Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15988
- Subject:
- XR_001781568.1
- Aligned Length:
- 2133
- Identities:
- 664
- Gaps:
- 1403
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCCAGACTACAGCTCCCGGCATGCCCTGCACCTGGTACTCGCCCGCGGCGTGCGGAGGGAAGGATGCAGACAA 74
Query 1 -----------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGCCACAGGCGGC 63
|||||||||||||||||||||||||||||.||||.||||||||||||||||.||...||||||
Sbjct 75 CGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCCCGGGGGCGGC 148
Query 64 TGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGAGCA 137
||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.||.|||||
Sbjct 149 TGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGTGTCGGGAGCA 222
Query 138 GAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGGGCCTACCTCA 211
||||||||||||||||||||||||.|||||.||||||||.||.||||||.||||||||||||||||||||||||
Sbjct 223 GAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGGGGCCTACCTCA 296
Query 212 TTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAAGGAC 285
|||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..|||||||||||||||||
Sbjct 297 TTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCTGGACAAGGAC 370
Query 286 ATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCATCAAAGACCG 359
|||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.||||||||||||.|
Sbjct 371 ATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATCATCAAAGACAG 444
Query 360 GATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAGTGCCAGGAGG 433
||||||.|||||.||||||||.||..|||||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 445 GATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCAGTGCCAAGAGG 518
Query 434 AGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTCC 507
||||||||||.||.|||||.|||||.|||||.||.|||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTCC 592
Query 508 TACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCACCCCAAACGG 581
||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||.|||||.||||
Sbjct 593 TACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGCTCCCCACACGG 666
Query 582 GCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGGAGGAGG 655
.||||||||.|||||||..|||||..|||||||||||||.|||||||||||||||||||.||.|| |||
Sbjct 667 CCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCGGC------AGG 734
Query 656 AGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAG----GTGCA-------- 717
|||||||||||||||||||||..|||||||||||||||||.|||||.|||||||||| || ||
Sbjct 735 AGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGATGCCCAGGAGAAAGCCCTGT-CATCTCAGGA 807
Query 718 ----GCCAACC----------CCCA------------------------------GGAGGATGAT--TGC---- 741
||.|||| |||| ||||| | |||
Sbjct 808 TCCCGCTAACCTTTTCTCCCTCCCACCACCGCCTCCTCCTCCTCCGCTTCCTGCTGGAGG----TCCTGCTTCA 877
Query 742 -------------------------------------------------------------------------- 741
Sbjct 878 TCTTCATCCACCTCCTCTTCCTCCTGGATCTCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGCCCAGGTTT 951
Query 742 -------------------------------------------------------------------------- 741
Sbjct 952 CCTCTCCGCCTGCTCCCGTCTCCACCCTGGGGCTGCCCTAGTCCCAGTCTCCCGCGCCCTCTCCCCAAGCCCCC 1025
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1026 TCGCCCTGCATCCCCAAGCATCCTGCCTGCCGCCTCCTTCGCCCCTTCCAGCCCCTCCTGCCTCCTGGCCTGGG 1099
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1100 GAGGAGGGGCGTGGCCGCATCTGCTCTTTGTCCTCCAACCCAGCAGAGCACCTCTGAGGCTGGCCTTGGCCACA 1173
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1174 GGCCCCACTCTTCCCACTTGCCTCCTCACGTTTCCTCCTTGCAGGTCCCTGTCCGCACCCTCCCAGACCCAAGC 1247
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1248 CTGAGCTTGCAGTGAGAGCTCCTCGGCCCCGCGCCCGCCCCCAGAGCTGCCGCCCCTGCTATTACAAGCCAGAG 1321
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1322 GCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCA 1395
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1396 CGGGGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCCTGCATCTGCCGGGCTGA 1469
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1470 GACTCACTCCTGCCTTGGGGCCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTC 1543
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1544 TCCAGGCAGAGACGCCAAGGCCAAACTGTGGCACTACCTACCCATATCTTCCAGGCCCTTTTGTCCCCTCACCT 1617
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1618 GGGCGCCCTTGCTGCATGGCGGATACACTCCCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTCTAT 1691
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1692 GGCACCATAGGGTCATCCTCTCCTCCCACCTACCTCACAGGGTTGTTGTGAGAATCAGGGAGGATCATGGGGTT 1765
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1766 CCTGGGAGCCCTGAGTGTGTTGGGGCTACAATCATTACCTTCTTAGGGGAAGGGCTCTAGCCCCGCCCCTGTAT 1839
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1840 GGGACACTATGGCCTCAGATACTGGTGGGGGACAATGTGAGGACTTTGCCAGGCAGGAAGGAAGTTACAGGCTT 1913
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1914 AACAGCACCTTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGA 1987
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1988 TGGGGAAGGGGACAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACCCCGGGATGGGCACATGTCT 2061
Query 742 ------------------------------------------------------------- 741
Sbjct 2062 GTCAGTTGTGTCCCACCCGCCATGAAATAAAGCTGAACAAACAGGCTTGGCCTGGCTGCCA 2122
