Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15966
- Subject:
- XR_245152.2
- Aligned Length:
- 2304
- Identities:
- 1251
- Gaps:
- 1053
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGTAGAAGGCGGTGGCTGAGGCGGTTCCGGAGGTTCTAGTGTCGGAGTTGGGTGCAGGCAGGTGCCATGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCTTGAGGCACACTGAGGGGACGCGGGGCTGGGCCATGGCCGGCGCTCGGGCCGCCGCCGCCGCTGCCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGGGTCCTCGGCCTCTTCAGGCAACCAGCCGCCTCAGGAGCTGGGGCTTGGGGAGCTGCTGGAGGAGTTCTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGACTCAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAAGGTTGAGCGCATTGAGAAGAGATGTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGCTGTTTGGCCGAGACTACTGTTTCAGCGTGATTCCAAACACGAATGGGGATATCTGTGGCCACTATCCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCACATCGTGTTCCTGGAGTATGAGAGTTCTGAGAAGGAGAAAGACACGTTTGAGAGTACCGTACAGGTGAGC 444
Query 1 ------------------------------ATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTT 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGTTGCAAGACCTCATCCACCGCAGCAAGATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTT 518
Query 45 CAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACT 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACT 592
Query 119 ATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGA 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGA 666
Query 193 AGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATA 740
Query 267 CATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACA 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACA 814
Query 341 AAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAA 888
Query 415 GATCGGGATTACATGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCC 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GATCGGGATTACATGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCC 962
Query 489 CGACTTCCTGACTCACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGACTTCCTGACTCACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAA 1036
Query 563 ACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGC 1110
Query 637 TGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCT 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCT 1184
Query 711 GAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGC 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGC 1258
Query 785 TCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCT 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCT 1332
Query 859 CTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAG 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAG 1406
Query 933 ACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCA 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCA 1480
Query 1007 CTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTG---------- 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTGATCAGTGGAC 1554
Query 1071 -------------------------------------------------------------------------- 1070
Sbjct 1555 CATCCCCTGCCCGGATCCTCTCTCTCCACAGACTATGGCAGCTGGCAGATGGTAACGGGCTGTGGCAGTATTCA 1628
Query 1071 ------------------------------------------------------------------------GC 1072
||
Sbjct 1629 GGAGCGGGCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTCCCGGATGAGCTCCCTAACAGTTGTCTGC 1702
Query 1073 TTGCAGCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACA 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTGCAGCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACA 1776
Query 1147 GTGGGGCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGT 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTGGGGCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGT 1850
Query 1221 TGGACTCCGGAGCATCAGCAGCAATGCCTTG------------------------------------------- 1251
|||||||||||||||||||||||||||||||
Sbjct 1851 TGGACTCCGGAGCATCAGCAGCAATGCCTTGTGAAGAAGCCAGCCCATGACATTTTCCTGCTCCTCTCTCAGCT 1924
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 1925 GAGCCCTTAGCAGAGAATCAAAGCCATGCCTGGCCGAAGGGGTACTTCCAGGTCAGGGGAAATTTCAGTCCCCC 1998
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 1999 ATCTCCATCATGAACATGGCAGCCCCAAAGCTGAGCAAGGCCAAAGACAGGGTTTTCCAACCCCCAGCCTCTTG 2072
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2073 ACTGGTGACCACCACCCCTTCTTGTCACTGTCTCCCACCCACCCCATCTTTGCTGGGATTCCCATCAACTCTCA 2146
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2147 GAACTGTGTGGGGTTTCCCTGGGGCCTTGTGGAAGCCATGACTTCACAAAGACCCTACCTGTCAGTTCTTGTTT 2220
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2221 CTGGGGAGGAGGGATCACCTGCACTGAGAATGAGGCAGTTTGACACAGATCACAAAATAAAATCAAAGTCTTTT 2294
Query 1252 ---------- 1251
Sbjct 2295 TGAATAGCCA 2304
