Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15941
- Subject:
- XM_006535801.1
- Aligned Length:
- 2027
- Identities:
- 929
- Gaps:
- 976
Alignment
Query 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
||||||||||.|||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 1 ATGGCGTCCAGAGTCACAGATGCTATAGTCTGGTATCAGAAGAAGATTGGAGCCTATGATCAACAAATATGGGA 74
Query 75 AAAATCTGTTGAACAGAGAGAAATCAAGGGGCTAAGGAATAAACCAAAGAAAACAGCACATGTGAAACCAGACC 148
|||.|||||||||||.||||||||||||||..||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAGTCTGTTGAACAAAGAGAAATCAAGGGCTTAAGGAATAAACCAAAGAAAACAGCACATGTGAAACCAGACC 148
Query 149 TCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACC 222
||||.||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 149 TCATCGATGTTGATCTTGTGAGAGGGTCTGCATTTGCTAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACA 222
Query 223 A-GAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAGGTCA 295
| ||||||| ||||||||||||||.||||||||.||.||||.|||.|||||||||||||||||.||.|..||||
Sbjct 223 AGGAAAGGG-ATTGTTCGAGTTGTCTTTTTCCCTTTCTTCTCCCGCTGGTGGTTACAAGTAACGTCCAGAGTCA 295
Query 296 TCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCACTTCTAGCCCA 369
||||.|.||||||||||||.||.||||||||.||||||||||||||||||||||||||.|||.||.||||||||
Sbjct 296 TCTTCTCCTGGCTTCTTGTTCTCTATCTTCTCCAAGTTGCTGCAATAGTATTATTCTGTTCCGCTCCTAGCCCA 369
Query 370 CACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTGCATTGCCAGAT 443
||.|||||||||||.||.||.|||||||||||.|||||||||||||||||..|||||||.||||||||||||||
Sbjct 370 CATAGCATACCTCTAACTGAAGTGATTGGGCCAATATGGCTGATGCTGCTTTTGGGAACCGTGCATTGCCAGAT 443
Query 444 TGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCC 517
||||||.||||||||||||||.|||||.|||.|.|||||.||||||.|||||||||||||||||||||||||||
Sbjct 444 TGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGAAATTAAGAAAAGCAGCCC 517
Query 518 ATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCAC 591
||||||||||.||.||||||||.||.||||||||.|||||||||||||||||.||||||||.||.||||.||||
Sbjct 518 ATTTGGAAGTCCACAGGGAAGGGGACGGTTCTAGCACCACAGATAACACACAGGAGGGAGCGGTGCAGAGCCAC 591
Query 592 GGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATC 665
||..||.||.||.||.||||.||||||||||||||||||||.||.||||.||||||||||||.||||||||.||
Sbjct 592 GGCGCAGGCGCCCCTTACAGTGTTGGCACTGTCTTCAGAGACCTTTGGCTTGCTGCTTTCTTCTTATCAGGGTC 665
Query 666 AAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGA 739
||||||.||||||||||||||||||||.|||||.||.|||||||||||||||||.|||||.||||||||||.||
Sbjct 666 AAAGAAGGCAAAGAATTCAATTGATAAGTCAACCGAGACTGACAATGGCTATGTGTCCCTCGATGGGAAGAGGA 739
Query 740 CTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCC 813
||||.||||||.||||.||||||..|||..|||||||.|||||||||||||||.||.||||||||||..|||||
Sbjct 740 CTGTAAAAAGCAGTGAGGATGGAGCACAGTACCATGAGCCTCAGTGTGAAACTGTTGGACCAGAAGACGCAGCC 813
Query 814 TGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGT 887
|||..||||.||||.|..||||.||.||||..|||||||||||||||.|..|||||||||||||||||||||||
Sbjct 814 TGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATGTCTCTGATGAAGT 887
Query 888 CTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTC 961
.|||||||||||.|||||.||||||||||||.||||.|||.|||||||||||||.|||||||||.|.|.|||||
Sbjct 888 ATCCAGTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGGACAGAACTTCTGAAAGCGGTCTTC 961
Query 962 GGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAG-GT-ATATACTTTG----------TCC--- 1020
|.|||||||||.|||||||||||||.||.|||||..|.|||||| || ||.|.|..|| |||
Sbjct 962 GAAATAGAAAGCCACACCATTATAAAAAGCATTATGCAAATGAGAGTCATTTGCCCTGGCTTCATAGTTCCCAC 1035
Query 1021 ------TTA---------AGTG-TATA----------------------------CATACATATC--TATTTTA 1048
||| |||| |||| ||.||||.|| ||.||.|
Sbjct 1036 CCAGGATTAGAAAAAATCAGTGCTATAGTGTGGGAAGGTAACGACTGTAAGAAAGCAGACATGTCTGTACTTGA 1109
Query 1049 TATGTTAC------------------------------------------------------------------ 1056
.|| |
Sbjct 1110 AAT----CAGTGGGATGATAATGAACAGAGTGAACAACCATGTCCCAGGCATAGGATACCAGGTATTTGGAAAT 1179
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1180 GCCATCTCTCTAATCCTGGGCTTGACCCCATTTGTTTTCCGACTGTCACAAGCAACAGACTTGGAGCAGCTCAC 1253
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1254 AGCCCATTCTGCGTCAGAACTTTATGTGATTGCGTTTGGCTCTAACGAAGATGTCATGGTTCTTTCTATGGTCC 1327
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1328 TGATAAGTTTTGTGGTTCGAGTCTCTCTTGTGTGGATCTTCTTTTTTTTGCTGTGTGTAGCAGAAAGAACATAT 1401
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1402 AAGCAACGATTACTCTTTGCAAAACTCTTTGGACACTTGACGTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCC 1475
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1476 GCATTTCCGGTTGAAGAAAGTACAGAATATAAAAATGTGGCTGTCTCTGCGTTCCTATCTTAAGCGCCGAGGCC 1549
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1550 CTCAGCGATCTGTGGATGTCATTGTCTCATCGGCCTTCTTACTGACAATCTCAGTTGTGTTTATCTGCTGTGCA 1623
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1624 CAGCTGCTCCACGTGCACGAGATCTTCCTTGACTGTCACTATAACTGGGAGCTGGTGATCTGGTGCATCTCCTT 1697
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1698 AACGCTGTTCCTCCTGAGGTTCGTTACTCTTGGATCAGAAACCAGCAAGAAATACAGCAATACCTCAATCCTAC 1771
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1772 TTACGGAACAGATAAACCTCTACTTGAAAATGGAGAAGAAACCTAACAAAAAGGAGGAGCTGACCCTTGTGAAT 1845
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1846 AATGTGTTAAAGCTGGCTACGAAACTGCTGAAGGAATTGGACAGTCCCTTTAGGTTGTATGGACTTACAATGAA 1919
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1920 TCCGCTGCTGTATAACATCACCCAGGTTGTCATCCTTTCGGCTGTTTCCGGTGTCATCAGTGACTTGCTTGGAT 1993
Query 1057 ----------------------------- 1056
Sbjct 1994 TTAATTTAAAGCTGTGGAAGATCAAATCG 2022
