CTGGAGGTTCAGAAGTAGGAAACTCGGCCCTGTATTTGTTTGAATGCTATGATACAAGGACCGAGAGTTGGCAC 1233
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1234 ACGAAGCCCAGCATGCTGACTCAGCGCTGCAGCCATGGGATGGTGGAGGCCAATGGCCTCATCTATGTTTGTGG 1307
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1308 TGGAAGCTTAGGAAACAATGTTTCTGGGAGAGTGCTTAGTTCCTGTGAAGTGTATGATCCTGCCACAGAAACGT 1381
Query 433 -------------------------------------- 432
Sbjct 1382 GGTCTGGACAATGTGGAATATTACGATATCAAGTTAAA 1419
