Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15987
- Subject:
- XM_011513135.2
- Aligned Length:
- 2521
- Identities:
- 460
- Gaps:
- 2039
Alignment
Query 1 ATGCATCAACTGTTCAGACTGGTTTTGGGACAAAAAGATCTTTCACGAGCTGGGGACCTCTTCTCCTTAGATGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGAGATTGAAGACAGCCTTACAGAAGCTTTGGAGCAAATTAAGATAATTAGCTCATCTTCAGATTACCAAA 148
|| .||||||||||
Sbjct 1 ---------------------------------------------------------AT----GGATTACCAAA 13
Query 149 CCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCATCAGAGAGACCGAGTCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14 CCAATAACAATGACCAGGCAGTAGTTGAAATCTGTATCACAAGAATCACAACAGCCATCAGAGAGACCGAGTCC 87
Query 223 ATTGAAAAGCATGCAAAGGCCCTTGTGGGGCTCTGGGACTCCTGCTTGGAACATAACCTGAGACCCTTTGGGAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88 ATTGAAAAGCATGCAAAGGCCCTTGTGGGGCTCTGGGACTCCTGCTTGGAACATAACCTGAGACCCTTTGGGAA 161
Query 297 AGACGAAGACACTCCTCATGCAAAAATCGCATCTGATATCATGAGTTGCATTTTACAGAATTACAACCGACCCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162 AGACGAAGACACTCCTCATGCAAAAATCGCATCTGATATCATGAGTTGCATTTTACAGAATTACAACCGACCCC 235
Query 371 CAGTGATGGCATTAGCCATCCCCATTGCAGTGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAATATG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 CAGTGATGGCATTAGCCATCCCCATTGCAGTGAAATTCCTCCACAGAGGCAACAAGGAACTGTGCAGGAATATG 309
Query 445 TCTAACTACCTGTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 310 TCTAACTACCTGTCTCTGGCTGCAATTACCAAGGCAGATCTCCTGGCTGATCACACGGAAGTTATAGTAAAGAG 383
Query 519 CATACTCCAAGGTA---------TGGTGCGAAAGTTGAGCTTGGGGACATGTTTTGGGAGATATTTAAAAGTAT 583
|||||||||||||| ||.||.||..||| ||.||.|.|| || |.|||||.|
Sbjct 384 CATACTCCAAGGTAACACCATGTTGTTGAGAGTGTT----------ACCTGCTGTG-----TA-TGAAAAGCA- 440
Query 584 TTTCATCAAGCATTTA---------------------TGG--TTTGTG--------GGA--AGCAAGACCTAGA 624
.|.|||..||.||| ||| ||..|| ||| |||.||| |.|
Sbjct 441 --GCCTCAGCCAATTAATAGACACCTGACAGAACTCCTGGCCTTGATGTCTCAGCTGGAACAGCCAGA---ACA 509
Query 625 GTA----------------------TTAGAAGCAAAT------------------------------------- 639
||| .|||.||||||.
Sbjct 510 GTACCATCTACTACGGCTTTTGCATGTAGCAGCAAAGAAAAAACAACTCGAGGTAGTTCAGAAGTGTATTCCTT 583
Query 640 -------------------------------------------------------------------------- 639
Sbjct 584 TCCTAATTGGGCATTTGAAGGATTCAACCCATAATGACATCATCCTAAACATCCTCATAGAGATAGCAGTCTAT 657
Query 640 -------------------------------------------------------------------------- 639
Sbjct 658 GAGCCAGTGGCTTTGAACAGTTTTCTTCCAATGCTGAAAGAGATTGGTGAGAGATTCCCCTACCTCACTGGACA 731
Query 640 -------------------------------------------------------------------------- 639
Sbjct 732 GATGGCAAGGATTTATGGAGCTGTTGGGCATGTGGATGAAGAGAGAGCCAGGAGCTGCCTGACATACCTGGTGA 805
Query 640 -------------------------------------------------------------------------- 639
Sbjct 806 GCCAACTGGCCAACATGGAGCATTCGTTTCACCATATTCTCCTGCTGGAGATTAAAAGCATCACCGACACCTTC 879
Query 640 -------------------------------------------------------------------------- 639
Sbjct 880 TCCTCAATCTTGGGCCCTCAGAGCAGAGACATCTTCCGCATGAGCAACAGCTTCACCGCCATTGCTAAACTCCT 953
Query 640 -------------------------------------------------------------------------- 639
Sbjct 954 TACCCGACAACTGGAAAATACCAAGGCTGGAAGTGGCAGGAGAAAAATCAGCACTGAAATTGAATTCCCTGAGA 1027
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1028 AACTGGAAGAAACCAAGCTCATAGTAACTGAAAATGAAGACCATGAAAAACTCCAAGTTAAAATCCAGGCTTTT 1101
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1102 GAAGACAAGATAAATGCAGGGAGCAATACCCCTGGCTCTATCAGAAGATATAGTCTGGGCCAAGTTTCTAAAGA 1175
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1176 AGAAAGAAAAAACATTAGATTTAACAGGTCAAAAAGTTTGGCTTTCCACACTATGCTCACAAAGGGTGTGGGTT 1249
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1250 CAGATGACGGCGAAGATGAAAACAGGGGAGACATACCAGCCAGCATCTCTCTTTCAGAAATAGACCCACTTGGC 1323
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1324 CAAGGAAATGACAAGCTGCCGTTTAAGACAGACACTGAGAGATCACAGCTGGGGGAGTCTTCAGTTTCATACCC 1397
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1398 AAATATTATACATATAGACTCAGAGAATTTGTCAGAAACTGTTAAAGAAAACTCCCAGGAAGAAACTCCAGAGA 1471
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1472 CAACTGCAAGTCCTATAGAATACCAAGATAAGCTCTACTTGCACTTAAAAAAAAACCTCAGCAAAGTGAAAGCA 1545
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1546 TATGCCATGGAAATTGGAAAGAAGATTCCAGTCCCTGATCAGTGTACCATTGAAGACACTGTGAGAAGTTGTGT 1619
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1620 AGCAAAGTTGTTCTTCACCTGCTCCCTGAAGGGTCATTACTGCCTATACAGTAAGTCCAGTTTTATTCTCATCA 1693
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1694 GCCAAGAACCTCAGCCATGGATCCAGATCATGTTTCTATTTCAGCAGAGCCTGTTTCCTGAACCCCTGTCCATT 1767
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1768 CAGAGTCATTCTGTGCAATTCCTCAGAGCTCTGTGGGAGAAGACCCAGGCAGGGGGTGCTCACAGCTTTGAAAC 1841
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1842 TGCCATGATGGAGTCCACGTTTCCACAGCAGAAGGATCTGGACCAGGTACAGCTCCATCTGGAAGAAGTGAGGT 1915
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1916 TCTTTGACGTGTTTGGCTTCAGTGAAACAGCAGGAGCATGGCAATGCTTCATGTGCAACAATCCTGAGAAAGCA 1989
Query 640 -------------------------------------------------------------------------- 639
Sbjct 1990 ACTGTTGTAAATCAAGATGGCCAGCCTCTCATAGAAGGAAAACTTAAAGAGAAGCAAGTCAGATGGAAGTTCAT 2063
Query 640 -------------------------------------------------------------------------- 639
Sbjct 2064 CAAAAGGTGGAAAACACGCTATTTTACACTGGCTGGAAATCAACTTCTGTTTCAAAAAGGAAAGTCTAAAGATG 2137
Query 640 -------------------------------------------------------------------------- 639
Sbjct 2138 ACCCTGACGACTGCCCAATAGAACTCAGCAAAGTACAGAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACCGC 2211
Query 640 -------------------------------------------------------------------------- 639
Sbjct 2212 TCTCTCCCCCGGGCTTTCGAAATCTTCACAGACAATAAAACCTATGTCTTTAAGGCCAAGGATGAGAAGAATGC 2285
Query 640 -------------------------------------------------------------------------- 639
Sbjct 2286 AGAAGAATGGCTCCAGTGCATCAACGTGGCAGTTGCCCAAGCCAAAGAAAGGGAAAGTAGAGAAGTAACCACAT 2359
Query 640 ----- 639
Sbjct 2360 ATCTG 2364
