Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15941
- Subject:
- NM_172992.3
- Aligned Length:
- 2245
- Identities:
- 928
- Gaps:
- 1193
Alignment
Query 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
||||||||||.|||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 1 ATGGCGTCCAGAGTCACAGATGCTATAGTCTGGTATCAGAAGAAGATTGGAGCCTATGATCAACAAATATGGGA 74
Query 75 AAAATCTGTTGAACAGAGAGAAATCAAGGGGCTAAGGAATAAACCAAAGAAAACAGCACATGTGAAACCAGACC 148
|||.|||||||||||.||||||||||||||..||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAGTCTGTTGAACAAAGAGAAATCAAGGGCTTAAGGAATAAACCAAAGAAAACAGCACATGTGAAACCAGACC 148
Query 149 TCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACC 222
||||.||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 149 TCATCGATGTTGATCTTGTGAGAGGGTCTGCATTTGCTAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACA 222
Query 223 A-GAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAGGTCA 295
| ||||||| ||||||||||||||.||||||||.||.||||.|||.|||||||||||||||||.||.|..||||
Sbjct 223 AGGAAAGGG-ATTGTTCGAGTTGTCTTTTTCCCTTTCTTCTCCCGCTGGTGGTTACAAGTAACGTCCAGAGTCA 295
Query 296 TCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCACTTCTAGCCCA 369
||||.|.||||||||||||.||.||||||||.||||||||||||||||||||||||||.|||.||.||||||||
Sbjct 296 TCTTCTCCTGGCTTCTTGTTCTCTATCTTCTCCAAGTTGCTGCAATAGTATTATTCTGTTCCGCTCCTAGCCCA 369
Query 370 CACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTGCATTGCCAGAT 443
||.|||||||||||.||.||.|||||||||||.|||||||||||||||||..|||||||.||||||||||||||
Sbjct 370 CATAGCATACCTCTAACTGAAGTGATTGGGCCAATATGGCTGATGCTGCTTTTGGGAACCGTGCATTGCCAGAT 443
Query 444 TGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCC 517
||||||.||||||||||||||.|||||.|||.|.|||||.||||||.|||||||||||||||||||||||||||
Sbjct 444 TGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGAAATTAAGAAAAGCAGCCC 517
Query 518 ATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCAC 591
||||||||||.||.||||||||.||.||||||||.|||||||||||||||||.||||||||.||.||||.||||
Sbjct 518 ATTTGGAAGTCCACAGGGAAGGGGACGGTTCTAGCACCACAGATAACACACAGGAGGGAGCGGTGCAGAGCCAC 591
Query 592 GGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATC 665
||..||.||.||.||.||||.||||||||||||||||||||.||.||||.||||||||||||.||||||||.||
Sbjct 592 GGCGCAGGCGCCCCTTACAGTGTTGGCACTGTCTTCAGAGACCTTTGGCTTGCTGCTTTCTTCTTATCAGGGTC 665
Query 666 AAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGA 739
||||||.||||||||||||||||||||.|||||.||.|||||||||||||||||.|||||.||||||||||.||
Sbjct 666 AAAGAAGGCAAAGAATTCAATTGATAAGTCAACCGAGACTGACAATGGCTATGTGTCCCTCGATGGGAAGAGGA 739
Query 740 CTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCC 813
||||.||||||.||||.||||||..|||..|||||||.|||||||||||||||.||.||||||||||..|||||
Sbjct 740 CTGTAAAAAGCAGTGAGGATGGAGCACAGTACCATGAGCCTCAGTGTGAAACTGTTGGACCAGAAGACGCAGCC 813
Query 814 TGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGT 887
|||..||||.||||.|..||||.||.||||..|||||||||||||||.|..|||||||||||||||||||||||
Sbjct 814 TGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATGTCTCTGATGAAGT 887
Query 888 CTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTC 961
.|||||||||||.|||||.||||||||||||.||||.|||.|||||||||||||.|||||||||.|.|.|||||
Sbjct 888 ATCCAGTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGGACAGAACTTCTGAAAGCGGTCTTC 961
Query 962 GGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGG-------TATA-----TACT--TTG---- 1017
|.|||||||||.|||||||||||||.||.|||||..|.||||||| ||.| |||| |||
Sbjct 962 GAAATAGAAAGCCACACCATTATAAAAAGCATTATGCAAATGAGGATGCCCCTAAATCGGGTACTAGTTGCAGC 1035
Query 1018 ------TCCTTAAGTGTATACATAC-------------------------------------ATATCTATTTT- 1047
|..|.|||| |.||.|| |.||.||||.|
Sbjct 1036 TCTCGCTGTTCAAGT---TCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACCGAAGATGTATTATG 1106
Query 1048 -----ATATGTTAC------------------------------------------------------------ 1056
|..||||||
Sbjct 1107 GGAAGACTTGTTACACTGTGCGGAATGCCGCTCATCTTGTACCAGTGAGACAGATGTGGGAAACCCTCAGATAA 1180
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1181 ATCCATGTGGGAAGAAAGAATATAGAGACGACCCTTTTCATCAGAGTCATTTGCCCTGGCTTCATAGTTCCCAC 1254
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1255 CCAGGATTAGAAAAAATCAGTGCTATAGTGTGGGAAGGTAACGACTGTAAGAAAGCAGACATGTCTGTACTTGA 1328
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1329 AATCAGTGGGATGATAATGAACAGAGTGAACAACCATGTCCCAGGCATAGGATACCAGGTATTTGGAAATGCCA 1402
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1403 TCTCTCTAATCCTGGGCTTGACCCCATTTGTTTTCCGACTGTCACAAGCAACAGACTTGGAGCAGCTCACAGCC 1476
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1477 CATTCTGCGTCAGAACTTTATGTGATTGCGTTTGGCTCTAACGAAGATGTCATGGTTCTTTCTATGGTCCTGAT 1550
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1551 AAGTTTTGTGGTTCGAGTCTCTCTTGTGTGGATCTTCTTTTTTTTGCTGTGTGTAGCAGAAAGAACATATAAGC 1624
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1625 AACGATTACTCTTTGCAAAACTCTTTGGACACTTGACGTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCCGCAT 1698
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1699 TTCCGGTTGAAGAAAGTACAGAATATAAAAATGTGGCTGTCTCTGCGTTCCTATCTTAAGCGCCGAGGCCCTCA 1772
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1773 GCGATCTGTGGATGTCATTGTCTCATCGGCCTTCTTACTGACAATCTCAGTTGTGTTTATCTGCTGTGCACAGC 1846
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1847 TGCTCCACGTGCACGAGATCTTCCTTGACTGTCACTATAACTGGGAGCTGGTGATCTGGTGCATCTCCTTAACG 1920
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1921 CTGTTCCTCCTGAGGTTCGTTACTCTTGGATCAGAAACCAGCAAGAAATACAGCAATACCTCAATCCTACTTAC 1994
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1995 GGAACAGATAAACCTCTACTTGAAAATGGAGAAGAAACCTAACAAAAAGGAGGAGCTGACCCTTGTGAATAATG 2068
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 2069 TGTTAAAGCTGGCTACGAAACTGCTGAAGGAATTGGACAGTCCCTTTAGGTTGTATGGACTTACAATGAATCCG 2142
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 2143 CTGCTGTATAACATCACCCAGGTTGTCATCCTTTCGGCTGTTTCCGGTGTCATCAGTGACTTGCTTGGATTTAA 2216
Query 1057 ------------------------- 1056
Sbjct 2217 TTTAAAGCTGTGGAAGATCAAATCG 2241
