Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_16061
Subject:
NM_001290765.1
Aligned Length:
1132
Identities:
953
Gaps:
50

Alignment

Query    1  ATGCCTGGATGTCCCTGCCCTGGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTCACTGCCCTTGCCCTGGA  74
            |||||||||||||||||||||||||||||.|||||.||||.||||||||||||||||||||.||||||||||||
Sbjct    1  ATGCCTGGATGTCCCTGCCCTGGCTGTGGTATGGCAGGCCAAAGGCTCCTCTTCCTCACTGTCCTTGCCCTGGA  74

Query   75  GCTCTTGGGAAGGGCTGGGGGTTCCCAGCCGGCCCTCCGGAGCCGGGGGACTGCGACGGCCTGTCGCCTGGACA  148
            ||||.|||.|||||||||.|||||||||||.|||||||||||||.||||.||||..|.||||||||||||||.|
Sbjct   75  GCTCCTGGAAAGGGCTGGAGGTTCCCAGCCAGCCCTCCGGAGCCTGGGGGCTGCAGCTGCCTGTCGCCTGGATA  148

Query  149  ACAAGGAAAGCGAGTCCTGGGGGGCTCTGCTGAGCGGAGAGCGGCTGGACACCTGGATCTGCTCCCTCCTGGGT  222
            |.||.|||||||||||||||||||||.|||||||.||.|||||.||||||||||||||||||||||||.||||.
Sbjct  149  ATAAAGAAAGCGAGTCCTGGGGGGCTTTGCTGAGTGGGGAGCGACTGGACACCTGGATCTGCTCCCTCTTGGGC  222

Query  223  TCCCTCATGGTGGGGCTCAGTGGGGTCTTCCCGTTGCTTGTCATTCCCCTAGAGATGGGGACCATGCTGCGCTC  296
            ||.||||||||.||||||||||||||.|||||.|||||.|||||||||||.||||||||||||.||.|.|..||
Sbjct  223  TCTCTCATGGTTGGGCTCAGTGGGGTTTTCCCCTTGCTGGTCATTCCCCTGGAGATGGGGACCCTGTTACAGTC  296

Query  297  AGAAGCTGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGGGACTCTTGGGCAATGTGTTTCTGC  370
            ||||||.||.||||||||.||||.|||||||||||||||.|||.|.||.||||||.|||||||.||||||||||
Sbjct  297  AGAAGCCGGAGCCTGGCGACTGAGGCAGCTGCTCAGCTTTGCCTTAGGTGGACTCCTGGGCAACGTGTTTCTGC  370

Query  371  ATCTGCTGCCCGAAGCCTGGGCCTACACGTG---------CAGCGCCA-------------GCC----------  412
            |.||||||||.||.||.|||||||||||.||         |..|||||             |||          
Sbjct  371  ACCTGCTGCCGGAGGCGTGGGCCTACACCTGTAACATCACCCCCGCCACTGGCTTGGCATGGCCTGTTAGTGCT  444

Query  413  -------CTGGTGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTGGGTCATTGCTGGCATCCT  479
                   |.||||||||.||||||||.|||||||..||||||||.||||||||.||||||||.||||||.||||
Sbjct  445  CCCCCTGCAGGTGGTGAAGGGCAGAGTCTGCAGCGACAGCAACAACTGGGGCTATGGGTCATCGCTGGCTTCCT  518

Query  480  GACCTTCCTGGCGTTGGAGAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCAGCCAGGCCCCCAACAAAGACC  553
            ||||||||||||||||||||||||||||||..|||||||||||||   ..|||||||||||||||.||||||||
Sbjct  519  GACCTTCCTGGCGTTGGAGAAGATGTTCCTCAACAGCAAGGAGGA---CCCCAGCCAGGCCCCCAGCAAAGACC  589

Query  554  CCACTGCTGCTGCCGCCGCACTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTCGGTGCC  627
            ||||||||      |||||.|||||||||||||||||||||||||||||||||||||||||||||||..|.|||
Sbjct  590  CCACTGCT------GCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTGAGAGCC  657

Query  628  GTGGTCCGGAGCATCAAAGTCAGCGGCTACCTCAACCTGCTGGCCAACACCATCGATAACTTCACCCACGGGCT  701
            ||||||||||.|.||||||||||.|||||.|||||||||||.|||||||||||.||.||||||||.||.|||||
Sbjct  658  GTGGTCCGGAACCTCAAAGTCAGTGGCTATCTCAACCTGCTTGCCAACACCATAGACAACTTCACTCATGGGCT  731

Query  702  GGCTGTGGCTGCCAGCTTCCTTGTGAGCAAGAAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGA  775
            ||||||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||||
Sbjct  732  GGCTGTGGCTGCCAGCTTCCTTGTGAGCAAAAAGATCGGGCTTCTGACCACCATGGCCATCCTCCTGCATGAGA  805

Query  776  TCCCCCATGAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCAAGCTGCAA  849
            ||||||||||||||||.||||||||.||||||||||||||.||||||||||||||||..|||||.|||||.||.
Sbjct  806  TCCCCCATGAGGTGGGTGACTTTGCTATCCTGCTCCGGGCTGGCTTTGACCGATGGACGGCAGCTAAGCTACAG  879

Query  850  CTCTCAACAGCGCTGGGGGGCCTACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGTAGAGGA  923
            .|.||.|||||.|||||.|||||.|||||.||..||||.|||||||||||.|||||||||||.|||||||||||
Sbjct  880  TTTTCTACAGCCCTGGGAGGCCTTCTGGGGGCCTGCTTTGCCATCTGTACACAGTCCCCCAAAGGAGTAGAGGA  953

Query  924  GACGGCAGCCTGGGTCCTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACC  997
            |||||..|.||||.||||||||||||||||.||.|||||||||||.||||||.|||||||.|||.|.|||||||
Sbjct  954  GACGGTGGTCTGGATCCTGCCCTTCACCTCGGGAGGCTTTCTCTATATCGCCCTGGTGAATGTGTTACCTGACC  1027

Query  998  TCTTGGAAGAAGAGGACCCGTGGCGCTCCCTGCAGCAGCTGCTTCTGCTCTG-TGCGGGCATCGTGGTAATGGT  1070
            |||||||||||||.||||||||||.|||||||||.|||.||||.|||||||| |.|||...|| ||||.|||||
Sbjct 1028  TCTTGGAAGAAGACGACCCGTGGCACTCCCTGCAACAGGTGCTGCTGCTCTGCTCCGGTGTTC-TGGTGATGGT  1100

Query 1071  GCTGTTCTCGCTCTTCGTGGAT  1092
            ||||.|.||..|.||.||.||.
Sbjct 1101  GCTGCTTTCATTGTTTGTTGAA  1122

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