Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15939
- Subject:
- NM_001366085.2
- Aligned Length:
- 1638
- Identities:
- 731
- Gaps:
- 906
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAATCTGTTGAACAGAGAGAAATCAAGGGGCTAAGGAATAAACCAAAGAAAACAGCACATGTGAAACCAGACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAGGTCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCACTTCTAGCCCAC 370
Query 1 -----------------------------------------ATGCTGCTCCTGGGAACTGTGCATTGCCAGATT 33
|||||||||||||||||||||||||||||||||
Sbjct 371 ACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTGCATTGCCAGATT 444
Query 34 GTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCA 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCA 518
Query 108 TTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCACG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCACG 592
Query 182 GTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATCA 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATCA 666
Query 256 AAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGAC 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGAC 740
Query 330 TGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCCT 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCCT 814
Query 404 GGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGTC 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGTC 888
Query 478 TCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTCG 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTCG 962
Query 552 GAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTACTAGTTGCAGCT 625
|||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATG--------------------------------- 1003
Query 626 CTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGATGTGTTATGGGAA 699
Sbjct 1004 -------------------------------------------------------------------------- 1003
Query 700 GACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCATCAGATTAATCC 773
Sbjct 1004 -------------------------------------------------------------------------- 1003
Query 774 ATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATAGTTCCCACCCAG 847
||||||||||||||||||||||||||||||||||||
Sbjct 1004 --------------------------------------AGAGTCATTTGCCCTGGCTCCATAGTTCCCACCCAG 1039
Query 848 GATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATGTCTGTACTTGAAATC 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1040 GATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATGTCTGTACTTGAAATC 1113
Query 922 AGTGGAATGATAATGAACAGAGTG----------------------------AGTTTT---------------- 951
|||||||||||||||||||||||| ||.|||
Sbjct 1114 AGTGGAATGATAATGAACAGAGTGAACAGCCATATACCAGGAATAGGATACCAGATTTTTGGAAATGCAGTCTC 1187
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1188 TCTCATACTGGGTTTAACTCCATTTGTTTTCCGACTTTCTCAAGCTACAGACTTGGAACAACTCACAGCACATT 1261
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1262 CTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTCATAGTTCTTTCTATGGTTATAATAAGT 1335
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1336 TTTGTGGTTCGCGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACAGGT 1409
Query 952 ---------- 951
Sbjct 1410 GGGTATAATG 1419
