Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16077
- Subject:
- NR_136580.1
- Aligned Length:
- 3080
- Identities:
- 416
- Gaps:
- 2663
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGTCTGAACCCGCCCCGGGGGTGCCAAGGTGCGTCTCCAGTCTGACGCGACCGCCTGGGGCGGAGTCAGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACGTGCCACCTGCAGTGCTGGCTAGGGCTTTTTATTTACTAGGGAGCAGTTTCCCCGCGCGACAGTTCGGGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACACACACACACACACACACACTTTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACACACAAACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGTTAACCTCAGCATCGTGGGGCGAAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGCCTGCGCTGCCGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTGGCACCTAACCCAGCAGACCGCTCACCCCATCGGCTGGAATGCTTGCTGATTCCTCTGCACACTTCTAAGG 444
Query 1 ----------------------------ATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCC 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGAGAACCTGAGGAACCCAGCTGGAAAATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCC 518
Query 47 AGAGGCTCTGCCACTCCGAATCTCACAATGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAGGCTCTGCCACTCCGAATCTCACAATGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATC 592
Query 121 CTCTGCGACATCACCCTGATTGCTGAGGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGTGA 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTGCGACATCACCCTGATTGCTGAGGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGTGA 666
Query 195 CTATTTCCGGGCAATGTTCAGTCTTTGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCA 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTATTTCCGGGCAATGTTCAGTCTTTGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCA 740
Query 269 GCCTTGGCTTAAAGCAGGCTCTGGAGTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGAT 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCCTTGGCTTAAAGCAGGCTCTGGAGTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGAT 814
Query 343 GTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGG---- 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGGAATT 888
Query 413 -----------------TGGAG---------------------------------------------------- 417
||||.
Sbjct 889 AAATAGCTTTAATTACTTGGATCTGTACAGACTTGCTGACCTCTTTAACCTCACTTTGTTGGAGAAGGCAGTGA 962
Query 418 -------------------------------------------------------------------------- 417
Sbjct 963 TCGATTTCTTAGTGAAACATCTCTCTGAACTCCTGAAGAGCCGCCCAGAAGAAGTTCTAACGCTTCCCTATTGC 1036
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1037 CTGCTTCAGGAGGTGCTGAAGAGCGACCGCCTGACCTCCCTGAGTGAAGAGCAGATCTGGCAGGTGGAGTAACT 1110
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1111 AATACGGCACAATATCAGAACAGGCTAATGGTGTATGAACCTAACCAGAATAAGTGGATAAGCCGTAGCCCCAT 1184
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1185 GCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAAGGAAGCTTTATGTTCTTGGAGGCAATGACCTAG 1258
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1259 ACTACAATAATGACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGT 1332
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1333 AATTTCAACCTGCTGACTGGCCAAAATGAATCTGGAGTTGCTGTCCATAATGGGAGAATATATTTAGTTGGTGG 1406
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1407 ATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAAGCAGAGAAGGCAAAGAAGAAG 1480
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1481 TATTCTATGGGCCTACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACA 1554
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1555 TGCCCTAACCTTCAAACTCTTCAAGTGCCTCATCACAGGATTGGCACCATCTGAAAAGCCAAGCCATCATGAAC 1628
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1629 AGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGACTCAGTGCTCCATGCTTCCTTGTCTTGC 1702
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1703 TTTATAGGTCTTATATTCGGATAAATTTAAGCAAAAAATGAACAATTTTCTAAAATACGTTATTGAAAACTCGT 1776
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1777 CACCCTTCTCAGTGTATGTCAACATTCAATATGTATGACTTTTATTGTGGTATAGCTTAGTGCCAATTTAAGGT 1850
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1851 ATATTGTGTTCCATGGGTCTTTAGAGCATTCTTTGTACACTTTTTCTAATCAGCACTGTCTTAAGACAACATAA 1924
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1925 CACTGTTAGTAAGGCAATTTATTGGACACAATGGCATCGATGATCTTAAAAATATATATATTCTGTACTTAATC 1998
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1999 CCTTTATTATTTAAAGCCGGGCTTGTAATTTTTCTTTTTAAAATTTAACATTATGCAGCCCTGCTCAGTAGAGA 2072
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2073 CTCACTCAGCATTATGACATCATAAATTTTTAAATGCCATATTTTATTCAAGGTGATACGAATAATAATAGACA 2146
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2147 TACACTGGAACAGCAGTTGTTGAAATACCCAGATTTTTCACCTTGGTTACTCTGACCTTGGGTCAGAACCTAAC 2220
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2221 TTTACAGTGCTTCAGTTTTCCCACCTTTTAAGGAGGATAATTACTGATTTCCACGTTAATTTAAAAGAACATTA 2294
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2295 TGAGGATTAGGCGAACACTTTGTAATACTTTGCCCAAGAAAAAGAAAAATGTTGTTACTGAAATTATAAGGTAT 2368
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2369 TTTATTGTCTTTAGAACCTTGTAATTGAACAGGGAGATTATTTTTGAAGTTTAAAAATTACTAGATAGAATTTG 2442
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2443 GAAACATGTTGTGGAATAAATGATTCTAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTC 2516
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2517 AAAATCTAAACTTGTACAGGTATCTAAACTTGCCTCAAGTAACTCTCAGATGTCTTATTTAAAATCATTTAGTG 2590
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2591 AAAAATGACATTTAAAGCTAAAAAATAATTTAGTTGTACTAATTATGGTACCATAAAGTGCTTTGACATAAATT 2664
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2665 TGAACCTAGAATTGGCAGTTCTAATAAAAGTTTTTCCACTTTGTTAAAGGTTATGTCAATCTTGAGTGCTTGTG 2738
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2739 GAATTCTTCACCACCAATACATATTTTATTACTATCTCTTTTAATAATGCATAGGAATTCTTTTTTAGACTAGT 2812
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2813 TTTTGGGTTTGCTTTGTCTATAACAAAAAATAAATACAACAACTTAATAATCACATTTGAAAACAAATTTAACA 2886
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2887 AGTATAATGTGAGTTTTTCTTTTTTCCTAACTTCCTCAGGACCTAGGTCACCTTTATTAAAAGGAAGAATTCAC 2960
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2961 TCTTTTTTCCTTGGCAGTTTAATCATTCAGGAATCCCTCTCTTAAAGGAAATTGTTATTTTATTCATGTAACCT 3034
Query 418 ---------------------------------------------- 417
Sbjct 3035 TTTTTTGTAATCAAAAGTGAATAAAAACGATCTTTTTGTCTTACAG 3080
