Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15963
- Subject:
- NR_135643.1
- Aligned Length:
- 2246
- Identities:
- 806
- Gaps:
- 1412
Alignment
Query 1 ATGTCCAACCCCAGCGCCCCACCACCATATGAAGACCGCAACCCCCTGTACCCAGGCCCTC-CGCCCCCTGGGG 73
.|||||..| ||.| |||
Sbjct 1 ----------------------------------------------------GAGGCCGGCGCGAC-----GGG 17
Query 74 GCTATGGGC----AGCCATCTGTCCTGCCAGGAGGGTATCCTGCCTACCCTGGCTACCCGCA-GCCTGGCTACG 142
|| .|||| |||| ||.||| |||..||.| |||.||| ||| ||||.| |.||.||.||
Sbjct 18 GC--GGGGCGCGGAGCC------CCAGCC--GAGCCTAGC---CCTGCCC-GGC--CCCGGAGGACTTGCAAC- 74
Query 143 GTCACCCTGCTGGCTACCCACAGCCCATGCCCCCCACCCACCCGATGCCCATGAACTAC---GGCCCAGGCCAT 213
||.|..||.|||.| .||.|.||...|| ||||..| ||||||||||||
Sbjct 75 ---------------ACTCCGAGGCCAGG-----AACGCTCCGTCTG-----GAACGGCGCAGGCCCAGGCCAT 123
Query 214 GGCTATGATGGGGAGGAGAGAGCGGTGAGTGATAGCTTCGGGCCTGGAGAGTGGGATGACCGGAAAGTGCGACA 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 124 GGCTATGATGGGGAGGAGAGAGCGGTGAGTGATAGCTTCGGGCCTGGAGAGTGGGATGACCGGAAAGTGCGACA 197
Query 288 CACTTTTATCCGAAAGGTTTACTCCATCATCTCCGTGCAGCTGCTCATCACTGTGGCCATCATTGCTATCTTCA 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 198 CACTTTTATCCGAAAGGTTTACTCCATCATCTCCGTGCAGCTGCTCATCACTGTGGCCATCATTGCTATCTTCA 271
Query 362 CCTTTGTGGAACCTGTCAGCGCCTTTGTGAGGAGAAATGTGGCTGTCTACTACGTGTCCTATGCTGTCTTCGTT 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 272 CCTTTGTGGAACCTGTCAGCGCCTTTGTGAGGAGAAATGTGGCTGTCTACTACGTGTCCTATGCTGTCTTCGTT 345
Query 436 GTCACCTACCTGATCCTTGCCTGCTGCCAGGGACCCAGACGCCGTTTCCCATGGAACATCATTCTGCTGACCCT 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 GTCACCTACCTGATCCTTGCCTGCTGCCAGGGACCCAGACGCCGTTTCCCATGGAACATCATTCTGCTGACCCT 419
Query 510 TTTTACTTTTGCCATGGGCTTCATGACGGGCACCATTTCCAGTATGTACCAAACCAAAGCCGTCATCATTGCAA 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TTTTACTTTTGCCATGGGCTTCATGACGGGCACCATTTCCAGTATGTACCAAACCAAAGCCGTCATCATTGCAA 493
Query 584 TGATCATCACTGCGGTGGTATCCATTTCAGTCACCATCTTCTGCTTTCAGACCAAGGTGGACTTCACCTCGTGC 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 TGATCATCACTGCGGTGGTATCCATTTCAGTCACCATCTTCTGCTTTCAGACCAAGGTGGACTTCACCTCGTGC 567
Query 658 ACAGGCCTCTTCTGTGTCCTGGGAATTGTGCTCCTGGTGACTGGGATTGTCACTAGCATTGTGCTCTACTTCCA 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 ACAGGCCTCTTCTGTGTCCTGGGAATTGTGCTCCTGGTGACTGGGATTGTCACTAGCATTGTGCTCTACTTCCA 641
Query 732 ATACGTTTACTGGCTCCACATGCTCTATGCTGCTCTGGGGGCCATTTGTTTCACCCTGTTCCTGGCTTACGACA 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 642 ATACGTTTACTGGCTCCACATGCTCTATGCTGCTCTGGGGGCCATTTGTTTCACCCTGTTCCTGGCTTACGACA 715
Query 806 CACAGCTGGTCCTGGGGAACCGGAAGCACACCATCAGCCCGGAGGACTACATCACTGGCGCCCTGCAGATTTAC 879
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 716 CACAGCTGGTCCTGGGGAACCGGAAGCACACCATCAGCCCCGAGGACTACATCACTGGCGCCCTGCAGATTTAC 789
Query 880 ACAGACATCATCTACATCTTCACCTTTGTGCTGCAGCTGATGGGGGATCGCAAT-------------------- 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 790 ACAGACATCATCTACATCTTCACCTTTGTGCTGCAGCTGATGGGGGATCGCAATTAAGGAGCAAGCCCCCATTT 863
Query 934 -------------------------------------------------------------------------- 933
Sbjct 864 TCACCCGATCCTGGGCTCTCCCTTCCAAGCTAGAGGGCTGGGCCCTATGACTGTGGTCTGGGCTTTAGGCCCCT 937
Query 934 -------------------------------------------------------------------------- 933
Sbjct 938 TTCCTTCCCCTTGAGTAACATGCCCAGTTTCCTTTCTGTCCTGGAGACAGGTGGCCTCTCTGGCTATGGATGTG 1011
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1012 TGGGTACTTGGTGGGGACGGAGGAGCTAGGGACTAACTGTTGCTCTTGGTGGGCTTGGCAGGGACTAGGCTGAA 1085
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1086 GATGTGTCTTCTCCCCGCCACCTACTGTATGACACCACATTCTTCCTAACAGCTGGGGTTGTGAGGAATATGAA 1159
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1160 AAGAGCCTATTCGATAGCTAGAAGGGAATATGAAAGGTAGAAGTGACTTCAAGGTCACGAGGTTCCCCTCCCAC 1233
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1234 CTCTGTCACAGGCTTCTTGACTACGTAGTTGGAGCTATTTCTTCCCCCAGCAAAGCCAGAGAGCTTTGTCCCCG 1307
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1308 GCCTCCTGGACACATAGGCCATTATCCTGTATTCCTTTGGCTTGGCATCTTTTAGCTCAGGAAGGTAGAAGAGA 1381
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1382 TCTGTGCCCATGGGTCTCCTTGCTTCAATCCCTTCTTGTTTCAGTGACATATGTATTGTTTATCTGGGTTAGGG 1455
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1456 ATGGGGGACAGATAATAGAACGAGCAAAGTAACCTATACAGGCCAGCATGGAACAGCATCTCCCCTGGGCTTGC 1529
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1530 TCCTGGCTTGTGACGCTATAAGACAGAGCAGGCCACATGTGGCCATCTGCTCCCCATTCTTGAAAGCTGCTGGG 1603
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1604 GCCTCCTTGCAGGCTTCTGGATCTCTGGTCAGAGTGAACTCTTGCTTCCTGTATTCAGGCAGCTCAGAGCAGAA 1677
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1678 AGTAAGGGGCAGAGTCATACGTGTGGCCAGGAAGTAGCCAGGGTGAAGAGAGACTCGGTGCGGGCAGGGAGAAT 1751
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1752 GCCTGGGGGTCCCTCACCTGGCTAGGGAGATACCGAAGCCTACTGTGGTACTGAAGACTTCTGGGTTCTTTCCT 1825
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1826 TCTGCTAACCCAGGGAGGGTCCTAAGAGGAAGGTGACTTCTCTCTGTTTGTCTTAAGTTGCACTGGGGGATTTC 1899
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1900 TGACTTGAGGCCCATCTCTCCAGCCAGCCACTGCCTTCTTTGTAATATTAAGTGCCTTGAGCTGGAATGGGGAA 1973
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1974 GGGGGACAAGGGTCAGTCTGTCGGGTGGGGGCAGAAATCAAATCAGCCCAAGGATATAGTTAGGATTAATTACT 2047
Query 934 -------------------------------------------------------------------------- 933
Sbjct 2048 TAATAGAGAAATCCTAACTATATCACACAAAGGGATACAACTATAAATGTAATAAAGTTTATGTCTAGAAGTTA 2121
Query 934 -------------------------- 933
Sbjct 2122 AAACCCTGAAAAAAAAAAAAAAAAAA 2147
