Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15923
• Subject: XM_011542904.2
• Aligned Length: 1037
• Identities: 691
• Gaps: 307

Alignment

Query    1  AT------GGATCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCC  68
            ||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTACAGGATCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCC  74

Query   69  CATGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGG  142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CATGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGG  148

Query  143  TTGTCCTCATCAAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAG  216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTGTCCTCATCAAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAG  222

Query  217  CAGCTGTGTGACGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGG  290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGCTGTGTGACGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGG  296

Query  291  GCCTGCAGTGGCAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGT  364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTGCAGTGGCAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGT  370

Query  365  TCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAA  438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAA  444

Query  439  CCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGA  512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGA  518

Query  513  GCTTCGCATGCGGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGA  586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTTCGCATGCGGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGA  592

Query  587  AGAGCCTGA-------AGACCCCCCGTG--TGGTGGGTGGGGAGGAGGC----CTCTG-----TGGAT-TCTTG  641
            | ..||.||       |||..|||.|.|  ||      ||||...||||    |.|||     ||.|| |.|.|
Sbjct  593  A-TTCCAGAGAAAGGGAGATTCCCAGGGACTG------GGGGCCCAGGCTAAACACTGAAAAATGCATCTGTAG  659

Query  642  GCCTTGGCAGGTCAGCATCCAGTACGACAAACAGCACGTCTGTGGAGGGAGCATCCTG----GACCCCCACTGG  711
            ||               ||.||.|.|| |||...||.||||||            |||    |.||.||||   
Sbjct  660  GC---------------TCAAGGAGGA-AAAGCCCATGTCTGT------------CTGTCTTGCCCACCAC---  702

Query  712  GTC-CTCACGGCAGCC--CACTGCTTCAGGAAACATACCGATGTGTTCAACTGGAAGGTGCGGGCAGGCTCAGA  782
             || |||.|.|||.||  ||||||..|||||.|.|.|.|          |||                 |.|.|
Sbjct  703  -TCTCTCCCAGCACCCAGCACTGCCCCAGGACAGAGAGC----------ACT-----------------TGACA  748

Query  783  CAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAGATCATCATCATTGAATTCAACCCCATGTACCCCAAAG  856
            |||..|||..||.|                                                            
Sbjct  749  CAAGTTGGTTAGAT------------------------------------------------------------  762

Query  857  ACAATGACATCGCCCTCATGAAGCTGCAGTTCCCACTCACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCC  930
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query  931  TTCTTTGATGAGGAGCTCACTCCAGCCACCCCACTCTGGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGG  1004
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query 1005  G  1005
             
Sbjct  763  -  762