Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16128
- Subject:
- NM_001145195.2
- Aligned Length:
- 2073
- Identities:
- 1206
- Gaps:
- 861
Alignment
Query 1 ATGTGCTTCCGGACAAAGCTCTCAGTATCCTGGGTGCCATTGTTTCTTCTACTCAGCCGTGTTTTTTCTACTGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTGCTTCCGGACAAAGCTCTCAGTATCCTGGGTGCCATTGTTTCTTCTACTCAGCCGTGTTTTTTCTACTGA 74
Query 75 GACAGACAAACCCTCAGCCCAGGACAGCAGAAGCCGTGGGAGTTCAGGCCAACCGGCAGACCTGCTACAGGTTC 148
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GACAGACAAACCCTCAGCCCAGGATAGCAGAAGCCGTGGGAGTTCAGGCCAACCGGCAGACCTGCTACAGGTTC 148
Query 149 TCTCTGCTGGTGACCACCCACCCCACAACCACTCAAGAAGCCTCATCAAAACATTGTTGGAGAAAACTGGGTGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTCTGCTGGTGACCACCCACCCCACAACCACTCAAGAAGCCTCATCAAAACATTGTTGGAGAAAACTGGGTGC 222
Query 223 CCACGGAGGAGAAACGGAATGCAAGGAGATTGCAATCTGTGCTTTGAACCAGATGCACTATTACTAATAGCTGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCACGGAGGAGAAACGGAATGCAAGGAGATTGCAATCTGTGCTTTGAACCAGATGCACTATTACTAATAGCTGG 296
Query 297 AGGAAATTTTGAAGATCAGCTTAGAGAAGAAGTGGTCCAGAGAGTTTCTCTTCTCCTTCTCTATTACATTATTC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGAAATTTTGAAGATCAGCTTAGAGAAGAAGTGGTCCAGAGAGTTTCTCTTCTCCTTCTCTATTACATTATTC 370
Query 371 ATCAGGAAGAGATCTGTTCTTCAAAGCTCAACATGAGTAATAAAGAGTATAAATTTTACCTACACAGCCTACTG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATCAGGAAGAGATCTGTTCTTCAAAGCTCAACATGAGTAATAAAGAGTATAAATTTTACCTACACAGCCTACTG 444
Query 445 AGCCTCAGGCAGGATGAAGATTCCTCTTTCCTTTCACAGAATGAGACAGAAGATATCTTGGCTTTCACCAGGCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCCTCAGGCAGGATGAAGATTCCTCTTTCCTTTCACAGAATGAGACAGAAGATATCTTGGCTTTCACCAGGCA 518
Query 519 GTACTTTGACACTTCTCAAAGCCAGTGTATGGAAACCAAAACGCTGCAGAAAAAATCTGGAATAGTGAGCAGTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTACTTTGACACTTCTCAAAGCCAGTGTATGGAAACCAAAACGCTGCAGAAAAAATCTGGAATAGTGAGCAGTG 592
Query 593 AAGGTGCTAATGAAAGTACGCTTCCTCAGTTGGCAGCCATGATCATTACTTTGTCCCTCCAGGGTGTTTGTCTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAGGTGCTAATGAAAGTACGCTTCCTCAGTTGGCAGCCATGATCATTACTTTGTCCCTCCAGGGTGTTTGTCTG 666
Query 667 GGACAAGGAAACTTGCCTTCACCAGACTACTTTACAGAATATATTTTCAGTTCCTTGAATCGTACGAATACACT 740
||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 667 GGACAAGGAAACTTGCCTTCCCCAGACTACTTTACAGAATATATTTTCAGTTCCTTGAATCGTACGAATACCCT 740
Query 741 CCGCCTATCAGAACTAGACCAACTCCTCAACACTCTCTGGACCAGAAGTACTTGTATCAAAAATGAGAAAATCC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCGCCTATCAGAACTAGACCAACTCCTCAACACTCTCTGGACCAGAAGTACTTGTATCAAAAATGAGAAAATCC 814
Query 815 ATCAATTTCAAAGGAAACAAAACAACATAATAACCCATGATCAGGACTATTCTAATTTCTCTTCATCCATGGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCAATTTCAAAGGAAACAAAACAACATAATAACCCATGATCAGGACTATTCTAATTTCTCTTCATCCATGGAA 888
Query 889 AAAGAGTCTGAGGATGGTCCAATTTCCTGGGATCAGACCTGCTTCTCTGCTAGGCAGCGTGTGGAGATATTTCT 962
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||..||||||||||||||
Sbjct 889 AAAGAGTCTGAGGATGGTCCAGTTTCCTGGGATCAGACCTGCTTCTCTGCTAGGCAGCTGGTGGAGATATTTCT 962
Query 963 ACAGAAGGGCCTCTCACTCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGGATCATC------------- 1023
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACAGAAGGGCCTCTCACTCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGGATCATCCAGCAGCTCCTCA 1036
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1037 GCTGCTCCTGCCACTTACCCAAGGACCAACAAGCAAAGCTGCCACCTACCACTCTGGAGAAATACGGCTACAGC 1110
Query 1024 -------------------------------------------CAGCGCTGGTCCTTTTCCATAGCTGTGAGGA 1054
|||||||||||||||||||||||||||||||
Sbjct 1111 ACGGTGGCTGTCACCCTTCTCACACTGGGCTCCATGCTGGGGACAGCGCTGGTCCTTTTCCATAGCTGTGAGGA 1184
Query 1055 GAACTACAGGCTTATCTTACAGCTGTTTGTGGGCTTGGCCGTCGGGACACTGTCTGGGGACGCTCTGCTCCACC 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAACTACAGGCTTATCTTACAGCTGTTTGTGGGCTTGGCCGTCGGGACACTGTCTGGGGACGCTCTGCTCCACC 1258
Query 1129 TTATCCCTCAGGTTCTTGGTTTACATAAGCAGGAAGCCCCAGAATTTGGGCATTTCCATGAAAGCAAAGGTCAT 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTATCCCTCAGGTTCTTGGTTTACATAAGCAGGAAGCCCCAGAATTTGGGCATTTCCATGAAAGCAAAGGTCAT 1332
Query 1203 ATTTGGAAAC---------------------------------------------------------------- 1212
||||||||||
Sbjct 1333 ATTTGGAAACTGATGGGATTAATTGGAGGCATCCATGGATTTTTCTTGATAGAAAAATGTTTTATTCTTCTTGT 1406
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1407 ATCACCAAATGACAAGCAGGGCCTGTCATTGGTTAATGGGCACGTGGGTCATTCCCACCATCTTGCACTCAACT 1480
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1481 CTGAATTAAGTGACCAGGCAGGCAGAGGCAAATCTGCTTCAACTATCCAGTTGAAAAGCCCAGAAGATTCACAG 1554
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1555 GCAGCTGAAATGCCTATAGGCAGTATGACAGCCTCCAACAGAAAATGTAAAGCCATTAGCTTGTTAGCAATCAT 1628
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1629 GATTCTGGTTGGGGACAGCCTGCATAATTTTGCAGATGGCCTAGCCATAGGAGCAGCCTTCTCATCATCATCCG 1702
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1703 AGTCAGGAGTGACCACTACGATTGCTATCTTGTGTCATGAAATCCCACATGAAATGGGAGACTTTGCCGTGCTC 1776
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1777 TTAAGCTCTGGACTTTCTATGAAGACTGCCATCCTGATGAATTTTATAAGCTCCCTAACTGCCTTCATGGGATT 1850
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1851 ATACATTGGCCTTTCCGTGTCAGCTGATCCATGTGTTCAAGACTGGATCTTCACAGTCACTGCTGGGATGTTCT 1924
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1925 TATATTTATCCTTGGTTGAAATGCTTCCTGAAATGACTCATGTTCAAACACAACGACCCTGGATGATGTTTCTC 1998
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1999 CTGCAAAACTTTGGATTGATCCTAGGTTGGCTTTCTCTCCTGCTCTTGGCTATATATGAGCAAAATATTAAAAT 2072
Query 1213 - 1212
Sbjct 2073 A 2073
