Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15939
- Subject:
- NM_001127360.1
- Aligned Length:
- 1365
- Identities:
- 632
- Gaps:
- 723
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAATCTGTTGAACAGAGAGAAATCAAGGGGCTAAGGAATAAACCAAAGAAAACAGCACATGTGAAACCAGACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAGGTCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCACTTCTAGCCCAC 370
Query 1 -----------------------------------------ATGCTGCTCCTGGGAACTGTGCATTGCCAGATT 33
|||||||||||||||||||||||||||||||||
Sbjct 371 ACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTGCATTGCCAGATT 444
Query 34 GTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCA 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCA 518
Query 108 TTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCACG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCACG 592
Query 182 GTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATCA 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATCA 666
Query 256 AAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGAC 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGAC 740
Query 330 TGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCCT 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCCT 814
Query 404 GGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGTC 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGTC 888
Query 478 TCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTCG 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTCG 962
Query 552 GAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTACTAGTTGCAGCT 625
|||||||||||||||||||||||||||||||||||||||||||| ||.| |||| |||
Sbjct 963 GAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGG-------TATA-----TACT--TTG----- 1017
Query 626 CTCGCTGTTCAAGT---TCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGATGTGTTATGG 696
|..|.|||| |.||.|| |.||| |.|.||||
Sbjct 1018 -----TCCTTAAGTGTATACATAC-----------------------GTATC------------TATTTTAT-- 1049
Query 697 GAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCATCAGATTAA 770
.||||||
Sbjct 1050 ------ATGTTAC------------------------------------------------------------- 1056
Query 771 TCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATAGTTCCCACC 844
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 845 CAGGATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATGTCTGTACTTGAA 918
Sbjct 1057 -------------------------------------------------------------------------- 1056
Query 919 ATCAGTGGAATGATAATGAACAGAGTGAGTTTT 951
Sbjct 1057 --------------------------------- 1056