Construct: shRNA TRCN0000218013
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_001001824.1-632s21c1
- DNA Barcode:
- CCATGTCTGTTTCAACTAAAG
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Gm12372 (545600)
- Gene Description:
- predicted gene 12372
- Transcript:
- RefSeq XM_001001824.1 (NON-CURRENT)
- Match location:
- Position 632 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000218013)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCATGTCTGTTTCAACTAAAG
- Hairpin Sequence:
-
5'-CCGG-CCATGTCTGTTTCAACTAAAG-CTCGAG-CTTTAGTTGAAACAGACATGG-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCATGTCTGTTTCAACTAAAGCTCGAGCTTTAGTTGAAACAGACATGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCATGTCTGTTTCAACTAAAGCTCGAGCTTTAGTTGAAACAGACATGG-3'
Other clones with same target sequence:
(none)
